RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 ZNF428Q96B54 188 aa12.85□□□□□ -0.35
FXR1-202ENST00000357559 IFT57Q9NWB7 429 aa12.85□□□□□ -0.35
FXR1-202ENST00000357559 HDAC5Q9UQL6 1122 aa12.85□□□□□ -0.35
FXR1-202ENST00000357559 TTC5Q8N0Z6 440 aa12.85□□□□□ -0.35
FXR1-202ENST00000357559 TERF2IPQ9NYB0 399 aa12.84□□□□□ -0.35
FXR1-202ENST00000357559 ANKRD62A6NC57 917 aa12.83□□□□□ -0.35
FXR1-202ENST00000357559 TRAK1Q9UPV9 953 aa12.83□□□□□ -0.36
FXR1-202ENST00000357559 STK11IPQ8N1F8 1099 aa12.83□□□□□ -0.36
FXR1-202ENST00000357559 HOOK1Q9UJC3 728 aaKnown RBP12.83□□□□□ -0.36
FXR1-202ENST00000357559 RBM33Q96EV2 1170 aaKnown RBP12.83□□□□□ -0.36
FXR1-202ENST00000357559 TRDNQ13061 729 aa12.82□□□□□ -0.36
FXR1-202ENST00000357559 IFIT2P09913 472 aaKnown RBP12.82□□□□□ -0.36
FXR1-202ENST00000357559 SASS6Q6UVJ0 657 aa12.82□□□□□ -0.36
FXR1-202ENST00000357559 ATP6V1DQ9Y5K8 247 aa12.82□□□□□ -0.36
FXR1-202ENST00000357559 EIF3AQ14152 1382 aaKnown RBP12.82□□□□□ -0.36
FXR1-202ENST00000357559 FAM177BA6PVY3 158 aa12.82□□□□□ -0.36
FXR1-202ENST00000357559 H0YHG0 523 aa12.81□□□□□ -0.36
FXR1-202ENST00000357559 BRPF1P55201 1214 aaPredicted RBP12.81□□□□□ -0.36
FXR1-202ENST00000357559 OFD1O75665 1012 aa12.81□□□□□ -0.36
FXR1-202ENST00000357559 NEFHP12036 1026 aa12.81□□□□□ -0.36
FXR1-202ENST00000357559 CPLX2Q6PUV4 134 aaKnown RBP12.81□□□□□ -0.36
FXR1-202ENST00000357559 MNS1Q8NEH6 495 aa12.8□□□□□ -0.36
FXR1-202ENST00000357559 NEXNQ0ZGT2 675 aa12.8□□□□□ -0.36
FXR1-202ENST00000357559 CCAR1Q8IX12 1150 aaKnown RBP12.8□□□□□ -0.36
FXR1-202ENST00000357559 LMOD3Q0VAK6 560 aa12.8□□□□□ -0.36
FXR1-202ENST00000357559 RALBP1Q15311 655 aa12.8□□□□□ -0.36
FXR1-202ENST00000357559 TEFQ10587 303 aa12.79□□□□□ -0.36
FXR1-202ENST00000357559 HSP90AB3PQ58FF7 597 aa12.79□□□□□ -0.36
FXR1-202ENST00000357559 CHMP4AQ9BY43 222 aa12.79□□□□□ -0.36
FXR1-202ENST00000357559 AIMP1Q12904 312 aaKnown RBP12.79□□□□□ -0.36
FXR1-202ENST00000357559 RSPH6AQ9H0K4 717 aa12.79□□□□□ -0.36
FXR1-202ENST00000357559 CCDC97Q96F63 343 aaPredicted RBP12.79□□□□□ -0.36
FXR1-202ENST00000357559 NOM1Q5C9Z4 860 aaKnown RBP12.78□□□□□ -0.36
FXR1-202ENST00000357559 NEUROD6Q96NK8 337 aa12.78□□□□□ -0.36
FXR1-202ENST00000357559 CCDC191Q8NCU4 936 aa12.78□□□□□ -0.36
FXR1-202ENST00000357559 PPM1FP49593 454 aaPredicted RBP12.78□□□□□ -0.36
FXR1-202ENST00000357559 CDR1P51861 262 aa12.77□□□□□ -0.36
FXR1-202ENST00000357559 WWC2Q6AWC2 1192 aa12.77□□□□□ -0.36
FXR1-202ENST00000357559 ZKSCAN1P17029 563 aaPredicted RBP12.77□□□□□ -0.36
FXR1-202ENST00000357559 WASHC4Q2M389 1173 aa12.77□□□□□ -0.37
FXR1-202ENST00000357559 KIF3BO15066 747 aa12.77□□□□□ -0.37
FXR1-202ENST00000357559 AEBP2Q6ZN18 517 aaPredicted RBP12.77□□□□□ -0.37
FXR1-202ENST00000357559 KIF27Q86VH2 1401 aa12.77□□□□□ -0.37
FXR1-202ENST00000357559 CRBNQ96SW2 442 aa12.77□□□□□ -0.37
FXR1-202ENST00000357559 LRRFIP1Q32MZ4 808 aaKnown RBP12.77□□□□□ -0.37
FXR1-202ENST00000357559 ARHGAP35Q9NRY4 1499 aa12.76□□□□□ -0.37
FXR1-202ENST00000357559 ATP2B2Q01814 1243 aa12.76□□□□□ -0.37
FXR1-202ENST00000357559 COG6Q9Y2V7 657 aa12.76□□□□□ -0.37
FXR1-202ENST00000357559 NUP155O75694 1391 aa12.76□□□□□ -0.37
FXR1-202ENST00000357559 ATP2B1P20020 1258 aa12.76□□□□□ -0.37
FXR1-202ENST00000357559 GSE1Q14687 1217 aa12.76□□□□□ -0.37
FXR1-202ENST00000357559 CCER2I3L3R5 266 aa12.76□□□□□ -0.37
FXR1-202ENST00000357559 HSP90B2PQ58FF3 399 aa12.76□□□□□ -0.37
FXR1-202ENST00000357559 CCDC173Q0VFZ6 552 aa12.76□□□□□ -0.37
FXR1-202ENST00000357559 RUFY2Q8WXA3 655 aa12.76□□□□□ -0.37
FXR1-202ENST00000357559 OLFM4Q6UX06 510 aa12.75□□□□□ -0.37
FXR1-202ENST00000357559 RDXP35241 583 aaKnown RBP12.75□□□□□ -0.37
FXR1-202ENST00000357559 ENOX2Q16206 610 aaKnown RBP12.75□□□□□ -0.37
FXR1-202ENST00000357559 TSHZ2Q9NRE2 1034 aa12.75□□□□□ -0.37
FXR1-202ENST00000357559 SMC3Q9UQE7 1217 aa12.75□□□□□ -0.37
FXR1-202ENST00000357559 CGNL1Q0VF96 1302 aa12.75□□□□□ -0.37
FXR1-202ENST00000357559 FAM161AQ3B820 660 aa12.75□□□□□ -0.37
FXR1-202ENST00000357559 SAFBQ15424 915 aaKnown RBP eCLIP12.74□□□□□ -0.37
FXR1-202ENST00000357559 WASHC2CQ9Y4E1 1318 aa12.74□□□□□ -0.37
FXR1-202ENST00000357559 HNRNPMP52272 730 aaKnown RBP eCLIP12.74□□□□□ -0.376e-6■■■■□ 20.3
FXR1-202ENST00000357559 CEBPZQ03701 1054 aaKnown RBP12.74□□□□□ -0.37
FXR1-202ENST00000357559 COG3Q96JB2 828 aa12.74□□□□□ -0.37
FXR1-202ENST00000357559 SKOR2Q2VWA4 1001 aaPredicted RBP12.74□□□□□ -0.37
FXR1-202ENST00000357559 SMC2O95347 1197 aa12.74□□□□□ -0.37
FXR1-202ENST00000357559 G3BP1Q13283 466 aaKnown RBP eCLIP12.74□□□□□ -0.375e-6■■□□□ 11.9
FXR1-202ENST00000357559 CHMP4CQ96CF2 233 aa12.74□□□□□ -0.37
FXR1-202ENST00000357559 TSPYL1Q9H0U9 437 aa12.73□□□□□ -0.37
FXR1-202ENST00000357559 NUTM2GQ5VZR2 741 aa12.73□□□□□ -0.37
FXR1-202ENST00000357559 SEPT7Q16181 437 aaKnown RBP12.73□□□□□ -0.37
FXR1-202ENST00000357559 FMNL2Q96PY5 1086 aa12.73□□□□□ -0.37
FXR1-202ENST00000357559 CENPHQ9H3R5 247 aa12.73□□□□□ -0.37
FXR1-202ENST00000357559 SETD5Q9C0A6 1442 aa12.73□□□□□ -0.37
FXR1-202ENST00000357559 DCTN1Q14203 1278 aa12.72□□□□□ -0.37
FXR1-202ENST00000357559 ARGLU1Q9NWB6 273 aaPredicted RBP12.72□□□□□ -0.37
FXR1-202ENST00000357559 SYCP1Q15431 976 aa12.72□□□□□ -0.37
FXR1-202ENST00000357559 AXDND1Q5T1B0 1012 aaPredicted RBP12.72□□□□□ -0.37
FXR1-202ENST00000357559 MAPK8IP2Q13387 824 aaPredicted RBP12.72□□□□□ -0.37
FXR1-202ENST00000357559 RNF214Q8ND24 703 aa12.72□□□□□ -0.37
FXR1-202ENST00000357559 ACBD3Q9H3P7 528 aa12.72□□□□□ -0.37
FXR1-202ENST00000357559 CDK5RAP3Q96JB5 506 aa12.72□□□□□ -0.37
FXR1-202ENST00000357559 MPHOSPH9Q99550 1183 aa12.72□□□□□ -0.37
FXR1-202ENST00000357559 PSME1Q06323 249 aa12.72□□□□□ -0.37
FXR1-202ENST00000357559 BRMS1Q9HCU9 246 aa12.72□□□□□ -0.37
FXR1-202ENST00000357559 ZHX3Q9H4I2 956 aa12.71□□□□□ -0.37
FXR1-202ENST00000357559 FKBP5Q13451 457 aaPredicted RBP12.71□□□□□ -0.37
FXR1-202ENST00000357559 RALYLQ86SE5 291 aaKnown RBP12.71□□□□□ -0.37
FXR1-202ENST00000357559 CCDC73Q6ZRK6 1079 aa12.71□□□□□ -0.37
FXR1-202ENST00000357559 DCAF8L1A6NGE4 600 aa12.71□□□□□ -0.38
FXR1-202ENST00000357559 MINK1Q8N4C8 1332 aaPredicted RBP12.71□□□□□ -0.38
FXR1-202ENST00000357559 PDE4AP27815 886 aa12.71□□□□□ -0.38
FXR1-202ENST00000357559 RNF20Q5VTR2 975 aa12.71□□□□□ -0.38
FXR1-202ENST00000357559 EXOC6Q8TAG9 804 aa12.71□□□□□ -0.38
FXR1-202ENST00000357559 SPC24Q8NBT2 197 aa12.7□□□□□ -0.38
FXR1-202ENST00000357559 KRT18P05783 430 aaKnown RBP12.7□□□□□ -0.38
FXR1-202ENST00000357559 CEP164Q9UPV0 1460 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms