RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 SYNE3Q6ZMZ3 975 aa16.25■□□□□ 0.19
SCN8A-202ENST00000355133 PDE4AP27815 886 aa16.24■□□□□ 0.19
SCN8A-202ENST00000355133 NOL10Q9BSC4 688 aaKnown RBP16.24■□□□□ 0.19
SCN8A-202ENST00000355133 APPP05067 770 aa16.24■□□□□ 0.19
SCN8A-202ENST00000355133 MEX3CQ5U5Q3 659 aaKnown RBP16.24■□□□□ 0.19
SCN8A-202ENST00000355133 IFIT2P09913 472 aaKnown RBP16.23■□□□□ 0.19
SCN8A-202ENST00000355133 FBXW7Q969H0 707 aa16.23■□□□□ 0.19
SCN8A-202ENST00000355133 TRIM34Q9BYJ4 488 aa16.23■□□□□ 0.19
SCN8A-202ENST00000355133 FANCD2Q9BXW9 1451 aa16.23■□□□□ 0.19
SCN8A-202ENST00000355133 DDX11L8A8MPP1 907 aa16.23■□□□□ 0.19
SCN8A-202ENST00000355133 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
SCN8A-202ENST00000355133 GOLGA6L1Q8N7Z2 621 aa16.22■□□□□ 0.19
SCN8A-202ENST00000355133 DDX49Q9Y6V7 483 aaKnown RBP16.22■□□□□ 0.19
SCN8A-202ENST00000355133 RUSC2Q8N2Y8 1516 aa16.22■□□□□ 0.19
SCN8A-202ENST00000355133 FKBP5Q13451 457 aaPredicted RBP16.22■□□□□ 0.19
SCN8A-202ENST00000355133 AMOTL1Q8IY63 956 aa16.22■□□□□ 0.19
SCN8A-202ENST00000355133 ANO2Q9NQ90 1003 aa16.21■□□□□ 0.19
SCN8A-202ENST00000355133 VPS37DQ86XT2 251 aa16.21■□□□□ 0.19
SCN8A-202ENST00000355133 LRRFIP1Q32MZ4 808 aaKnown RBP16.21■□□□□ 0.18
SCN8A-202ENST00000355133 WWC1Q8IX03 1113 aa16.2■□□□□ 0.18
SCN8A-202ENST00000355133 RUFY2Q8WXA3 655 aa16.2■□□□□ 0.18
SCN8A-202ENST00000355133 DDX19BQ9UMR2 479 aa16.2■□□□□ 0.18
SCN8A-202ENST00000355133 HMOX1P09601 288 aa16.2■□□□□ 0.18
SCN8A-202ENST00000355133 FAM69CQ0P6D2 419 aa16.2■□□□□ 0.18
SCN8A-202ENST00000355133 DDX58O95786 925 aaKnown RBP16.2■□□□□ 0.18
SCN8A-202ENST00000355133 ATP6V1DQ9Y5K8 247 aa16.2■□□□□ 0.18
SCN8A-202ENST00000355133 ATAD2BQ9ULI0 1458 aa16.19■□□□□ 0.18
SCN8A-202ENST00000355133 GOLGA6L19H0YKK7 550 aa16.19■□□□□ 0.18
SCN8A-202ENST00000355133 NUTM2GQ5VZR2 741 aa16.19■□□□□ 0.18
SCN8A-202ENST00000355133 DZIP1LQ8IYY4 767 aaKnown RBP16.19■□□□□ 0.18
SCN8A-202ENST00000355133 CTDP1Q9Y5B0 961 aaPredicted RBP16.19■□□□□ 0.18
SCN8A-202ENST00000355133 BECN2A8MW95 431 aa16.19■□□□□ 0.18
SCN8A-202ENST00000355133 DHX16O60231 1041 aaKnown RBP16.19■□□□□ 0.18
SCN8A-202ENST00000355133 CHMP4CQ96CF2 233 aa16.19■□□□□ 0.18
SCN8A-202ENST00000355133 ZKSCAN1P17029 563 aaPredicted RBP16.18■□□□□ 0.18
SCN8A-202ENST00000355133 G3BP1Q13283 466 aaKnown RBP eCLIP16.18■□□□□ 0.18
SCN8A-202ENST00000355133 API5Q9BZZ5 524 aaKnown RBP16.18■□□□□ 0.18
SCN8A-202ENST00000355133 TSR1Q2NL82 804 aaKnown RBP16.18■□□□□ 0.18
SCN8A-202ENST00000355133 TCEAL9Q9UHQ7 104 aa16.18■□□□□ 0.18
SCN8A-202ENST00000355133 TRIM29Q14134 588 aa16.18■□□□□ 0.18
SCN8A-202ENST00000355133 ZBED9Q6R2W3 1325 aa16.18■□□□□ 0.18
SCN8A-202ENST00000355133 CPLX2Q6PUV4 134 aaKnown RBP16.18■□□□□ 0.18
SCN8A-202ENST00000355133 TSPYL4Q9UJ04 414 aa16.18■□□□□ 0.18
SCN8A-202ENST00000355133 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.17■□□□□ 0.18
SCN8A-202ENST00000355133 CPLX1O14810 134 aa16.16■□□□□ 0.18
SCN8A-202ENST00000355133 REC8O95072 547 aa16.16■□□□□ 0.18
SCN8A-202ENST00000355133 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.16■□□□□ 0.18
SCN8A-202ENST00000355133 ZNF644Q9H582 1327 aaPredicted RBP16.16■□□□□ 0.18
SCN8A-202ENST00000355133 CCAR2Q8N163 923 aaKnown RBP16.16■□□□□ 0.18
SCN8A-202ENST00000355133 AIMP1Q12904 312 aaKnown RBP16.15■□□□□ 0.18
SCN8A-202ENST00000355133 RUNDC1Q96C34 613 aa16.15■□□□□ 0.18
SCN8A-202ENST00000355133 TPM2P07951 284 aa16.15■□□□□ 0.18
SCN8A-202ENST00000355133 GGNBP2Q9H3C7 697 aa16.15■□□□□ 0.18
SCN8A-202ENST00000355133 RAPGEF4Q8WZA2 1011 aa16.15■□□□□ 0.18
SCN8A-202ENST00000355133 CABP2Q9NPB3 220 aa16.14■□□□□ 0.18
SCN8A-202ENST00000355133 ATF3P18847 181 aa16.14■□□□□ 0.17
SCN8A-202ENST00000355133 NFXL1Q6ZNB6 911 aa16.14■□□□□ 0.17
SCN8A-202ENST00000355133 KLHL34Q8N239 644 aa16.14■□□□□ 0.17
SCN8A-202ENST00000355133 NLRP2Q9NX02 1062 aa16.14■□□□□ 0.17
SCN8A-202ENST00000355133 TRDNQ13061 729 aa16.13■□□□□ 0.17
SCN8A-202ENST00000355133 FOSBP53539 338 aa16.13■□□□□ 0.17
SCN8A-202ENST00000355133 PCMTD1Q96MG8 357 aaPredicted RBP16.13■□□□□ 0.17
SCN8A-202ENST00000355133 TPM1P09493 284 aa16.12■□□□□ 0.17
SCN8A-202ENST00000355133 TMEM132EQ6IEE7 984 aa16.12■□□□□ 0.17
SCN8A-202ENST00000355133 RIC3Q7Z5B4 369 aa16.12■□□□□ 0.17
SCN8A-202ENST00000355133 SAMD1Q6SPF0 538 aaPredicted RBP16.12■□□□□ 0.17
SCN8A-202ENST00000355133 GNAI1P63096 354 aa16.12■□□□□ 0.17
SCN8A-202ENST00000355133 SKOR2Q2VWA4 1001 aaPredicted RBP16.11■□□□□ 0.17
SCN8A-202ENST00000355133 NEUROD6Q96NK8 337 aa16.11■□□□□ 0.17
SCN8A-202ENST00000355133 ROCK1Q13464 1354 aa16.11■□□□□ 0.17
SCN8A-202ENST00000355133 TNNT3P45378 269 aaPredicted RBP16.11■□□□□ 0.17
SCN8A-202ENST00000355133 MYOM3Q5VTT5 1437 aa16.11■□□□□ 0.17
SCN8A-202ENST00000355133 RNF20Q5VTR2 975 aa16.11■□□□□ 0.17
SCN8A-202ENST00000355133 LNPKQ9C0E8 428 aa16.1■□□□□ 0.17
SCN8A-202ENST00000355133 BICD2Q8TD16 824 aa16.09■□□□□ 0.17
SCN8A-202ENST00000355133 RBM33Q96EV2 1170 aaKnown RBP16.09■□□□□ 0.17
SCN8A-202ENST00000355133 ERICH2A1L162 156 aa16.09■□□□□ 0.17
SCN8A-202ENST00000355133 FYB1O15117 783 aa16.09■□□□□ 0.17
SCN8A-202ENST00000355133 AEBP2Q6ZN18 517 aaPredicted RBP16.09■□□□□ 0.17
SCN8A-202ENST00000355133 VPS37CA5D8V6 355 aaPredicted RBP16.09■□□□□ 0.17
SCN8A-202ENST00000355133 GAPVD1Q14C86 1478 aa16.09■□□□□ 0.17
SCN8A-202ENST00000355133 NLRP6P59044 892 aa16.08■□□□□ 0.16
SCN8A-202ENST00000355133 ZNF592Q92610 1267 aa16.08■□□□□ 0.16
SCN8A-202ENST00000355133 RAD54L2Q9Y4B4 1467 aa16.08■□□□□ 0.16
SCN8A-202ENST00000355133 CCDC47Q96A33 483 aaKnown RBP16.07■□□□□ 0.16
SCN8A-202ENST00000355133 WASHC4Q2M389 1173 aa16.07■□□□□ 0.16
SCN8A-202ENST00000355133 SMARCA4P51532 1647 aa16.07■□□□□ 0.16
SCN8A-202ENST00000355133 INTS3Q68E01 1043 aaKnown RBP16.07■□□□□ 0.16
SCN8A-202ENST00000355133 PANK1Q8TE04 598 aa16.07■□□□□ 0.16
SCN8A-202ENST00000355133 KIF7Q2M1P5 1343 aa16.06■□□□□ 0.16
SCN8A-202ENST00000355133 ERC2O15083 957 aa16.06■□□□□ 0.16
SCN8A-202ENST00000355133 CCDC27Q2M243 656 aa16.06■□□□□ 0.16
SCN8A-202ENST00000355133 HSP90AB4PQ58FF6 505 aa16.06■□□□□ 0.16
SCN8A-202ENST00000355133 USP35Q9P2H5 1018 aa16.06■□□□□ 0.16
SCN8A-202ENST00000355133 SMC3Q9UQE7 1217 aa16.06■□□□□ 0.16
SCN8A-202ENST00000355133 FGD5Q6ZNL6 1462 aa16.05■□□□□ 0.16
SCN8A-202ENST00000355133 GSE1Q14687 1217 aa16.05■□□□□ 0.16
SCN8A-202ENST00000355133 FAM177BA6PVY3 158 aa16.04■□□□□ 0.16
SCN8A-202ENST00000355133 UBTFL1P0CB47 393 aaPredicted RBP16.04■□□□□ 0.16
SCN8A-202ENST00000355133 CWC22Q9HCG8 908 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms