RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 MIER1Q8N108 512 aa11.29□□□□□ -0.6
COMMD9-202ENST00000355500 RSPH6AQ9H0K4 717 aa11.29□□□□□ -0.6
COMMD9-202ENST00000355500 SYCP2Q9BX26 1530 aa11.28□□□□□ -0.6
COMMD9-202ENST00000355500 A2MP01023 1474 aa11.28□□□□□ -0.6
COMMD9-202ENST00000355500 LAMC1P11047 1609 aa11.27□□□□□ -0.6
COMMD9-202ENST00000355500 ZNF644Q9H582 1327 aaPredicted RBP11.27□□□□□ -0.6
COMMD9-202ENST00000355500 ARID4BQ4LE39 1312 aaPredicted RBP11.26□□□□□ -0.61
COMMD9-202ENST00000355500 NEURL4Q96JN8 1562 aa11.26□□□□□ -0.61
COMMD9-202ENST00000355500 CLTCQ00610 1675 aaKnown RBP11.26□□□□□ -0.61
COMMD9-202ENST00000355500 CEP170BQ9Y4F5 1589 aaPredicted RBP11.25□□□□□ -0.61
COMMD9-202ENST00000355500 KIF15Q9NS87 1388 aa11.25□□□□□ -0.61
COMMD9-202ENST00000355500 NEUROD1Q13562 356 aa11.25□□□□□ -0.61
COMMD9-202ENST00000355500 CHIC2Q9UKJ5 165 aa11.25□□□□□ -0.61
COMMD9-202ENST00000355500 BCCIPQ9P287 314 aaKnown RBP eCLIP11.24□□□□□ -0.61
COMMD9-202ENST00000355500 A2ML1A8K2U0 1454 aa11.24□□□□□ -0.61
COMMD9-202ENST00000355500 CCER2I3L3R5 266 aa11.23□□□□□ -0.61
COMMD9-202ENST00000355500 NAP1L5Q96NT1 182 aaPredicted RBP11.23□□□□□ -0.61
COMMD9-202ENST00000355500 CPS1P31327 1500 aa11.23□□□□□ -0.61
COMMD9-202ENST00000355500 TSPY4P0CV99 314 aa11.22□□□□□ -0.61
COMMD9-202ENST00000355500 TSPY10P0CW01 314 aa11.22□□□□□ -0.61
COMMD9-202ENST00000355500 RBM10P98175 930 aaKnown RBP11.22□□□□□ -0.61
COMMD9-202ENST00000355500 TRIM52Q96A61 297 aa11.22□□□□□ -0.61
COMMD9-202ENST00000355500 SPATA31E1Q6ZUB1 1445 aa11.22□□□□□ -0.61
COMMD9-202ENST00000355500 RALGAPBQ86X10 1494 aa11.22□□□□□ -0.61
COMMD9-202ENST00000355500 CERKQ8TCT0 537 aa11.22□□□□□ -0.61
COMMD9-202ENST00000355500 NLRP1Q9C000 1473 aa11.22□□□□□ -0.61
COMMD9-202ENST00000355500 MED14O60244 1454 aa11.22□□□□□ -0.61
COMMD9-202ENST00000355500 PKD2Q13563 968 aa11.22□□□□□ -0.61
COMMD9-202ENST00000355500 SYNMO15061 1565 aa11.21□□□□□ -0.62
COMMD9-202ENST00000355500 DHX29Q7Z478 1369 aaKnown RBP11.21□□□□□ -0.62
COMMD9-202ENST00000355500 CAMSAP1Q5T5Y3 1602 aa11.2□□□□□ -0.62
COMMD9-202ENST00000355500 VWDEQ8N2E2 1590 aa11.2□□□□□ -0.62
COMMD9-202ENST00000355500 SPATA31D1Q6ZQQ2 1576 aa11.19□□□□□ -0.62
COMMD9-202ENST00000355500 ZNF326Q5BKZ1 582 aaKnown RBP11.19□□□□□ -0.62
COMMD9-202ENST00000355500 SPAG9O60271 1321 aaKnown RBP11.18□□□□□ -0.62
COMMD9-202ENST00000355500 CCDC9Q9Y3X0 531 aaKnown RBP11.18□□□□□ -0.62
COMMD9-202ENST00000355500 ZMYM3Q14202 1370 aa11.18□□□□□ -0.62
COMMD9-202ENST00000355500 BRPF3Q9ULD4 1205 aa11.17□□□□□ -0.62
COMMD9-202ENST00000355500 TET3O43151 1660 aa11.17□□□□□ -0.62
COMMD9-202ENST00000355500 HMGB1P09429 215 aaKnown RBP11.17□□□□□ -0.62
COMMD9-202ENST00000355500 AFAP1Q8N556 730 aa11.17□□□□□ -0.62
COMMD9-202ENST00000355500 ARHGAP31Q2M1Z3 1444 aa11.17□□□□□ -0.62
COMMD9-202ENST00000355500 PPP4R3CPQ6ZMV5 832 aa11.16□□□□□ -0.62
COMMD9-202ENST00000355500 TRPM1Q7Z4N2 1603 aa11.16□□□□□ -0.62
COMMD9-202ENST00000355500 EIF4G2P78344 907 aaKnown RBP eCLIP11.16□□□□□ -0.62
COMMD9-202ENST00000355500 L3MBTL2Q969R5 705 aa11.16□□□□□ -0.62
COMMD9-202ENST00000355500 NUP155O75694 1391 aa11.15□□□□□ -0.62
COMMD9-202ENST00000355500 PRDM15P57071 1507 aaPredicted RBP11.15□□□□□ -0.62
COMMD9-202ENST00000355500 LMTK2Q8IWU2 1503 aa11.15□□□□□ -0.62
COMMD9-202ENST00000355500 PUS7Q96PZ0 661 aaKnown RBP11.15□□□□□ -0.62
COMMD9-202ENST00000355500 CEP152O94986 1710 aa11.15□□□□□ -0.62
COMMD9-202ENST00000355500 TRPM2O94759 1503 aa11.14□□□□□ -0.63
COMMD9-202ENST00000355500 ZNF777Q9ULD5 760 aaPredicted RBP11.14□□□□□ -0.63
COMMD9-202ENST00000355500 MROH1Q8NDA8 1641 aa11.13□□□□□ -0.63
COMMD9-202ENST00000355500 SPHKAPQ2M3C7 1700 aa11.13□□□□□ -0.63
COMMD9-202ENST00000355500 E9PCH4 1651 aa11.13□□□□□ -0.63
COMMD9-202ENST00000355500 KIAA1210Q9ULL0 1709 aa11.12□□□□□ -0.63
COMMD9-202ENST00000355500 ESF1Q9H501 851 aaKnown RBP11.12□□□□□ -0.63
COMMD9-202ENST00000355500 CCDC7Q96M83 1385 aa11.12□□□□□ -0.63
COMMD9-202ENST00000355500 HNRNPMP52272 730 aaKnown RBP eCLIP11.11□□□□□ -0.63
COMMD9-202ENST00000355500 ROCK2O75116 1388 aaKnown RBP11.11□□□□□ -0.63
COMMD9-202ENST00000355500 GPRASP1Q5JY77 1395 aa11.11□□□□□ -0.63
COMMD9-202ENST00000355500 SLIT1O75093 1534 aa11.11□□□□□ -0.63
COMMD9-202ENST00000355500 STAC3Q96MF2 364 aa11.11□□□□□ -0.63
COMMD9-202ENST00000355500 ABCC3O15438 1527 aa11.11□□□□□ -0.63
COMMD9-202ENST00000355500 ANP32CO43423 234 aa11.1□□□□□ -0.63
COMMD9-202ENST00000355500 HSPA5P11021 654 aaKnown RBP11.1□□□□□ -0.63
COMMD9-202ENST00000355500 IQGAP1P46940 1657 aa11.1□□□□□ -0.63
COMMD9-202ENST00000355500 DEKP35659 375 aaKnown RBP11.1□□□□□ -0.63
COMMD9-202ENST00000355500 UBR1Q8IWV7 1749 aa11.09□□□□□ -0.63
COMMD9-202ENST00000355500 CCDC144AA2RUR9 1427 aa11.09□□□□□ -0.63
COMMD9-202ENST00000355500 ARHGAP23Q9P227 1491 aa11.09□□□□□ -0.63
COMMD9-202ENST00000355500 PRAG1Q86YV5 1406 aa11.08□□□□□ -0.64
COMMD9-202ENST00000355500 WASHC2AQ641Q2 1341 aa11.08□□□□□ -0.64
COMMD9-202ENST00000355500 ERICH6BQ5W0A0 696 aa11.08□□□□□ -0.64
COMMD9-202ENST00000355500 NBPF8Q3BBV2 869 aa11.08□□□□□ -0.64
COMMD9-202ENST00000355500 ZFP91Q96JP5 570 aaPredicted RBP11.08□□□□□ -0.64
COMMD9-202ENST00000355500 DDX10Q13206 875 aaKnown RBP11.07□□□□□ -0.64
COMMD9-202ENST00000355500 KTN1Q86UP2 1357 aaKnown RBP11.07□□□□□ -0.64
COMMD9-202ENST00000355500 TNRQ92752 1358 aa11.07□□□□□ -0.64
COMMD9-202ENST00000355500 SENP3Q9H4L4 574 aaPredicted RBP11.07□□□□□ -0.64
COMMD9-202ENST00000355500 ERVK-7P63135 1459 aa11.05□□□□□ -0.64
COMMD9-202ENST00000355500 IFT172Q9UG01 1749 aa11.05□□□□□ -0.64
COMMD9-202ENST00000355500 TMED8Q6PL24 325 aaPredicted RBP11.05□□□□□ -0.64
COMMD9-202ENST00000355500 ZNF592Q92610 1267 aa11.05□□□□□ -0.64
COMMD9-202ENST00000355500 EFCAB6Q5THR3 1501 aa11.05□□□□□ -0.64
COMMD9-202ENST00000355500 USP47Q96K76 1375 aa11.05□□□□□ -0.64
COMMD9-202ENST00000355500 HSPA2P54652 639 aa11.05□□□□□ -0.64
COMMD9-202ENST00000355500 UGGT1Q9NYU2 1555 aa11.04□□□□□ -0.64
COMMD9-202ENST00000355500 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.04□□□□□ -0.64
COMMD9-202ENST00000355500 FOXD1Q16676 465 aa11.04□□□□□ -0.64
COMMD9-202ENST00000355500 NECTIN2Q92692 538 aa11.04□□□□□ -0.64
COMMD9-202ENST00000355500 ZMYND15Q9H091 742 aa11.04□□□□□ -0.64
COMMD9-202ENST00000355500 NWD1Q149M9 1564 aa11.03□□□□□ -0.64
COMMD9-202ENST00000355500 ARID3AQ99856 593 aa11.03□□□□□ -0.64
COMMD9-202ENST00000355500 MYOM2P54296 1465 aa11.03□□□□□ -0.64
COMMD9-202ENST00000355500 CLTCL1P53675 1640 aa11.02□□□□□ -0.65
COMMD9-202ENST00000355500 TICAM2Q86XR7 235 aa11.02□□□□□ -0.65
COMMD9-202ENST00000355500 KANK1Q14678 1352 aa11.02□□□□□ -0.65
COMMD9-202ENST00000355500 MLECQ14165 292 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms