RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 C3P01024 1663 aa24.1■■□□□ 1.45
TPM1-205ENST00000357980 RPGRIP1LQ68CZ1 1315 aa24.09■■□□□ 1.45
TPM1-205ENST00000357980 CARD11Q9BXL7 1154 aa24.07■■□□□ 1.44
TPM1-205ENST00000357980 NBPF1Q3BBV0 1214 aa24.07■■□□□ 1.44
TPM1-205ENST00000357980 ADGRF5Q8IZF2 1346 aa24.05■■□□□ 1.44
TPM1-205ENST00000357980 POLR1AO95602 1720 aaPredicted RBP24.05■■□□□ 1.44
TPM1-205ENST00000357980 PIK3C2GO75747 1445 aa24.03■■□□□ 1.44
TPM1-205ENST00000357980 KDM5AP29375 1690 aaKnown RBP24.03■■□□□ 1.44
TPM1-205ENST00000357980 TNRQ92752 1358 aa24.03■■□□□ 1.44
TPM1-205ENST00000357980 ADAMTSL3P82987 1691 aa24.03■■□□□ 1.44
TPM1-205ENST00000357980 IQGAP1P46940 1657 aa24.02■■□□□ 1.44
TPM1-205ENST00000357980 A2ML1A8K2U0 1454 aa24.02■■□□□ 1.44
TPM1-205ENST00000357980 ZFYVE9O95405 1425 aa24.01■■□□□ 1.43
TPM1-205ENST00000357980 RIMS1Q86UR5 1692 aaKnown RBP23.98■■□□□ 1.43
TPM1-205ENST00000357980 UBR1Q8IWV7 1749 aa23.97■■□□□ 1.43
TPM1-205ENST00000357980 SETBP1Q9Y6X0 1596 aa23.97■■□□□ 1.43
TPM1-205ENST00000357980 WASHC2AQ641Q2 1341 aa23.96■■□□□ 1.43
TPM1-205ENST00000357980 NLRP1Q9C000 1473 aa23.96■■□□□ 1.43
TPM1-205ENST00000357980 VGFO15240 615 aaPredicted RBP23.96■■□□□ 1.43
TPM1-205ENST00000357980 CEBPAP49715 358 aaPredicted RBP23.96■■□□□ 1.43
TPM1-205ENST00000357980 CFAP70Q5T0N1 1121 aa23.94■■□□□ 1.42
TPM1-205ENST00000357980 C11orf95C9JLR9 678 aaPredicted RBP23.94■■□□□ 1.42
TPM1-205ENST00000357980 ST20-MTHFSA0A0A6YYL1 179 aa23.93■■□□□ 1.42
TPM1-205ENST00000357980 STAG3Q9UJ98 1225 aa23.93■■□□□ 1.42
TPM1-205ENST00000357980 SCAF11Q99590 1463 aaKnown RBP23.93■■□□□ 1.42
TPM1-205ENST00000357980 CCDC7Q96M83 1385 aa23.92■■□□□ 1.42
TPM1-205ENST00000357980 ADGRB1O14514 1584 aa23.92■■□□□ 1.42
TPM1-205ENST00000357980 C14orf93Q9H972 538 aaKnown RBP23.91■■□□□ 1.42
TPM1-205ENST00000357980 DDX10Q13206 875 aaKnown RBP23.9■■□□□ 1.42
TPM1-205ENST00000357980 NUTM2DQ5VT03 806 aaPredicted RBP23.9■■□□□ 1.42
TPM1-205ENST00000357980 RIMS2Q9UQ26 1411 aa23.89■■□□□ 1.42
TPM1-205ENST00000357980 MYO3AQ8NEV4 1616 aa23.89■■□□□ 1.41
TPM1-205ENST00000357980 KIF7Q2M1P5 1343 aa23.88■■□□□ 1.41
TPM1-205ENST00000357980 TESK2Q96S53 571 aa23.84■■□□□ 1.41
TPM1-205ENST00000357980 ASXL1Q8IXJ9 1541 aa23.83■■□□□ 1.41
TPM1-205ENST00000357980 TMEM2Q9UHN6 1383 aa23.83■■□□□ 1.4
TPM1-205ENST00000357980 SETD1AO15047 1707 aaKnown RBP23.82■■□□□ 1.4
TPM1-205ENST00000357980 EIF3AQ14152 1382 aaKnown RBP23.82■■□□□ 1.4
TPM1-205ENST00000357980 ALKQ9UM73 1620 aa23.82■■□□□ 1.4
TPM1-205ENST00000357980 NRXN3Q9Y4C0 1643 aa23.81■■□□□ 1.4
TPM1-205ENST00000357980 PLPPR3Q6T4P5 718 aa23.8■■□□□ 1.4
TPM1-205ENST00000357980 MIER1Q8N108 512 aa23.8■■□□□ 1.4
TPM1-205ENST00000357980 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.79■■□□□ 1.4
TPM1-205ENST00000357980 CEP170BQ9Y4F5 1589 aaPredicted RBP23.79■■□□□ 1.4
TPM1-205ENST00000357980 SLIT1O75093 1534 aa23.78■■□□□ 1.4
TPM1-205ENST00000357980 ZNF142P52746 1687 aaPredicted RBP23.78■■□□□ 1.4
TPM1-205ENST00000357980 ARHGAP23Q9P227 1491 aa23.78■■□□□ 1.4
TPM1-205ENST00000357980 ARHGEF28Q8N1W1 1705 aaKnown RBP23.77■■□□□ 1.4
TPM1-205ENST00000357980 TMEM132EQ6IEE7 984 aa23.77■■□□□ 1.4
TPM1-205ENST00000357980 SETD1BQ9UPS6 1966 aaKnown RBP23.76■■□□□ 1.39
TPM1-205ENST00000357980 PTPRMP28827 1452 aa23.76■■□□□ 1.39
TPM1-205ENST00000357980 DISP3Q9P2K9 1392 aa23.76■■□□□ 1.39
TPM1-205ENST00000357980 HDGFP51858 240 aaKnown RBP23.74■■□□□ 1.39
TPM1-205ENST00000357980 QRICH2Q9H0J4 1663 aa23.73■■□□□ 1.39
TPM1-205ENST00000357980 SBNO2Q9Y2G9 1366 aa23.72■■□□□ 1.39
TPM1-205ENST00000357980 TMF1P82094 1093 aa23.7■■□□□ 1.38
TPM1-205ENST00000357980 SENP3Q9H4L4 574 aaPredicted RBP23.7■■□□□ 1.38
TPM1-205ENST00000357980 TRAK1Q9UPV9 953 aa23.7■■□□□ 1.38
TPM1-205ENST00000357980 YTHDC2Q9H6S0 1430 aaKnown RBP23.69■■□□□ 1.38
TPM1-205ENST00000357980 THEMISQ8N1K5 641 aaPredicted RBP23.69■■□□□ 1.38
TPM1-205ENST00000357980 PLEKHG1Q9ULL1 1385 aa23.68■■□□□ 1.38
TPM1-205ENST00000357980 LTKP29376 864 aa23.68■■□□□ 1.38
TPM1-205ENST00000357980 CENPJQ9HC77 1338 aaPredicted RBP23.68■■□□□ 1.38
TPM1-205ENST00000357980 POLR3GLQ9BT43 218 aa23.66■■□□□ 1.38
TPM1-205ENST00000357980 ADAMTS13Q76LX8 1427 aa23.65■■□□□ 1.38
TPM1-205ENST00000357980 SLC24A1O60721 1099 aa23.64■■□□□ 1.38
TPM1-205ENST00000357980 TXNDC2Q86VQ3 553 aa23.64■■□□□ 1.38
TPM1-205ENST00000357980 EID1Q9Y6B2 187 aa23.63■■□□□ 1.37
TPM1-205ENST00000357980 DLC1Q96QB1 1528 aa23.63■■□□□ 1.37
TPM1-205ENST00000357980 MED14O60244 1454 aa23.63■■□□□ 1.37
TPM1-205ENST00000357980 KNDC1Q76NI1 1749 aa23.62■■□□□ 1.37
TPM1-205ENST00000357980 METP08581 1390 aa23.62■■□□□ 1.37
TPM1-205ENST00000357980 LRPPRCP42704 1394 aaKnown RBP23.62■■□□□ 1.37
TPM1-205ENST00000357980 MYOM1P52179 1685 aa23.62■■□□□ 1.37
TPM1-205ENST00000357980 STK26Q9P289 416 aa23.6■■□□□ 1.37
TPM1-205ENST00000357980 CDCA8Q53HL2 280 aa23.59■■□□□ 1.37
TPM1-205ENST00000357980 ABCC11Q96J66 1382 aa23.59■■□□□ 1.37
TPM1-205ENST00000357980 ANP32CO43423 234 aa23.59■■□□□ 1.37
TPM1-205ENST00000357980 DIP2AQ14689 1571 aa23.58■■□□□ 1.37
TPM1-205ENST00000357980 TECPR2O15040 1411 aa23.57■■□□□ 1.36
TPM1-205ENST00000357980 TULP4Q9NRJ4 1543 aa23.56■■□□□ 1.36
TPM1-205ENST00000357980 CPS1P31327 1500 aa23.56■■□□□ 1.36
TPM1-205ENST00000357980 BCANQ96GW7 911 aa23.54■■□□□ 1.36
TPM1-205ENST00000357980 PRAM1Q96QH2 718 aa23.53■■□□□ 1.36
TPM1-205ENST00000357980 FAM135BQ49AJ0 1406 aa23.5■■□□□ 1.35
TPM1-205ENST00000357980 TBX22Q9Y458 520 aa23.5■■□□□ 1.35
TPM1-205ENST00000357980 KDM4FA0A1W2PPD8 638 aa23.49■■□□□ 1.35
TPM1-205ENST00000357980 SLC26A8Q96RN1 970 aa23.49■■□□□ 1.35
TPM1-205ENST00000357980 SAFB2Q14151 953 aaKnown RBP eCLIP23.48■■□□□ 1.35
TPM1-205ENST00000357980 ANKLE2Q86XL3 938 aa23.48■■□□□ 1.35
TPM1-205ENST00000357980 SIRT1Q96EB6 747 aa23.48■■□□□ 1.35
TPM1-205ENST00000357980 POGKQ9P215 609 aa23.48■■□□□ 1.35
TPM1-205ENST00000357980 PTPRUQ92729 1446 aa23.48■■□□□ 1.35
TPM1-205ENST00000357980 PLEKHH1Q9ULM0 1364 aa23.48■■□□□ 1.35
TPM1-205ENST00000357980 EVC2Q86UK5 1308 aa23.48■■□□□ 1.35
TPM1-205ENST00000357980 PUS7Q96PZ0 661 aaKnown RBP23.47■■□□□ 1.35
TPM1-205ENST00000357980 PRKRIP1Q9H875 184 aaPredicted RBP23.47■■□□□ 1.35
TPM1-205ENST00000357980 PER1O15534 1290 aaPredicted RBP23.47■■□□□ 1.35
TPM1-205ENST00000357980 CCER2I3L3R5 266 aa23.46■■□□□ 1.35
TPM1-205ENST00000357980 PANK3Q9H999 370 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms