RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 KDM5AP29375 1690 aaKnown RBP13.58□□□□□ -0.24
NPHP1-202ENST00000355301 HSPA5P11021 654 aaKnown RBP13.58□□□□□ -0.24
NPHP1-202ENST00000355301 CARD11Q9BXL7 1154 aa13.57□□□□□ -0.24
NPHP1-202ENST00000355301 ZFYVE9O95405 1425 aa13.57□□□□□ -0.24
NPHP1-202ENST00000355301 ADGRF5Q8IZF2 1346 aa13.57□□□□□ -0.24
NPHP1-202ENST00000355301 A2ML1A8K2U0 1454 aa13.57□□□□□ -0.24
NPHP1-202ENST00000355301 CEBPAP49715 358 aaPredicted RBP13.56□□□□□ -0.24
NPHP1-202ENST00000355301 RIMS1Q86UR5 1692 aaKnown RBP13.56□□□□□ -0.24
NPHP1-202ENST00000355301 USP47Q96K76 1375 aa13.56□□□□□ -0.24
NPHP1-202ENST00000355301 PIK3C2GO75747 1445 aa13.56□□□□□ -0.24
NPHP1-202ENST00000355301 NBPF1Q3BBV0 1214 aa13.56□□□□□ -0.24
NPHP1-202ENST00000355301 HIRIP3Q9BW71 556 aaPredicted RBP13.56□□□□□ -0.24
NPHP1-202ENST00000355301 NLRP1Q9C000 1473 aa13.56□□□□□ -0.24
NPHP1-202ENST00000355301 VGFO15240 615 aaPredicted RBP13.55□□□□□ -0.24
NPHP1-202ENST00000355301 STAG3Q9UJ98 1225 aa13.54□□□□□ -0.24
NPHP1-202ENST00000355301 UBR1Q8IWV7 1749 aa13.53□□□□□ -0.24
NPHP1-202ENST00000355301 DIEXFQ68CQ4 756 aaKnown RBP13.52□□□□□ -0.25
NPHP1-202ENST00000355301 SETBP1Q9Y6X0 1596 aa13.51□□□□□ -0.25
NPHP1-202ENST00000355301 CFAP70Q5T0N1 1121 aa13.51□□□□□ -0.25
NPHP1-202ENST00000355301 C14orf93Q9H972 538 aaKnown RBP13.51□□□□□ -0.25
NPHP1-202ENST00000355301 IQGAP1P46940 1657 aa13.5□□□□□ -0.25
NPHP1-202ENST00000355301 MYO3AQ8NEV4 1616 aa13.5□□□□□ -0.25
NPHP1-202ENST00000355301 RIMS2Q9UQ26 1411 aa13.5□□□□□ -0.25
NPHP1-202ENST00000355301 NUTM2DQ5VT03 806 aaPredicted RBP13.49□□□□□ -0.25
NPHP1-202ENST00000355301 SCAF11Q99590 1463 aaKnown RBP13.49□□□□□ -0.25
NPHP1-202ENST00000355301 POLR1AO95602 1720 aaPredicted RBP13.48□□□□□ -0.25
NPHP1-202ENST00000355301 TMEM2Q9UHN6 1383 aa13.48□□□□□ -0.25
NPHP1-202ENST00000355301 ADGRB1O14514 1584 aa13.48□□□□□ -0.25
NPHP1-202ENST00000355301 ST20-MTHFSA0A0A6YYL1 179 aa13.48□□□□□ -0.25
NPHP1-202ENST00000355301 PLPPR3Q6T4P5 718 aa13.47□□□□□ -0.25
NPHP1-202ENST00000355301 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.47□□□□□ -0.25
NPHP1-202ENST00000355301 WASHC2AQ641Q2 1341 aa13.47□□□□□ -0.25
NPHP1-202ENST00000355301 HDGFP51858 240 aaKnown RBP13.47□□□□□ -0.25
NPHP1-202ENST00000355301 PTPRMP28827 1452 aa13.46□□□□□ -0.25
NPHP1-202ENST00000355301 SLIT1O75093 1534 aa13.46□□□□□ -0.26
NPHP1-202ENST00000355301 CEP170BQ9Y4F5 1589 aaPredicted RBP13.45□□□□□ -0.26
NPHP1-202ENST00000355301 C11orf95C9JLR9 678 aaPredicted RBP13.45□□□□□ -0.26
NPHP1-202ENST00000355301 SETD1BQ9UPS6 1966 aaKnown RBP13.45□□□□□ -0.26
NPHP1-202ENST00000355301 EIF3AQ14152 1382 aaKnown RBP13.44□□□□□ -0.26
NPHP1-202ENST00000355301 ARHGAP23Q9P227 1491 aa13.44□□□□□ -0.26
NPHP1-202ENST00000355301 ZNF142P52746 1687 aaPredicted RBP13.44□□□□□ -0.26
NPHP1-202ENST00000355301 ALKQ9UM73 1620 aa13.44□□□□□ -0.26
NPHP1-202ENST00000355301 CCDC7Q96M83 1385 aa13.44□□□□□ -0.26
NPHP1-202ENST00000355301 THEMISQ8N1K5 641 aaPredicted RBP13.43□□□□□ -0.26
NPHP1-202ENST00000355301 TESK2Q96S53 571 aa13.43□□□□□ -0.26
NPHP1-202ENST00000355301 NRXN3Q9Y4C0 1643 aa13.42□□□□□ -0.26
NPHP1-202ENST00000355301 ASXL1Q8IXJ9 1541 aa13.42□□□□□ -0.26
NPHP1-202ENST00000355301 KIF7Q2M1P5 1343 aa13.42□□□□□ -0.26
NPHP1-202ENST00000355301 DDX10Q13206 875 aaKnown RBP13.42□□□□□ -0.26
NPHP1-202ENST00000355301 SETD1AO15047 1707 aaKnown RBP13.42□□□□□ -0.26
NPHP1-202ENST00000355301 TMEM132EQ6IEE7 984 aa13.41□□□□□ -0.26
NPHP1-202ENST00000355301 PLEKHG1Q9ULL1 1385 aa13.4□□□□□ -0.27
NPHP1-202ENST00000355301 LTKP29376 864 aa13.39□□□□□ -0.27
NPHP1-202ENST00000355301 EID1Q9Y6B2 187 aa13.39□□□□□ -0.27
NPHP1-202ENST00000355301 TXNDC2Q86VQ3 553 aa13.39□□□□□ -0.27
NPHP1-202ENST00000355301 SBNO2Q9Y2G9 1366 aa13.38□□□□□ -0.27
NPHP1-202ENST00000355301 ARHGEF28Q8N1W1 1705 aaKnown RBP13.38□□□□□ -0.27
NPHP1-202ENST00000355301 SLC24A1O60721 1099 aa13.38□□□□□ -0.27
NPHP1-202ENST00000355301 TRAK1Q9UPV9 953 aa13.38□□□□□ -0.27
NPHP1-202ENST00000355301 YTHDC2Q9H6S0 1430 aaKnown RBP13.38□□□□□ -0.27
NPHP1-202ENST00000355301 TMF1P82094 1093 aa13.37□□□□□ -0.27
NPHP1-202ENST00000355301 SENP3Q9H4L4 574 aaPredicted RBP13.37□□□□□ -0.27
NPHP1-202ENST00000355301 DISP3Q9P2K9 1392 aa13.36□□□□□ -0.27
NPHP1-202ENST00000355301 ADAMTS13Q76LX8 1427 aa13.36□□□□□ -0.27
NPHP1-202ENST00000355301 CENPJQ9HC77 1338 aaPredicted RBP13.36□□□□□ -0.27
NPHP1-202ENST00000355301 MED14O60244 1454 aa13.35□□□□□ -0.27
NPHP1-202ENST00000355301 KDM4FA0A1W2PPD8 638 aa13.35□□□□□ -0.27
NPHP1-202ENST00000355301 QRICH2Q9H0J4 1663 aa13.35□□□□□ -0.27
NPHP1-202ENST00000355301 METP08581 1390 aa13.34□□□□□ -0.27
NPHP1-202ENST00000355301 LRPPRCP42704 1394 aaKnown RBP13.34□□□□□ -0.27
NPHP1-202ENST00000355301 DLC1Q96QB1 1528 aa13.33□□□□□ -0.27
NPHP1-202ENST00000355301 ABCC11Q96J66 1382 aa13.33□□□□□ -0.27
NPHP1-202ENST00000355301 DIP2AQ14689 1571 aa13.33□□□□□ -0.28
NPHP1-202ENST00000355301 CDCA8Q53HL2 280 aa13.33□□□□□ -0.28
NPHP1-202ENST00000355301 BCANQ96GW7 911 aa13.33□□□□□ -0.28
NPHP1-202ENST00000355301 MIER1Q8N108 512 aa13.32□□□□□ -0.28
NPHP1-202ENST00000355301 STK26Q9P289 416 aa13.32□□□□□ -0.28
NPHP1-202ENST00000355301 TECPR2O15040 1411 aa13.32□□□□□ -0.28
NPHP1-202ENST00000355301 KNDC1Q76NI1 1749 aa13.32□□□□□ -0.28
NPHP1-202ENST00000355301 ANKLE2Q86XL3 938 aa13.31□□□□□ -0.28
NPHP1-202ENST00000355301 POLR3GLQ9BT43 218 aa13.31□□□□□ -0.28
NPHP1-202ENST00000355301 TBX22Q9Y458 520 aa13.31□□□□□ -0.28
NPHP1-202ENST00000355301 PRAM1Q96QH2 718 aa13.29□□□□□ -0.28
NPHP1-202ENST00000355301 CPS1P31327 1500 aa13.29□□□□□ -0.28
NPHP1-202ENST00000355301 SIRT1Q96EB6 747 aa13.29□□□□□ -0.28
NPHP1-202ENST00000355301 SLC26A8Q96RN1 970 aa13.29□□□□□ -0.28
NPHP1-202ENST00000355301 FAM135BQ49AJ0 1406 aa13.28□□□□□ -0.28
NPHP1-202ENST00000355301 POGKQ9P215 609 aa13.27□□□□□ -0.28
NPHP1-202ENST00000355301 TULP4Q9NRJ4 1543 aa13.27□□□□□ -0.29
NPHP1-202ENST00000355301 PUS7Q96PZ0 661 aaKnown RBP13.27□□□□□ -0.29
NPHP1-202ENST00000355301 PIK3R4Q99570 1358 aa13.27□□□□□ -0.29
NPHP1-202ENST00000355301 MYOM1P52179 1685 aa13.26□□□□□ -0.29
NPHP1-202ENST00000355301 PTPRUQ92729 1446 aa13.26□□□□□ -0.29
NPHP1-202ENST00000355301 EVC2Q86UK5 1308 aa13.26□□□□□ -0.29
NPHP1-202ENST00000355301 ANP32CO43423 234 aa13.25□□□□□ -0.29
NPHP1-202ENST00000355301 SAFB2Q14151 953 aaKnown RBP eCLIP13.25□□□□□ -0.29
NPHP1-202ENST00000355301 NPHP4O75161 1426 aaPredicted RBP13.25□□□□□ -0.29
NPHP1-202ENST00000355301 PLEKHH1Q9ULM0 1364 aa13.24□□□□□ -0.29
NPHP1-202ENST00000355301 WAPLQ7Z5K2 1190 aa13.24□□□□□ -0.29
NPHP1-202ENST00000355301 XRN1Q8IZH2 1706 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms