RNA–Protein interactions for RNA: ENST00000357508.5

C1orf228-201, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 1 (best)

Gene C1orf228, Length 2,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-201ENST00000357508 MYOM2P54296 1465 aa35.66■■■■□ 3.3
C1orf228-201ENST00000357508 CAMSAP1Q5T5Y3 1602 aa35.63■■■■□ 3.29
C1orf228-201ENST00000357508 ADGRB3O60242 1522 aa35.61■■■■□ 3.29
C1orf228-201ENST00000357508 ZC3H13Q5T200 1668 aaKnown RBP35.61■■■■□ 3.29
C1orf228-201ENST00000357508 CNGB1Q14028 1251 aaPredicted RBP35.61■■■■□ 3.29
C1orf228-201ENST00000357508 SCAF11Q99590 1463 aaKnown RBP35.6■■■■□ 3.29
C1orf228-201ENST00000357508 KTN1Q86UP2 1357 aaKnown RBP35.59■■■■□ 3.29
C1orf228-201ENST00000357508 MLECQ14165 292 aa35.59■■■■□ 3.29
C1orf228-201ENST00000357508 TMF1P82094 1093 aa35.57■■■■□ 3.28
C1orf228-201ENST00000357508 PPP6R1Q9UPN7 881 aa35.56■■■■□ 3.28
C1orf228-201ENST00000357508 ARHGAP31Q2M1Z3 1444 aa35.55■■■■□ 3.28
C1orf228-201ENST00000357508 NRXN1Q9ULB1 1477 aa35.52■■■■□ 3.28
C1orf228-201ENST00000357508 PPLO60437 1756 aa35.52■■■■□ 3.28
C1orf228-201ENST00000357508 RALBP1Q15311 655 aa35.51■■■■□ 3.27
C1orf228-201ENST00000357508 ZBED9Q6R2W3 1325 aa35.49■■■■□ 3.27
C1orf228-201ENST00000357508 ADGRF5Q8IZF2 1346 aa35.48■■■■□ 3.27
C1orf228-201ENST00000357508 PER1O15534 1290 aaPredicted RBP35.48■■■■□ 3.27
C1orf228-201ENST00000357508 NOS1P29475 1434 aa35.48■■■■□ 3.27
C1orf228-201ENST00000357508 FKBP8Q14318 412 aa35.48■■■■□ 3.27
C1orf228-201ENST00000357508 MYBBP1AQ9BQG0 1328 aaKnown RBP35.47■■■■□ 3.27
C1orf228-201ENST00000357508 PIK3C2BO00750 1634 aa35.45■■■■□ 3.27
C1orf228-201ENST00000357508 PARD3Q8TEW0 1356 aa35.45■■■■□ 3.27
C1orf228-201ENST00000357508 BRD4O60885 1362 aaPredicted RBP35.44■■■■□ 3.26
C1orf228-201ENST00000357508 EIF3AQ14152 1382 aaKnown RBP35.44■■■■□ 3.26
C1orf228-201ENST00000357508 CLTCQ00610 1675 aaKnown RBP35.44■■■■□ 3.26
C1orf228-201ENST00000357508 NEFLP07196 543 aa35.43■■■■□ 3.26
C1orf228-201ENST00000357508 SYNMO15061 1565 aa35.43■■■■□ 3.26
C1orf228-201ENST00000357508 CFAP70Q5T0N1 1121 aa35.42■■■■□ 3.26
C1orf228-201ENST00000357508 TMC1Q8TDI8 760 aa35.41■■■■□ 3.26
C1orf228-201ENST00000357508 PNISRQ8TF01 805 aaKnown RBP35.41■■■■□ 3.26
C1orf228-201ENST00000357508 PANK3Q9H999 370 aa35.39■■■■□ 3.26
C1orf228-201ENST00000357508 FBXO31Q5XUX0 539 aaPredicted RBP35.38■■■■□ 3.25
C1orf228-201ENST00000357508 SETBP1Q9Y6X0 1596 aa35.38■■■■□ 3.25
C1orf228-201ENST00000357508 CHGAP10645 457 aaKnown RBP35.37■■■■□ 3.25
C1orf228-201ENST00000357508 MYOM1P52179 1685 aa35.37■■■■□ 3.25
C1orf228-201ENST00000357508 MYO3AQ8NEV4 1616 aa35.36■■■■□ 3.25
C1orf228-201ENST00000357508 KDM5AP29375 1690 aaKnown RBP35.35■■■■□ 3.25
C1orf228-201ENST00000357508 PREX1Q8TCU6 1659 aa35.35■■■■□ 3.25
C1orf228-201ENST00000357508 ESF1Q9H501 851 aaKnown RBP35.35■■■■□ 3.25
C1orf228-201ENST00000357508 LRPPRCP42704 1394 aaKnown RBP35.33■■■■□ 3.25
C1orf228-201ENST00000357508 CDCA8Q53HL2 280 aa35.33■■■■□ 3.25
C1orf228-201ENST00000357508 PIK3C2GO75747 1445 aa35.32■■■■□ 3.25
C1orf228-201ENST00000357508 ERVK-7P63135 1459 aa35.31■■■■□ 3.24
C1orf228-201ENST00000357508 RPGRIP1LQ68CZ1 1315 aa35.3■■■■□ 3.24
C1orf228-201ENST00000357508 NLRP13Q86W25 1043 aa35.3■■■■□ 3.24
C1orf228-201ENST00000357508 ZMYM3Q14202 1370 aa35.3■■■■□ 3.24
C1orf228-201ENST00000357508 IDI1Q13907 227 aa35.29■■■■□ 3.24
C1orf228-201ENST00000357508 BCANQ96GW7 911 aa35.27■■■■□ 3.24
C1orf228-201ENST00000357508 SLC52A1Q9NWF4 448 aa35.27■■■■□ 3.24
C1orf228-201ENST00000357508 NEXMIFQ5QGS0 1516 aa35.25■■■■□ 3.23
C1orf228-201ENST00000357508 ADGRB1O14514 1584 aa35.24■■■■□ 3.23
C1orf228-201ENST00000357508 CC2D1BQ5T0F9 858 aaKnown RBP35.24■■■■□ 3.23
C1orf228-201ENST00000357508 PELP1Q8IZL8 1130 aaKnown RBP35.23■■■■□ 3.23
C1orf228-201ENST00000357508 MYO5BQ9ULV0 1848 aa35.22■■■■□ 3.23
C1orf228-201ENST00000357508 SPATA31D1Q6ZQQ2 1576 aa35.21■■■■□ 3.23
C1orf228-201ENST00000357508 C14orf93Q9H972 538 aaKnown RBP35.21■■■■□ 3.23
C1orf228-201ENST00000357508 SLC24A1O60721 1099 aa35.21■■■■□ 3.23
C1orf228-201ENST00000357508 SBNO2Q9Y2G9 1366 aa35.2■■■■□ 3.22
C1orf228-201ENST00000357508 QRICH2Q9H0J4 1663 aa35.16■■■■□ 3.22
C1orf228-201ENST00000357508 SMG6Q86US8 1419 aaKnown RBP35.15■■■■□ 3.22
C1orf228-201ENST00000357508 TMEM131LA2VDJ0 1609 aa35.14■■■■□ 3.22
C1orf228-201ENST00000357508 KNSTRNQ9Y448 316 aa35.14■■■■□ 3.22
C1orf228-201ENST00000357508 ASXL1Q8IXJ9 1541 aa35.13■■■■□ 3.22
C1orf228-201ENST00000357508 CENPJQ9HC77 1338 aaPredicted RBP35.11■■■■□ 3.21
C1orf228-201ENST00000357508 AMER1Q5JTC6 1135 aaPredicted RBP35.1■■■■□ 3.21
C1orf228-201ENST00000357508 VGFO15240 615 aaPredicted RBP35.09■■■■□ 3.21
C1orf228-201ENST00000357508 CEBPAP49715 358 aaPredicted RBP35.08■■■■□ 3.21
C1orf228-201ENST00000357508 FER1L4A9Z1Z3 1794 aa35.07■■■■□ 3.21
C1orf228-201ENST00000357508 ZFYVE9O95405 1425 aa35.07■■■■□ 3.2
C1orf228-201ENST00000357508 ARHGEF28Q8N1W1 1705 aaKnown RBP35.07■■■■□ 3.2
C1orf228-201ENST00000357508 TRAK1Q9UPV9 953 aa35.06■■■■□ 3.2
C1orf228-201ENST00000357508 NPC1L1Q9UHC9 1359 aa35.05■■■■□ 3.2
C1orf228-201ENST00000357508 TMEM132EQ6IEE7 984 aa35.04■■■■□ 3.2
C1orf228-201ENST00000357508 NUDCQ9Y266 331 aa35.04■■■■□ 3.2
C1orf228-201ENST00000357508 TNRQ92752 1358 aa35.03■■■■□ 3.2
C1orf228-201ENST00000357508 INSRP06213 1382 aa35.03■■■■□ 3.2
C1orf228-201ENST00000357508 NUTM2DQ5VT03 806 aaPredicted RBP35.03■■■■□ 3.2
C1orf228-201ENST00000357508 IRX6P78412 446 aaPredicted RBP35.02■■■■□ 3.2
C1orf228-201ENST00000357508 STAG3Q9UJ98 1225 aa35.02■■■■□ 3.2
C1orf228-201ENST00000357508 SENP3-EIF4A1A0A087X0R7 540 aa35■■■■□ 3.19
C1orf228-201ENST00000357508 C3P01024 1663 aa34.99■■■■□ 3.19
C1orf228-201ENST00000357508 BLMP54132 1417 aaPredicted RBP34.98■■■■□ 3.19
C1orf228-201ENST00000357508 ERICH6BQ5W0A0 696 aa34.97■■■■□ 3.19
C1orf228-201ENST00000357508 A2ML1A8K2U0 1454 aa34.97■■■■□ 3.19
C1orf228-201ENST00000357508 PPP2R1AP30153 589 aa34.97■■■■□ 3.19
C1orf228-201ENST00000357508 PLPPR3Q6T4P5 718 aa34.96■■■■□ 3.19
C1orf228-201ENST00000357508 CARD14Q9BXL6 1004 aa34.9■■■■□ 3.18
C1orf228-201ENST00000357508 ADAMTSL3P82987 1691 aa34.88■■■■□ 3.17
C1orf228-201ENST00000357508 RIMS1Q86UR5 1692 aaKnown RBP34.87■■■■□ 3.17
C1orf228-201ENST00000357508 TULP4Q9NRJ4 1543 aa34.86■■■■□ 3.17
C1orf228-201ENST00000357508 RNF123Q5XPI4 1314 aa34.84■■■■□ 3.17
C1orf228-201ENST00000357508 NLRP1Q9C000 1473 aa34.84■■■■□ 3.17
C1orf228-201ENST00000357508 RIMS2Q9UQ26 1411 aa34.83■■■■□ 3.17
C1orf228-201ENST00000357508 SENP3Q9H4L4 574 aaPredicted RBP34.82■■■■□ 3.16
C1orf228-201ENST00000357508 USP32Q8NFA0 1604 aa34.8■■■■□ 3.16
C1orf228-201ENST00000357508 TSHZ2Q9NRE2 1034 aa34.79■■■■□ 3.16
C1orf228-201ENST00000357508 UBR1Q8IWV7 1749 aa34.79■■■■□ 3.16
C1orf228-201ENST00000357508 ALKQ9UM73 1620 aa34.79■■■■□ 3.16
C1orf228-201ENST00000357508 PDE3BQ13370 1112 aa34.79■■■■□ 3.16
C1orf228-201ENST00000357508 PUS7Q96PZ0 661 aaKnown RBP34.79■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms