RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 NUP155O75694 1391 aa15.67■□□□□ 0.1
LINC01560-201ENST00000357412 PLEKHG1Q9ULL1 1385 aa15.67■□□□□ 0.1
LINC01560-201ENST00000357412 PPP1R15AO75807 674 aaPredicted RBP15.67■□□□□ 0.1
LINC01560-201ENST00000357412 RIMS2Q9UQ26 1411 aa15.67■□□□□ 0.1
LINC01560-201ENST00000357412 STRCP1A6NGW2 1772 aa15.67■□□□□ 0.1
LINC01560-201ENST00000357412 CHGAP10645 457 aaKnown RBP15.66■□□□□ 0.1
LINC01560-201ENST00000357412 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.65■□□□□ 0.1
LINC01560-201ENST00000357412 TBX22Q9Y458 520 aa15.65■□□□□ 0.1
LINC01560-201ENST00000357412 MED1Q15648 1581 aaPredicted RBP15.65■□□□□ 0.1
LINC01560-201ENST00000357412 NUTM2DQ5VT03 806 aaPredicted RBP15.64■□□□□ 0.09
LINC01560-201ENST00000357412 KDM5AP29375 1690 aaKnown RBP15.61■□□□□ 0.09
LINC01560-201ENST00000357412 NKTRP30414 1462 aaKnown RBP15.61■□□□□ 0.09
LINC01560-201ENST00000357412 ADAMTS13Q76LX8 1427 aa15.6■□□□□ 0.09
LINC01560-201ENST00000357412 RGS17Q9UGC6 210 aaPredicted RBP15.6■□□□□ 0.09
LINC01560-201ENST00000357412 MSH6P52701 1360 aa15.6■□□□□ 0.09
LINC01560-201ENST00000357412 CFAP65Q6ZU64 1925 aaKnown RBP15.59■□□□□ 0.09
LINC01560-201ENST00000357412 SLAIN2Q9P270 581 aa15.59■□□□□ 0.09
LINC01560-201ENST00000357412 UNC13BO14795 1591 aa15.58■□□□□ 0.09
LINC01560-201ENST00000357412 NWD1Q149M9 1564 aa15.56■□□□□ 0.08
LINC01560-201ENST00000357412 TMEM131LA2VDJ0 1609 aa15.55■□□□□ 0.08
LINC01560-201ENST00000357412 NCOA3Q9Y6Q9 1424 aa15.55■□□□□ 0.08
LINC01560-201ENST00000357412 PIK3R4Q99570 1358 aa15.55■□□□□ 0.08
LINC01560-201ENST00000357412 RRBP1Q9P2E9 1410 aaKnown RBP15.54■□□□□ 0.08
LINC01560-201ENST00000357412 AMOTL2Q9Y2J4 779 aa15.54■□□□□ 0.08
LINC01560-201ENST00000357412 C19orf44Q9H6X5 657 aa15.53■□□□□ 0.08
LINC01560-201ENST00000357412 C14orf37Q86TY3 774 aa15.52■□□□□ 0.08
LINC01560-201ENST00000357412 IQGAP3Q86VI3 1631 aa15.52■□□□□ 0.08
LINC01560-201ENST00000357412 PTPRUQ92729 1446 aa15.51■□□□□ 0.07
LINC01560-201ENST00000357412 ZNF326Q5BKZ1 582 aaKnown RBP15.51■□□□□ 0.07
LINC01560-201ENST00000357412 CADPS2Q86UW7 1296 aa15.51■□□□□ 0.07
LINC01560-201ENST00000357412 NAIPQ13075 1403 aa15.51■□□□□ 0.07
LINC01560-201ENST00000357412 E9PCH4 1651 aa15.49■□□□□ 0.07
LINC01560-201ENST00000357412 ATF3P18847 181 aa15.49■□□□□ 0.07
LINC01560-201ENST00000357412 POTEAQ6S8J7 498 aa15.48■□□□□ 0.07
LINC01560-201ENST00000357412 METP08581 1390 aa15.48■□□□□ 0.07
LINC01560-201ENST00000357412 JCADQ9P266 1359 aa15.48■□□□□ 0.07
LINC01560-201ENST00000357412 XIRP1Q702N8 1843 aaKnown RBP15.47■□□□□ 0.07
LINC01560-201ENST00000357412 GCC2Q8IWJ2 1684 aa15.47■□□□□ 0.07
LINC01560-201ENST00000357412 BRINP3Q76B58 766 aa15.45■□□□□ 0.06
LINC01560-201ENST00000357412 TRIM52Q96A61 297 aa15.45■□□□□ 0.06
LINC01560-201ENST00000357412 DIP2AQ14689 1571 aa15.45■□□□□ 0.06
LINC01560-201ENST00000357412 HFM1A2PYH4 1435 aa15.44■□□□□ 0.06
LINC01560-201ENST00000357412 ROBO1Q9Y6N7 1651 aa15.44■□□□□ 0.06
LINC01560-201ENST00000357412 TRPM2O94759 1503 aa15.43■□□□□ 0.06
LINC01560-201ENST00000357412 SLC4A1APQ9BWU0 796 aaKnown RBP15.42■□□□□ 0.06
LINC01560-201ENST00000357412 DCCP43146 1447 aa15.41■□□□□ 0.06
LINC01560-201ENST00000357412 SPATA31A6Q5VVP1 1343 aa15.41■□□□□ 0.06
LINC01560-201ENST00000357412 SETBP1Q9Y6X0 1596 aa15.41■□□□□ 0.06
LINC01560-201ENST00000357412 VGFO15240 615 aaPredicted RBP15.39■□□□□ 0.05
LINC01560-201ENST00000357412 RPGRIP1LQ68CZ1 1315 aa15.39■□□□□ 0.05
LINC01560-201ENST00000357412 CHD2O14647 1828 aaKnown RBP15.38■□□□□ 0.05
LINC01560-201ENST00000357412 MST1RQ04912 1400 aa15.37■□□□□ 0.05
LINC01560-201ENST00000357412 FOXD1Q16676 465 aa15.37■□□□□ 0.05
LINC01560-201ENST00000357412 NEXMIFQ5QGS0 1516 aa15.37■□□□□ 0.05
LINC01560-201ENST00000357412 NRXN3Q9Y4C0 1643 aa15.36■□□□□ 0.05
LINC01560-201ENST00000357412 LRP6O75581 1613 aa15.35■□□□□ 0.05
LINC01560-201ENST00000357412 MYO5BQ9ULV0 1848 aa15.35■□□□□ 0.05
LINC01560-201ENST00000357412 ROBO2Q9HCK4 1378 aa15.35■□□□□ 0.05
LINC01560-201ENST00000357412 ADGRL3Q9HAR2 1447 aa15.34■□□□□ 0.05
LINC01560-201ENST00000357412 MEX3CQ5U5Q3 659 aaKnown RBP15.34■□□□□ 0.05
LINC01560-201ENST00000357412 DDX17Q92841 729 aaKnown RBP15.34■□□□□ 0.05
LINC01560-201ENST00000357412 CLTCL1P53675 1640 aa15.34■□□□□ 0.05
LINC01560-201ENST00000357412 COL16A1Q07092 1604 aaPredicted RBP15.34■□□□□ 0.05
LINC01560-201ENST00000357412 AHDC1Q5TGY3 1603 aaPredicted RBP15.34■□□□□ 0.05
LINC01560-201ENST00000357412 ZNF772Q68DY9 489 aaPredicted RBP15.33■□□□□ 0.04
LINC01560-201ENST00000357412 SETD5Q9C0A6 1442 aa15.33■□□□□ 0.04
LINC01560-201ENST00000357412 LRRC59Q96AG4 307 aaKnown RBP15.32■□□□□ 0.04
LINC01560-201ENST00000357412 MPHOSPH9Q99550 1183 aa15.32■□□□□ 0.04
LINC01560-201ENST00000357412 PTCH1Q13635 1447 aa15.32■□□□□ 0.04
LINC01560-201ENST00000357412 ASXL1Q8IXJ9 1541 aa15.32■□□□□ 0.04
LINC01560-201ENST00000357412 XRN1Q8IZH2 1706 aaKnown RBP15.31■□□□□ 0.04
LINC01560-201ENST00000357412 NUTM2BA6NNL0 878 aaPredicted RBP15.31■□□□□ 0.04
LINC01560-201ENST00000357412 NUTM2EB1AL46 878 aaPredicted RBP15.31■□□□□ 0.04
LINC01560-201ENST00000357412 NUTM2AQ8IVF1 878 aaPredicted RBP15.31■□□□□ 0.04
LINC01560-201ENST00000357412 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.31■□□□□ 0.04
LINC01560-201ENST00000357412 SPHKAPQ2M3C7 1700 aa15.3■□□□□ 0.04
LINC01560-201ENST00000357412 PRAG1Q86YV5 1406 aa15.3■□□□□ 0.04
LINC01560-201ENST00000357412 ADGRF5Q8IZF2 1346 aa15.3■□□□□ 0.04
LINC01560-201ENST00000357412 PHLPP1O60346 1717 aa15.29■□□□□ 0.04
LINC01560-201ENST00000357412 C1orf167Q5SNV9 1468 aa15.29■□□□□ 0.04
LINC01560-201ENST00000357412 ORAI2Q96SN7 254 aa15.29■□□□□ 0.04
LINC01560-201ENST00000357412 RGL3Q3MIN7 710 aa15.28■□□□□ 0.04
LINC01560-201ENST00000357412 CCDC144AA2RUR9 1427 aa15.27■□□□□ 0.04
LINC01560-201ENST00000357412 SPATA31E1Q6ZUB1 1445 aa15.26■□□□□ 0.03
LINC01560-201ENST00000357412 PNPLA6Q8IY17 1366 aa15.26■□□□□ 0.03
LINC01560-201ENST00000357412 SOS2Q07890 1332 aaPredicted RBP15.26■□□□□ 0.03
LINC01560-201ENST00000357412 RXRBP28702 533 aa15.25■□□□□ 0.03
LINC01560-201ENST00000357412 AFF2P51816 1311 aa15.24■□□□□ 0.03
LINC01560-201ENST00000357412 ANKRD30BQ9BXX2 1392 aa15.24■□□□□ 0.03
LINC01560-201ENST00000357412 WAPLQ7Z5K2 1190 aa15.23■□□□□ 0.03
LINC01560-201ENST00000357412 C8orf37Q96NL8 207 aa15.23■□□□□ 0.03
LINC01560-201ENST00000357412 STK26Q9P289 416 aa15.23■□□□□ 0.03
LINC01560-201ENST00000357412 TMEM132EQ6IEE7 984 aa15.22■□□□□ 0.03
LINC01560-201ENST00000357412 LRPPRCP42704 1394 aaKnown RBP15.22■□□□□ 0.03
LINC01560-201ENST00000357412 ESCO1Q5FWF5 840 aa15.21■□□□□ 0.03
LINC01560-201ENST00000357412 ABCC11Q96J66 1382 aa15.21■□□□□ 0.02
LINC01560-201ENST00000357412 TECPR2O15040 1411 aa15.2■□□□□ 0.02
LINC01560-201ENST00000357412 ADAMTS2O95450 1211 aa15.2■□□□□ 0.02
LINC01560-201ENST00000357412 UPF1Q92900 1129 aaKnown RBP eCLIP15.2■□□□□ 0.02
LINC01560-201ENST00000357412 ACIN1Q9UKV3 1341 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms