RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 NBR1Q14596 966 aa18.64■□□□□ 0.57
PGBD2-202ENST00000355360 WDR43Q15061 677 aaKnown RBP eCLIP18.64■□□□□ 0.57
PGBD2-202ENST00000355360 BLMP54132 1417 aaPredicted RBP18.63■□□□□ 0.57
PGBD2-202ENST00000355360 WASHC2CQ9Y4E1 1318 aa18.62■□□□□ 0.57
PGBD2-202ENST00000355360 SCAF11Q99590 1463 aaKnown RBP18.62■□□□□ 0.57
PGBD2-202ENST00000355360 GGT6Q6P531 493 aa18.62■□□□□ 0.57
PGBD2-202ENST00000355360 KANK1Q14678 1352 aa18.62■□□□□ 0.57
PGBD2-202ENST00000355360 PDE3BQ13370 1112 aa18.61■□□□□ 0.57
PGBD2-202ENST00000355360 PTPRTO14522 1441 aa18.61■□□□□ 0.57
PGBD2-202ENST00000355360 RTEL1-TNFRSF6BF6WH68 1400 aa18.61■□□□□ 0.57
PGBD2-202ENST00000355360 TNNT2P45379 298 aaPredicted RBP18.6■□□□□ 0.57
PGBD2-202ENST00000355360 NOP58Q9Y2X3 529 aaKnown RBP18.59■□□□□ 0.57
PGBD2-202ENST00000355360 ASXL2Q76L83 1435 aa18.59■□□□□ 0.57
PGBD2-202ENST00000355360 TET3O43151 1660 aa18.59■□□□□ 0.57
PGBD2-202ENST00000355360 INO80Q9ULG1 1556 aaPredicted RBP18.58■□□□□ 0.57
PGBD2-202ENST00000355360 TMEM132EQ6IEE7 984 aa18.58■□□□□ 0.57
PGBD2-202ENST00000355360 CARD14Q9BXL6 1004 aa18.58■□□□□ 0.57
PGBD2-202ENST00000355360 DEPDC5O75140 1603 aa18.58■□□□□ 0.56
PGBD2-202ENST00000355360 SPINK5Q9NQ38 1064 aaPredicted RBP18.58■□□□□ 0.56
PGBD2-202ENST00000355360 TRAK1Q9UPV9 953 aa18.58■□□□□ 0.56
PGBD2-202ENST00000355360 ABCA9Q8IUA7 1624 aa18.57■□□□□ 0.56
PGBD2-202ENST00000355360 MYOM1P52179 1685 aa18.57■□□□□ 0.56
PGBD2-202ENST00000355360 MROH1Q8NDA8 1641 aa18.56■□□□□ 0.56
PGBD2-202ENST00000355360 ZMYM4Q5VZL5 1548 aa18.56■□□□□ 0.56
PGBD2-202ENST00000355360 APAF1O14727 1248 aa18.56■□□□□ 0.56
PGBD2-202ENST00000355360 MROH2AA6NES4 1674 aa18.55■□□□□ 0.56
PGBD2-202ENST00000355360 DUSP27Q5VZP5 1158 aa18.55■□□□□ 0.56
PGBD2-202ENST00000355360 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
PGBD2-202ENST00000355360 ANP32AP39687 249 aaKnown RBP18.54■□□□□ 0.56
PGBD2-202ENST00000355360 ABCA6Q8N139 1617 aa18.54■□□□□ 0.56
PGBD2-202ENST00000355360 ASXL1Q8IXJ9 1541 aa18.53■□□□□ 0.56
PGBD2-202ENST00000355360 CDCA8Q53HL2 280 aa18.52■□□□□ 0.56
PGBD2-202ENST00000355360 NOS1P29475 1434 aa18.52■□□□□ 0.56
PGBD2-202ENST00000355360 KIDINS220Q9ULH0 1771 aa18.52■□□□□ 0.56
PGBD2-202ENST00000355360 ERVK-7P63135 1459 aa18.52■□□□□ 0.56
PGBD2-202ENST00000355360 SYNMO15061 1565 aa18.52■□□□□ 0.55
PGBD2-202ENST00000355360 PDE4AP27815 886 aa18.51■□□□□ 0.55
PGBD2-202ENST00000355360 VWDEQ8N2E2 1590 aa18.51■□□□□ 0.55
PGBD2-202ENST00000355360 PPRC1Q5VV67 1664 aaKnown RBP18.51■□□□□ 0.55
PGBD2-202ENST00000355360 NEUROD2Q15784 382 aa18.51■□□□□ 0.55
PGBD2-202ENST00000355360 IPO9Q96P70 1041 aaKnown RBP18.5■□□□□ 0.55
PGBD2-202ENST00000355360 ARAP3Q8WWN8 1544 aa18.5■□□□□ 0.55
PGBD2-202ENST00000355360 MAP3K4Q9Y6R4 1608 aa18.5■□□□□ 0.55
PGBD2-202ENST00000355360 RAPGEF3O95398 923 aa18.5■□□□□ 0.55
PGBD2-202ENST00000355360 GOLGA2Q08379 1002 aa18.5■□□□□ 0.55
PGBD2-202ENST00000355360 SAFB2Q14151 953 aaKnown RBP eCLIP18.5■□□□□ 0.55
PGBD2-202ENST00000355360 SLC12A5Q9H2X9 1139 aa18.5■□□□□ 0.55
PGBD2-202ENST00000355360 EIF3AQ14152 1382 aaKnown RBP18.5■□□□□ 0.55
PGBD2-202ENST00000355360 KIF1BO60333 1816 aa18.49■□□□□ 0.55
PGBD2-202ENST00000355360 KDM5AP29375 1690 aaKnown RBP18.49■□□□□ 0.55
PGBD2-202ENST00000355360 BCAR3O75815 825 aa18.48■□□□□ 0.55
PGBD2-202ENST00000355360 RRP7AQ9Y3A4 280 aaKnown RBP18.48■□□□□ 0.55
PGBD2-202ENST00000355360 ZNF521Q96K83 1311 aa18.47■□□□□ 0.55
PGBD2-202ENST00000355360 EFCAB6Q5THR3 1501 aa18.46■□□□□ 0.55
PGBD2-202ENST00000355360 NPM1P06748 294 aaKnown RBP eCLIP18.46■□□□□ 0.55
PGBD2-202ENST00000355360 ZBTB47Q9UFB7 747 aaPredicted RBP18.46■□□□□ 0.55
PGBD2-202ENST00000355360 TCERG1O14776 1098 aaKnown RBP18.44■□□□□ 0.54
PGBD2-202ENST00000355360 SLFN5Q08AF3 891 aa18.44■□□□□ 0.54
PGBD2-202ENST00000355360 CENPJQ9HC77 1338 aaPredicted RBP18.44■□□□□ 0.54
PGBD2-202ENST00000355360 BACH2Q9BYV9 841 aa18.44■□□□□ 0.54
PGBD2-202ENST00000355360 NPATQ14207 1427 aa18.44■□□□□ 0.54
PGBD2-202ENST00000355360 PIK3C2GO75747 1445 aa18.42■□□□□ 0.54
PGBD2-202ENST00000355360 CD109Q6YHK3 1445 aa18.42■□□□□ 0.54
PGBD2-202ENST00000355360 BCL11AQ9H165 835 aa18.41■□□□□ 0.54
PGBD2-202ENST00000355360 LAS1LQ9Y4W2 734 aaKnown RBP18.41■□□□□ 0.54
PGBD2-202ENST00000355360 ZNF518AQ6AHZ1 1483 aa18.41■□□□□ 0.54
PGBD2-202ENST00000355360 NSD3Q9BZ95 1437 aa18.41■□□□□ 0.54
PGBD2-202ENST00000355360 STAC3Q96MF2 364 aa18.4■□□□□ 0.54
PGBD2-202ENST00000355360 IFT172Q9UG01 1749 aa18.4■□□□□ 0.54
PGBD2-202ENST00000355360 MYOM2P54296 1465 aa18.4■□□□□ 0.54
PGBD2-202ENST00000355360 RGS3P49796 1198 aa18.4■□□□□ 0.54
PGBD2-202ENST00000355360 MORC1Q86VD1 984 aa18.39■□□□□ 0.53
PGBD2-202ENST00000355360 STK26Q9P289 416 aa18.39■□□□□ 0.53
PGBD2-202ENST00000355360 KIAA1210Q9ULL0 1709 aa18.39■□□□□ 0.53
PGBD2-202ENST00000355360 INSRP06213 1382 aa18.39■□□□□ 0.53
PGBD2-202ENST00000355360 FRMPD1Q5SYB0 1578 aa18.38■□□□□ 0.53
PGBD2-202ENST00000355360 DEKP35659 375 aaKnown RBP18.37■□□□□ 0.53
PGBD2-202ENST00000355360 SLC4A3P48751 1232 aa18.36■□□□□ 0.53
PGBD2-202ENST00000355360 CABP2Q9NPB3 220 aa18.36■□□□□ 0.53
PGBD2-202ENST00000355360 OSCARQ8IYS5 282 aa18.36■□□□□ 0.53
PGBD2-202ENST00000355360 KDM2BQ8NHM5 1336 aa18.35■□□□□ 0.53
PGBD2-202ENST00000355360 BCL2L13Q9BXK5 485 aa18.35■□□□□ 0.53
PGBD2-202ENST00000355360 C14orf93Q9H972 538 aaKnown RBP18.35■□□□□ 0.53
PGBD2-202ENST00000355360 ADGRB3O60242 1522 aa18.35■□□□□ 0.53
PGBD2-202ENST00000355360 POGZQ7Z3K3 1410 aa18.35■□□□□ 0.53
PGBD2-202ENST00000355360 TNNQ9UQP3 1299 aa18.34■□□□□ 0.53
PGBD2-202ENST00000355360 NPC1L1Q9UHC9 1359 aa18.34■□□□□ 0.53
PGBD2-202ENST00000355360 MTHFSP49914 203 aa18.33■□□□□ 0.53
PGBD2-202ENST00000355360 TRMT2AQ8IZ69 625 aaKnown RBP18.33■□□□□ 0.53
PGBD2-202ENST00000355360 PANK1Q8TE04 598 aa18.33■□□□□ 0.53
PGBD2-202ENST00000355360 FRAT1Q92837 279 aaPredicted RBP18.33■□□□□ 0.53
PGBD2-202ENST00000355360 QRICH2Q9H0J4 1663 aa18.33■□□□□ 0.52
PGBD2-202ENST00000355360 WWC1Q8IX03 1113 aa18.33■□□□□ 0.52
PGBD2-202ENST00000355360 SIGLEC1Q9BZZ2 1709 aa18.33■□□□□ 0.52
PGBD2-202ENST00000355360 NRXN1Q9ULB1 1477 aa18.32■□□□□ 0.52
PGBD2-202ENST00000355360 PPLO60437 1756 aa18.32■□□□□ 0.52
PGBD2-202ENST00000355360 NKTRP30414 1462 aaKnown RBP18.31■□□□□ 0.52
PGBD2-202ENST00000355360 MS4A1P11836 297 aa18.31■□□□□ 0.52
PGBD2-202ENST00000355360 COG6Q9Y2V7 657 aa18.31■□□□□ 0.52
PGBD2-202ENST00000355360 IDI1Q13907 227 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms