RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 TRAK1Q9UPV9 953 aa15.76■□□□□ 0.11
BDNF-202ENST00000356660 DDX11L8A8MPP1 907 aa15.75■□□□□ 0.11
BDNF-202ENST00000356660 MRE11P49959 708 aa15.75■□□□□ 0.11
BDNF-202ENST00000356660 PDIA4P13667 645 aaKnown RBP15.74■□□□□ 0.11
BDNF-202ENST00000356660 KDM5BQ9UGL1 1544 aa15.74■□□□□ 0.11
BDNF-202ENST00000356660 KANK1Q14678 1352 aa15.73■□□□□ 0.11
BDNF-202ENST00000356660 XRCC6P12956 609 aaKnown RBP eCLIP15.73■□□□□ 0.11
BDNF-202ENST00000356660 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
BDNF-202ENST00000356660 SPAG9O60271 1321 aaKnown RBP15.73■□□□□ 0.11
BDNF-202ENST00000356660 PER1O15534 1290 aaPredicted RBP15.73■□□□□ 0.11
BDNF-202ENST00000356660 DISP3Q9P2K9 1392 aa15.72■□□□□ 0.11
BDNF-202ENST00000356660 KDM2BQ8NHM5 1336 aa15.72■□□□□ 0.11
BDNF-202ENST00000356660 THOC2Q8NI27 1593 aaKnown RBP15.72■□□□□ 0.11
BDNF-202ENST00000356660 PDE3AQ14432 1141 aa15.72■□□□□ 0.11
BDNF-202ENST00000356660 PARD3Q8TEW0 1356 aa15.72■□□□□ 0.11
BDNF-202ENST00000356660 DDX49Q9Y6V7 483 aaKnown RBP15.72■□□□□ 0.11
BDNF-202ENST00000356660 HECW1Q76N89 1606 aa15.72■□□□□ 0.11
BDNF-202ENST00000356660 APBB1O00213 710 aa15.72■□□□□ 0.11
BDNF-202ENST00000356660 PLEKHH1Q9ULM0 1364 aa15.71■□□□□ 0.11
BDNF-202ENST00000356660 SPINK5Q9NQ38 1064 aaPredicted RBP15.71■□□□□ 0.11
BDNF-202ENST00000356660 LNPKQ9C0E8 428 aa15.71■□□□□ 0.11
BDNF-202ENST00000356660 NUTM2FA1L443 756 aa15.71■□□□□ 0.1
BDNF-202ENST00000356660 ZKSCAN2Q63HK3 967 aa15.71■□□□□ 0.1
BDNF-202ENST00000356660 GRPEL1Q9HAV7 217 aa15.7■□□□□ 0.1
BDNF-202ENST00000356660 ERBINQ96RT1 1412 aa15.7■□□□□ 0.1
BDNF-202ENST00000356660 ESPNB1AK53 854 aa15.7■□□□□ 0.1
BDNF-202ENST00000356660 DENND4BO75064 1496 aaPredicted RBP15.7■□□□□ 0.1
BDNF-202ENST00000356660 DNMBPQ6XZF7 1577 aa15.7■□□□□ 0.1
BDNF-202ENST00000356660 TCP11L2Q8N4U5 519 aa15.7■□□□□ 0.1
BDNF-202ENST00000356660 FAM13BQ9NYF5 915 aa15.69■□□□□ 0.1
BDNF-202ENST00000356660 EIF3AQ14152 1382 aaKnown RBP15.69■□□□□ 0.1
BDNF-202ENST00000356660 CDK11BP21127 795 aaKnown RBP15.69■□□□□ 0.1
BDNF-202ENST00000356660 FOXD4L5Q5VV16 416 aaPredicted RBP15.69■□□□□ 0.1
BDNF-202ENST00000356660 FOXD4L4Q8WXT5 416 aaPredicted RBP15.69■□□□□ 0.1
BDNF-202ENST00000356660 DZIP1LQ8IYY4 767 aaKnown RBP15.68■□□□□ 0.1
BDNF-202ENST00000356660 PLCB2Q00722 1185 aa15.68■□□□□ 0.1
BDNF-202ENST00000356660 C9orf84Q5VXU9 1444 aa15.68■□□□□ 0.1
BDNF-202ENST00000356660 TCOF1Q13428 1488 aaKnown RBP15.68■□□□□ 0.1
BDNF-202ENST00000356660 MAGI3Q5TCQ9 1506 aa15.68■□□□□ 0.1
BDNF-202ENST00000356660 RBM10P98175 930 aaKnown RBP15.67■□□□□ 0.1
BDNF-202ENST00000356660 ANKRD45Q5TZF3 282 aa15.66■□□□□ 0.1
BDNF-202ENST00000356660 TNNQ9UQP3 1299 aa15.66■□□□□ 0.1
BDNF-202ENST00000356660 RRP9O43818 475 aaKnown RBP15.66■□□□□ 0.1
BDNF-202ENST00000356660 CALD1Q05682 793 aaKnown RBP15.66■□□□□ 0.1
BDNF-202ENST00000356660 CUL7Q14999 1698 aa15.65■□□□□ 0.1
BDNF-202ENST00000356660 WWC1Q8IX03 1113 aa15.65■□□□□ 0.1
BDNF-202ENST00000356660 CAMSAP2Q08AD1 1489 aa15.65■□□□□ 0.1
BDNF-202ENST00000356660 PZPP20742 1482 aa15.65■□□□□ 0.1
BDNF-202ENST00000356660 ELL2O00472 640 aaPredicted RBP15.65■□□□□ 0.1
BDNF-202ENST00000356660 TROQ12816 1431 aaPredicted RBP15.65■□□□□ 0.1
BDNF-202ENST00000356660 RALGAPBQ86X10 1494 aa15.65■□□□□ 0.1
BDNF-202ENST00000356660 TSR2Q969E8 191 aaKnown RBP15.65■□□□□ 0.1
BDNF-202ENST00000356660 PCDHB15Q9Y5E8 787 aa15.65■□□□□ 0.1
BDNF-202ENST00000356660 PTPRGP23470 1445 aa15.65■□□□□ 0.1
BDNF-202ENST00000356660 RUNDC1Q96C34 613 aa15.64■□□□□ 0.09
BDNF-202ENST00000356660 TBC1D32Q96NH3 1257 aa15.63■□□□□ 0.09
BDNF-202ENST00000356660 TESK2Q96S53 571 aa15.63■□□□□ 0.09
BDNF-202ENST00000356660 IPO8O15397 1037 aaKnown RBP15.62■□□□□ 0.09
BDNF-202ENST00000356660 NASPP49321 788 aaPredicted RBP15.62■□□□□ 0.09
BDNF-202ENST00000356660 R3HCC1Q9Y3T6 440 aaKnown RBP15.62■□□□□ 0.09
BDNF-202ENST00000356660 DMRT2Q9Y5R5 561 aa15.62■□□□□ 0.09
BDNF-202ENST00000356660 CC2D2AQ9P2K1 1620 aa15.62■□□□□ 0.09
BDNF-202ENST00000356660 CFAP70Q5T0N1 1121 aa15.61■□□□□ 0.09
BDNF-202ENST00000356660 RSPH4AQ5TD94 716 aa15.61■□□□□ 0.09
BDNF-202ENST00000356660 MTHFSP49914 203 aa15.61■□□□□ 0.09
BDNF-202ENST00000356660 FOXD4L6Q3SYB3 417 aaPredicted RBP15.61■□□□□ 0.09
BDNF-202ENST00000356660 FOXD4L3Q6VB84 417 aaPredicted RBP15.61■□□□□ 0.09
BDNF-202ENST00000356660 NKTRP30414 1462 aaKnown RBP15.61■□□□□ 0.09
BDNF-202ENST00000356660 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.61■□□□□ 0.09
BDNF-202ENST00000356660 RARSP54136 660 aaKnown RBP15.6■□□□□ 0.09
BDNF-202ENST00000356660 KIAA1211Q6ZU35 1233 aa15.6■□□□□ 0.09
BDNF-202ENST00000356660 TRHP20396 242 aaPredicted RBP15.6■□□□□ 0.09
BDNF-202ENST00000356660 SKOR2Q2VWA4 1001 aaPredicted RBP15.6■□□□□ 0.09
BDNF-202ENST00000356660 BCL11BQ9C0K0 894 aaPredicted RBP15.6■□□□□ 0.09
BDNF-202ENST00000356660 CTTNBP2Q8WZ74 1663 aa15.59■□□□□ 0.09
BDNF-202ENST00000356660 CLCN1P35523 988 aa15.59■□□□□ 0.09
BDNF-202ENST00000356660 NOL8Q76FK4 1167 aaKnown RBP15.59■□□□□ 0.09
BDNF-202ENST00000356660 TAOK2Q9UL54 1235 aa15.59■□□□□ 0.09
BDNF-202ENST00000356660 DDX19BQ9UMR2 479 aa15.59■□□□□ 0.09
BDNF-202ENST00000356660 MCTP1Q6DN14 999 aa15.59■□□□□ 0.09
BDNF-202ENST00000356660 PLEKHH2Q8IVE3 1493 aa15.58■□□□□ 0.08
BDNF-202ENST00000356660 RLBP1P12271 317 aa15.58■□□□□ 0.08
BDNF-202ENST00000356660 EXOSC9Q06265 439 aaKnown RBP15.58■□□□□ 0.08
BDNF-202ENST00000356660 AFAP1Q8N556 730 aa15.58■□□□□ 0.08
BDNF-202ENST00000356660 SLC12A5Q9H2X9 1139 aa15.57■□□□□ 0.08
BDNF-202ENST00000356660 HDGFL2Q7Z4V5 671 aaPredicted RBP15.57■□□□□ 0.08
BDNF-202ENST00000356660 HAP1P54257 671 aaPredicted RBP15.57■□□□□ 0.08
BDNF-202ENST00000356660 MVPQ14764 893 aaKnown RBP15.57■□□□□ 0.08
BDNF-202ENST00000356660 NGEFQ8N5V2 710 aa15.57■□□□□ 0.08
BDNF-202ENST00000356660 IQGAP2Q13576 1575 aa15.57■□□□□ 0.08
BDNF-202ENST00000356660 BCORL1Q5H9F3 1711 aa15.57■□□□□ 0.08
BDNF-202ENST00000356660 PTMSP20962 102 aa15.56■□□□□ 0.08
BDNF-202ENST00000356660 CAVIN1Q6NZI2 390 aaKnown RBP15.56■□□□□ 0.08
BDNF-202ENST00000356660 CASC1Q6TDU7 716 aa15.56■□□□□ 0.08
BDNF-202ENST00000356660 C1orf115Q9H7X2 142 aa15.56■□□□□ 0.08
BDNF-202ENST00000356660 PLB1Q6P1J6 1458 aa15.56■□□□□ 0.08
BDNF-202ENST00000356660 GCC2Q8IWJ2 1684 aa15.55■□□□□ 0.08
BDNF-202ENST00000356660 TNPO1Q92973 898 aaKnown RBP15.55■□□□□ 0.08
BDNF-202ENST00000356660 URB2Q14146 1524 aaKnown RBP15.54■□□□□ 0.08
BDNF-202ENST00000356660 CYB5RLQ6IPT4 315 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms