RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 EFCAB6Q5THR3 1501 aa13.44□□□□□ -0.26
COL4A3BP-202ENST00000357457 SLC52A1Q9NWF4 448 aa13.44□□□□□ -0.26
COL4A3BP-202ENST00000357457 CHIC2Q9UKJ5 165 aa13.44□□□□□ -0.26
COL4A3BP-202ENST00000357457 TMEM94Q12767 1356 aa13.44□□□□□ -0.26
COL4A3BP-202ENST00000357457 SLC26A8Q96RN1 970 aa13.42□□□□□ -0.26
COL4A3BP-202ENST00000357457 PROSER2Q86WR7 435 aaPredicted RBP13.41□□□□□ -0.26
COL4A3BP-202ENST00000357457 ADGRL2O95490 1459 aa13.4□□□□□ -0.26
COL4A3BP-202ENST00000357457 ADGRB3O60242 1522 aa13.39□□□□□ -0.27
COL4A3BP-202ENST00000357457 NWD1Q149M9 1564 aa13.38□□□□□ -0.27
COL4A3BP-202ENST00000357457 RPRD2Q5VT52 1461 aaKnown RBP13.38□□□□□ -0.27
COL4A3BP-202ENST00000357457 ROBO1Q9Y6N7 1651 aa13.37□□□□□ -0.27
COL4A3BP-202ENST00000357457 NKTRP30414 1462 aaKnown RBP13.37□□□□□ -0.27
COL4A3BP-202ENST00000357457 POTEAQ6S8J7 498 aa13.37□□□□□ -0.27
COL4A3BP-202ENST00000357457 RBM33Q96EV2 1170 aaKnown RBP13.37□□□□□ -0.27
COL4A3BP-202ENST00000357457 ZFYVE9O95405 1425 aa13.37□□□□□ -0.27
COL4A3BP-202ENST00000357457 CHD2O14647 1828 aaKnown RBP13.36□□□□□ -0.27
COL4A3BP-202ENST00000357457 HDGFP51858 240 aaKnown RBP13.36□□□□□ -0.27
COL4A3BP-202ENST00000357457 SLC4A1APQ9BWU0 796 aaKnown RBP13.36□□□□□ -0.27
COL4A3BP-202ENST00000357457 SLAIN2Q9P270 581 aa13.36□□□□□ -0.27
COL4A3BP-202ENST00000357457 ANKRD50Q9ULJ7 1429 aa13.36□□□□□ -0.27
COL4A3BP-202ENST00000357457 PLEKHG1Q9ULL1 1385 aa13.35□□□□□ -0.27
COL4A3BP-202ENST00000357457 MYO5BQ9ULV0 1848 aa13.35□□□□□ -0.27
COL4A3BP-202ENST00000357457 TBX22Q9Y458 520 aa13.35□□□□□ -0.27
COL4A3BP-202ENST00000357457 MSH6P52701 1360 aa13.34□□□□□ -0.27
COL4A3BP-202ENST00000357457 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
COL4A3BP-202ENST00000357457 NCOA3Q9Y6Q9 1424 aa13.33□□□□□ -0.28
COL4A3BP-202ENST00000357457 BCANQ96GW7 911 aa13.33□□□□□ -0.28
COL4A3BP-202ENST00000357457 TMEM131LA2VDJ0 1609 aa13.32□□□□□ -0.28
COL4A3BP-202ENST00000357457 RIMS2Q9UQ26 1411 aa13.32□□□□□ -0.28
COL4A3BP-202ENST00000357457 FAM50AQ14320 339 aaKnown RBP13.31□□□□□ -0.28
COL4A3BP-202ENST00000357457 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.31□□□□□ -0.28
COL4A3BP-202ENST00000357457 JCADQ9P266 1359 aa13.31□□□□□ -0.28
COL4A3BP-202ENST00000357457 GCC2Q8IWJ2 1684 aa13.3□□□□□ -0.28
COL4A3BP-202ENST00000357457 PHLPP1O60346 1717 aa13.3□□□□□ -0.28
COL4A3BP-202ENST00000357457 PPP1R15AO75807 674 aaPredicted RBP13.29□□□□□ -0.28
COL4A3BP-202ENST00000357457 PIK3R4Q99570 1358 aa13.29□□□□□ -0.28
COL4A3BP-202ENST00000357457 C19orf44Q9H6X5 657 aa13.28□□□□□ -0.28
COL4A3BP-202ENST00000357457 ADAMTS13Q76LX8 1427 aa13.28□□□□□ -0.28
COL4A3BP-202ENST00000357457 UNC13BO14795 1591 aa13.28□□□□□ -0.28
COL4A3BP-202ENST00000357457 E9PCH4 1651 aa13.26□□□□□ -0.29
COL4A3BP-202ENST00000357457 COL16A1Q07092 1604 aaPredicted RBP13.26□□□□□ -0.29
COL4A3BP-202ENST00000357457 ROCK1Q13464 1354 aa13.26□□□□□ -0.29
COL4A3BP-202ENST00000357457 CADPS2Q86UW7 1296 aa13.26□□□□□ -0.29
COL4A3BP-202ENST00000357457 SPATA31A6Q5VVP1 1343 aa13.25□□□□□ -0.29
COL4A3BP-202ENST00000357457 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.25□□□□□ -0.29
COL4A3BP-202ENST00000357457 DIP2AQ14689 1571 aa13.24□□□□□ -0.29
COL4A3BP-202ENST00000357457 CHGAP10645 457 aaKnown RBP13.24□□□□□ -0.29
COL4A3BP-202ENST00000357457 IQGAP3Q86VI3 1631 aa13.24□□□□□ -0.29
COL4A3BP-202ENST00000357457 ATF3P18847 181 aa13.23□□□□□ -0.29
COL4A3BP-202ENST00000357457 NUTM2DQ5VT03 806 aaPredicted RBP13.23□□□□□ -0.29
COL4A3BP-202ENST00000357457 AHDC1Q5TGY3 1603 aaPredicted RBP13.22□□□□□ -0.29
COL4A3BP-202ENST00000357457 C14orf37Q86TY3 774 aa13.22□□□□□ -0.29
COL4A3BP-202ENST00000357457 AMOTL2Q9Y2J4 779 aa13.22□□□□□ -0.29
COL4A3BP-202ENST00000357457 PTPRUQ92729 1446 aa13.22□□□□□ -0.29
COL4A3BP-202ENST00000357457 ZNF772Q68DY9 489 aaPredicted RBP13.21□□□□□ -0.29
COL4A3BP-202ENST00000357457 LRP6O75581 1613 aa13.21□□□□□ -0.3
COL4A3BP-202ENST00000357457 NUP155O75694 1391 aa13.2□□□□□ -0.3
COL4A3BP-202ENST00000357457 BRINP3Q76B58 766 aa13.2□□□□□ -0.3
COL4A3BP-202ENST00000357457 TRPM2O94759 1503 aa13.19□□□□□ -0.3
COL4A3BP-202ENST00000357457 SHPRHQ149N8 1683 aa13.19□□□□□ -0.3
COL4A3BP-202ENST00000357457 SETD1AO15047 1707 aaKnown RBP13.19□□□□□ -0.3
COL4A3BP-202ENST00000357457 DCAF8L1A6NGE4 600 aa13.18□□□□□ -0.3
COL4A3BP-202ENST00000357457 CACNB1Q02641 598 aaPredicted RBP13.18□□□□□ -0.3
COL4A3BP-202ENST00000357457 DCCP43146 1447 aa13.18□□□□□ -0.3
COL4A3BP-202ENST00000357457 NRXN3Q9Y4C0 1643 aa13.17□□□□□ -0.3
COL4A3BP-202ENST00000357457 SETBP1Q9Y6X0 1596 aa13.16□□□□□ -0.3
COL4A3BP-202ENST00000357457 MEX3CQ5U5Q3 659 aaKnown RBP13.16□□□□□ -0.3
COL4A3BP-202ENST00000357457 UPF1Q92900 1129 aaKnown RBP eCLIP13.16□□□□□ -0.34e-7■■■■□ 23.5
COL4A3BP-202ENST00000357457 SETD5Q9C0A6 1442 aa13.15□□□□□ -0.3
COL4A3BP-202ENST00000357457 XRN1Q8IZH2 1706 aaKnown RBP13.15□□□□□ -0.3
COL4A3BP-202ENST00000357457 RXRBP28702 533 aa13.14□□□□□ -0.31
COL4A3BP-202ENST00000357457 METP08581 1390 aa13.14□□□□□ -0.31
COL4A3BP-202ENST00000357457 MST1RQ04912 1400 aa13.13□□□□□ -0.31
COL4A3BP-202ENST00000357457 LRRC59Q96AG4 307 aaKnown RBP13.13□□□□□ -0.31
COL4A3BP-202ENST00000357457 SPHKAPQ2M3C7 1700 aa13.13□□□□□ -0.31
COL4A3BP-202ENST00000357457 ASXL1Q8IXJ9 1541 aa13.13□□□□□ -0.31
COL4A3BP-202ENST00000357457 CDK12Q9NYV4 1490 aaPredicted RBP13.12□□□□□ -0.31
COL4A3BP-202ENST00000357457 ZNF326Q5BKZ1 582 aaKnown RBP13.12□□□□□ -0.31
COL4A3BP-202ENST00000357457 TRIM52Q96A61 297 aa13.12□□□□□ -0.31
COL4A3BP-202ENST00000357457 NHSL1Q5SYE7 1610 aa13.12□□□□□ -0.31
COL4A3BP-202ENST00000357457 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
COL4A3BP-202ENST00000357457 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
COL4A3BP-202ENST00000357457 ITGAEP38570 1179 aa13.11□□□□□ -0.31
COL4A3BP-202ENST00000357457 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
COL4A3BP-202ENST00000357457 AFF2P51816 1311 aa13.1□□□□□ -0.31
COL4A3BP-202ENST00000357457 ADGRL3Q9HAR2 1447 aa13.09□□□□□ -0.31
COL4A3BP-202ENST00000357457 SRCAPQ6ZRS2 3230 aa13.09□□□□□ -0.31
COL4A3BP-202ENST00000357457 NEXMIFQ5QGS0 1516 aa13.08□□□□□ -0.31
COL4A3BP-202ENST00000357457 DDX17Q92841 729 aaKnown RBP13.07□□□□□ -0.32
COL4A3BP-202ENST00000357457 QTRT2Q9H974 415 aaKnown RBP13.07□□□□□ -0.32
COL4A3BP-202ENST00000357457 PNPLA6Q8IY17 1366 aa13.07□□□□□ -0.32
COL4A3BP-202ENST00000357457 KIF1BO60333 1816 aa13.06□□□□□ -0.32
COL4A3BP-202ENST00000357457 CLTCL1P53675 1640 aa13.06□□□□□ -0.32
COL4A3BP-202ENST00000357457 RBM6P78332 1123 aaKnown RBP13.06□□□□□ -0.32
COL4A3BP-202ENST00000357457 LAMC1P11047 1609 aa13.06□□□□□ -0.32
COL4A3BP-202ENST00000357457 NALCNQ8IZF0 1738 aa13.05□□□□□ -0.32
COL4A3BP-202ENST00000357457 C1orf167Q5SNV9 1468 aa13.05□□□□□ -0.32
COL4A3BP-202ENST00000357457 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
COL4A3BP-202ENST00000357457 SOS2Q07890 1332 aaPredicted RBP13.05□□□□□ -0.32
COL4A3BP-202ENST00000357457 C8orf37Q96NL8 207 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms