RNA–Protein interactions for RNA: ENST00000356175.7

NF1-201, Transcript of neurofibromin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NF1, Length 12,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-201ENST00000356175 FAM177A1Q8N128 213 aaPredicted RBP8.3□□□□□ -1.08
NF1-201ENST00000356175 SECISBP2LQ93073 1101 aaKnown RBP8.3□□□□□ -1.08
NF1-201ENST00000356175 CCDC94Q9BW85 323 aaPredicted RBP8.3□□□□□ -1.08
NF1-201ENST00000356175 GOLGA6L19H0YKK7 550 aa8.3□□□□□ -1.08
NF1-201ENST00000356175 MCCP23508 829 aa8.3□□□□□ -1.08
NF1-201ENST00000356175 TSPY26PQ9H489 355 aa8.3□□□□□ -1.08
NF1-201ENST00000356175 RUFY1Q96T51 708 aa8.29□□□□□ -1.08
NF1-201ENST00000356175 LETM1O95202 739 aaPredicted RBP8.29□□□□□ -1.08
NF1-201ENST00000356175 SARNPP82979 210 aaKnown RBP8.29□□□□□ -1.08
NF1-201ENST00000356175 HMGN5P82970 282 aaKnown RBP8.29□□□□□ -1.08
NF1-201ENST00000356175 ABCC8Q09428 1581 aa8.29□□□□□ -1.08
NF1-201ENST00000356175 MYH11P35749 1972 aa8.29□□□□□ -1.08
NF1-201ENST00000356175 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.28□□□□□ -1.081e-7■■■■□ 20.8
NF1-201ENST00000356175 HSPA5P11021 654 aaKnown RBP8.28□□□□□ -1.08
NF1-201ENST00000356175 NOL10Q9BSC4 688 aaKnown RBP8.28□□□□□ -1.08
NF1-201ENST00000356175 PDILTQ8N807 584 aa8.28□□□□□ -1.08
NF1-201ENST00000356175 CDR1P51861 262 aa8.28□□□□□ -1.08
NF1-201ENST00000356175 CCDC112Q8NEF3 446 aa8.28□□□□□ -1.08
NF1-201ENST00000356175 TTC31Q49AM3 519 aaPredicted RBP8.27□□□□□ -1.08
NF1-201ENST00000356175 RNF187Q5TA31 235 aaPredicted RBP8.27□□□□□ -1.08
NF1-201ENST00000356175 ZSCAN30Q86W11 494 aa8.27□□□□□ -1.08
NF1-201ENST00000356175 TPM4P67936 248 aa8.27□□□□□ -1.09
NF1-201ENST00000356175 CAGE1Q8TC20 777 aa8.27□□□□□ -1.09
NF1-201ENST00000356175 NACADO15069 1562 aa8.27□□□□□ -1.09
NF1-201ENST00000356175 CHMP5Q9NZZ3 219 aa8.27□□□□□ -1.09
NF1-201ENST00000356175 ZNF830Q96NB3 372 aaPredicted RBP8.27□□□□□ -1.09
NF1-201ENST00000356175 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.27□□□□□ -1.09
NF1-201ENST00000356175 V9GYY5 206 aaPredicted RBP8.27□□□□□ -1.09
NF1-201ENST00000356175 SMAP1Q8IYB5 467 aaPredicted RBP8.27□□□□□ -1.09
NF1-201ENST00000356175 TRIM5Q9C035 493 aa8.26□□□□□ -1.09
NF1-201ENST00000356175 BECN2A8MW95 431 aa8.26□□□□□ -1.09
NF1-201ENST00000356175 CCDC27Q2M243 656 aa8.26□□□□□ -1.09
NF1-201ENST00000356175 CCDC34Q96HJ3 373 aa8.26□□□□□ -1.09
NF1-201ENST00000356175 FRMD3A2A2Y4 597 aa8.26□□□□□ -1.09
NF1-201ENST00000356175 DHX57Q6P158 1386 aaKnown RBP8.26□□□□□ -1.09
NF1-201ENST00000356175 LMAN1P49257 510 aa8.26□□□□□ -1.09
NF1-201ENST00000356175 LRCH2Q5VUJ6 765 aa8.26□□□□□ -1.09
NF1-201ENST00000356175 CCDC102AQ96A19 550 aa8.26□□□□□ -1.09
NF1-201ENST00000356175 MYH6P13533 1939 aa8.26□□□□□ -1.09
NF1-201ENST00000356175 ZBTB22O15209 634 aa8.25□□□□□ -1.09
NF1-201ENST00000356175 MS4A1P11836 297 aa8.25□□□□□ -1.09
NF1-201ENST00000356175 NBPF1Q3BBV0 1214 aa8.25□□□□□ -1.09
NF1-201ENST00000356175 DYNC1I1O14576 645 aa8.25□□□□□ -1.09
NF1-201ENST00000356175 NUMA1Q14980 2115 aa8.25□□□□□ -1.09
NF1-201ENST00000356175 NEBLO76041 1014 aa8.25□□□□□ -1.09
NF1-201ENST00000356175 CT47B1P0C2W7 299 aaPredicted RBP8.25□□□□□ -1.09
NF1-201ENST00000356175 C16orf45Q96MC5 204 aaPredicted RBP8.25□□□□□ -1.09
NF1-201ENST00000356175 PRPF40AO75400 957 aaKnown RBP8.25□□□□□ -1.09
NF1-201ENST00000356175 ENOX2Q16206 610 aaKnown RBP8.25□□□□□ -1.09
NF1-201ENST00000356175 BCL2L13Q9BXK5 485 aa8.25□□□□□ -1.09
NF1-201ENST00000356175 GTPBP4Q9BZE4 634 aaKnown RBP8.25□□□□□ -1.09
NF1-201ENST00000356175 SMC2O95347 1197 aa8.25□□□□□ -1.09
NF1-201ENST00000356175 NAP1L1P55209 391 aaKnown RBP8.25□□□□□ -1.09
NF1-201ENST00000356175 CENPQQ7L2Z9 268 aaPredicted RBP8.25□□□□□ -1.09
NF1-201ENST00000356175 TSC1Q92574 1164 aa8.25□□□□□ -1.09
NF1-201ENST00000356175 CHGAP10645 457 aaKnown RBP8.24□□□□□ -1.09
NF1-201ENST00000356175 SYCE3A1L190 88 aa8.24□□□□□ -1.09
NF1-201ENST00000356175 FYB1O15117 783 aa8.24□□□□□ -1.09
NF1-201ENST00000356175 RWDD1Q9H446 243 aaPredicted RBP8.24□□□□□ -1.09
NF1-201ENST00000356175 DCAF11Q8TEB1 546 aa8.24□□□□□ -1.09
NF1-201ENST00000356175 FOXD1Q16676 465 aa8.24□□□□□ -1.09
NF1-201ENST00000356175 KNSTRNQ9Y448 316 aa8.24□□□□□ -1.09
NF1-201ENST00000356175 C22orf23Q9BZE7 217 aa8.24□□□□□ -1.09
NF1-201ENST00000356175 ST18O60284 1047 aa8.23□□□□□ -1.09
NF1-201ENST00000356175 GBP2P32456 591 aaPredicted RBP8.23□□□□□ -1.09
NF1-201ENST00000356175 DNAAF4Q8WXU2 420 aa8.23□□□□□ -1.09
NF1-201ENST00000356175 FAM107BQ9H098 131 aa8.23□□□□□ -1.09
NF1-201ENST00000356175 ATP2C2O75185 946 aa8.23□□□□□ -1.09
NF1-201ENST00000356175 GTF3C6Q969F1 213 aa8.23□□□□□ -1.09
NF1-201ENST00000356175 ACBD3Q9H3P7 528 aa8.23□□□□□ -1.09
NF1-201ENST00000356175 PDE6BP35913 854 aa8.23□□□□□ -1.09
NF1-201ENST00000356175 DHX8Q14562 1220 aaKnown RBP8.23□□□□□ -1.09
NF1-201ENST00000356175 PRPF38AQ8NAV1 312 aaKnown RBP8.23□□□□□ -1.09
NF1-201ENST00000356175 RSPH14Q9UHP6 348 aa8.23□□□□□ -1.09
NF1-201ENST00000356175 WDR97A6NE52 1622 aa8.23□□□□□ -1.09
NF1-201ENST00000356175 CCDC70Q6NSX1 233 aa8.23□□□□□ -1.09
NF1-201ENST00000356175 CCAR1Q8IX12 1150 aaKnown RBP8.23□□□□□ -1.09
NF1-201ENST00000356175 ZBED9Q6R2W3 1325 aa8.23□□□□□ -1.09
NF1-201ENST00000356175 NAA25Q14CX7 972 aa8.22□□□□□ -1.09
NF1-201ENST00000356175 MRVI1Q9Y6F6 885 aa8.22□□□□□ -1.09
NF1-201ENST00000356175 KIF4AO95239 1232 aa8.22□□□□□ -1.09
NF1-201ENST00000356175 ANKRD20A12PQ8NF67 263 aa8.22□□□□□ -1.09
NF1-201ENST00000356175 USP8P40818 1118 aa8.21□□□□□ -1.09
NF1-201ENST00000356175 LOC102724159A0A0B4J2E5 919 aa8.21□□□□□ -1.09
NF1-201ENST00000356175 PWP2Q15269 919 aaKnown RBP8.21□□□□□ -1.09
NF1-201ENST00000356175 RGL3Q3MIN7 710 aa8.21□□□□□ -1.09
NF1-201ENST00000356175 CPSF2Q9P2I0 782 aaKnown RBP8.21□□□□□ -1.09
NF1-201ENST00000356175 C17orf53Q8N3J3 647 aaPredicted RBP8.21□□□□□ -1.1
NF1-201ENST00000356175 MCM4P33991 863 aa8.21□□□□□ -1.1
NF1-201ENST00000356175 GOLGA3Q08378 1498 aa8.21□□□□□ -1.1
NF1-201ENST00000356175 PRM3Q9NNZ6 103 aa8.21□□□□□ -1.1
NF1-201ENST00000356175 CCDC91Q7Z6B0 441 aa8.21□□□□□ -1.1
NF1-201ENST00000356175 SCLT1Q96NL6 688 aa8.21□□□□□ -1.1
NF1-201ENST00000356175 RBM27Q9P2N5 1060 aaKnown RBP8.21□□□□□ -1.1
NF1-201ENST00000356175 RRP7AQ9Y3A4 280 aaKnown RBP8.21□□□□□ -1.1
NF1-201ENST00000356175 NF2P35240 595 aa8.21□□□□□ -1.1
NF1-201ENST00000356175 CEP57Q86XR8 500 aa8.21□□□□□ -1.1
NF1-201ENST00000356175 SSR1P43307 286 aaKnown RBP8.21□□□□□ -1.1
NF1-201ENST00000356175 VPS37CA5D8V6 355 aaPredicted RBP8.2□□□□□ -1.1
NF1-201ENST00000356175 BACH2Q9BYV9 841 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 346 ms