RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 CCDC191Q8NCU4 936 aa7.03□□□□□ -1.28
SRGAP1-201ENST00000355086 EIF2S2P20042 333 aaKnown RBP7.03□□□□□ -1.28
SRGAP1-201ENST00000355086 RBM33Q96EV2 1170 aaKnown RBP7.03□□□□□ -1.28
SRGAP1-201ENST00000355086 TMEM132AQ24JP5 1023 aa7.03□□□□□ -1.28
SRGAP1-201ENST00000355086 IFIT2P09913 472 aaKnown RBP7.03□□□□□ -1.28
SRGAP1-201ENST00000355086 NOM1Q5C9Z4 860 aaKnown RBP7.02□□□□□ -1.28
SRGAP1-201ENST00000355086 RNF20Q5VTR2 975 aa7.02□□□□□ -1.28
SRGAP1-201ENST00000355086 SASS6Q6UVJ0 657 aa7.02□□□□□ -1.28
SRGAP1-201ENST00000355086 OFD1O75665 1012 aa7.02□□□□□ -1.29
SRGAP1-201ENST00000355086 RRP7AQ9Y3A4 280 aaKnown RBP7.02□□□□□ -1.29
SRGAP1-201ENST00000355086 WRNQ14191 1432 aaPredicted RBP eCLIP7.02□□□□□ -1.29
SRGAP1-201ENST00000355086 COG3Q96JB2 828 aa7.02□□□□□ -1.29
SRGAP1-201ENST00000355086 NUP155O75694 1391 aa7.02□□□□□ -1.29
SRGAP1-201ENST00000355086 PDE3BQ13370 1112 aa7.02□□□□□ -1.29
SRGAP1-201ENST00000355086 DCTN1Q14203 1278 aa7.02□□□□□ -1.29
SRGAP1-201ENST00000355086 TRAK1Q9UPV9 953 aa7.02□□□□□ -1.29
SRGAP1-201ENST00000355086 ELL2O00472 640 aaPredicted RBP7.02□□□□□ -1.29
SRGAP1-201ENST00000355086 CAGE1Q8TC20 777 aa7.02□□□□□ -1.29
SRGAP1-201ENST00000355086 DCAF8L1A6NGE4 600 aa7.02□□□□□ -1.29
SRGAP1-201ENST00000355086 WWC2Q6AWC2 1192 aa7.02□□□□□ -1.29
SRGAP1-201ENST00000355086 PHLDB1Q86UU1 1377 aa7.02□□□□□ -1.29
SRGAP1-201ENST00000355086 REC8O95072 547 aa7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 ARGLU1Q9NWB6 273 aaPredicted RBP7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 WASHC2CQ9Y4E1 1318 aa7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 TNIKQ9UKE5 1360 aa7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 MPHOSPH9Q99550 1183 aa7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 BRMS1Q9HCU9 246 aa7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 FOSBP53539 338 aa7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 CCDC180Q9P1Z9 1646 aa7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 PHF23Q9BUL5 403 aaPredicted RBP7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 FYB1O15117 783 aa7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 HSP90B2PQ58FF3 399 aa7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 SETD5Q9C0A6 1442 aa7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 G3BP1Q13283 466 aaKnown RBP eCLIP7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 CCDC27Q2M243 656 aa7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 MNS1Q8NEH6 495 aa7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 IFT57Q9NWB7 429 aa7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 KIF3BO15066 747 aa7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 IKQ13123 557 aaPredicted RBP7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 CENPQQ7L2Z9 268 aaPredicted RBP7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 ZRSR2Q15696 482 aaKnown RBP7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 EFCAB2Q5VUJ9 269 aa7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 NLRP13Q86W25 1043 aa7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 DDX58O95786 925 aaKnown RBP7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 BCL2L13Q9BXK5 485 aa7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 ARHGAP35Q9NRY4 1499 aa7.01□□□□□ -1.29
SRGAP1-201ENST00000355086 CCAR1Q8IX12 1150 aaKnown RBP7□□□□□ -1.29
SRGAP1-201ENST00000355086 CGNL1Q0VF96 1302 aa7□□□□□ -1.29
SRGAP1-201ENST00000355086 OLFM4Q6UX06 510 aa7□□□□□ -1.29
SRGAP1-201ENST00000355086 FAM13BQ9NYF5 915 aa7□□□□□ -1.29
SRGAP1-201ENST00000355086 FAM161AQ3B820 660 aa7□□□□□ -1.29
SRGAP1-201ENST00000355086 NECTIN2Q92692 538 aa7□□□□□ -1.29
SRGAP1-201ENST00000355086 VSIG10Q8N0Z9 540 aa7□□□□□ -1.29
SRGAP1-201ENST00000355086 XBP1P17861 261 aa7□□□□□ -1.29
SRGAP1-201ENST00000355086 SMC3Q9UQE7 1217 aa7□□□□□ -1.29
SRGAP1-201ENST00000355086 ZKSCAN2Q63HK3 967 aa7□□□□□ -1.29
SRGAP1-201ENST00000355086 NEFHP12036 1026 aa6.99□□□□□ -1.29
SRGAP1-201ENST00000355086 PDILTQ8N807 584 aa6.99□□□□□ -1.29
SRGAP1-201ENST00000355086 BAZ1BQ9UIG0 1483 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-201ENST00000355086 TTLL5Q6EMB2 1281 aa6.99□□□□□ -1.29
SRGAP1-201ENST00000355086 H0YHG0 523 aa6.99□□□□□ -1.29
SRGAP1-201ENST00000355086 VPS37CA5D8V6 355 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-201ENST00000355086 MTMR7Q9Y216 660 aa6.99□□□□□ -1.29
SRGAP1-201ENST00000355086 CCDC73Q6ZRK6 1079 aa6.99□□□□□ -1.29
SRGAP1-201ENST00000355086 SKIDA1Q1XH10 827 aa6.98□□□□□ -1.29
SRGAP1-201ENST00000355086 CARMIL1Q5VZK9 1371 aa6.98□□□□□ -1.29
SRGAP1-201ENST00000355086 SLC4A3P48751 1232 aa6.98□□□□□ -1.29
SRGAP1-201ENST00000355086 CWC15Q9P013 229 aaKnown RBP6.98□□□□□ -1.29
SRGAP1-201ENST00000355086 RALYLQ86SE5 291 aaKnown RBP6.98□□□□□ -1.29
SRGAP1-201ENST00000355086 ANKRD30AQ9BXX3 1397 aa6.98□□□□□ -1.29
SRGAP1-201ENST00000355086 E9PSI1 815 aa6.98□□□□□ -1.29
SRGAP1-201ENST00000355086 SEPT7Q16181 437 aaKnown RBP6.98□□□□□ -1.29
SRGAP1-201ENST00000355086 PLCD4Q9BRC7 762 aa6.98□□□□□ -1.29
SRGAP1-201ENST00000355086 ERC2O15083 957 aa6.98□□□□□ -1.29
SRGAP1-201ENST00000355086 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-201ENST00000355086 ERCC4Q92889 916 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-201ENST00000355086 BCL11BQ9C0K0 894 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-201ENST00000355086 PSME1Q06323 249 aa6.97□□□□□ -1.29
SRGAP1-201ENST00000355086 WASHC4Q2M389 1173 aa6.97□□□□□ -1.29
SRGAP1-201ENST00000355086 NAT10Q9H0A0 1025 aaKnown RBP6.97□□□□□ -1.29
SRGAP1-201ENST00000355086 MAGEC2Q9UBF1 373 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-201ENST00000355086 SYCP1Q15431 976 aa6.97□□□□□ -1.29
SRGAP1-201ENST00000355086 CDK5RAP3Q96JB5 506 aa6.97□□□□□ -1.29
SRGAP1-201ENST00000355086 CARMIL2Q6F5E8 1435 aa6.97□□□□□ -1.29
SRGAP1-201ENST00000355086 AEBP2Q6ZN18 517 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-201ENST00000355086 ROCK1Q13464 1354 aa6.96□□□□□ -1.29
SRGAP1-201ENST00000355086 KIF15Q9NS87 1388 aa6.96□□□□□ -1.3
SRGAP1-201ENST00000355086 NUCB2P80303 420 aa6.96□□□□□ -1.3
SRGAP1-201ENST00000355086 GSE1Q14687 1217 aa6.96□□□□□ -1.3
SRGAP1-201ENST00000355086 RIC3Q7Z5B4 369 aa6.96□□□□□ -1.3
SRGAP1-201ENST00000355086 ERLIN2O94905 339 aa6.96□□□□□ -1.3
SRGAP1-201ENST00000355086 FKBP5Q13451 457 aaPredicted RBP6.96□□□□□ -1.3
SRGAP1-201ENST00000355086 INTS3Q68E01 1043 aaKnown RBP6.96□□□□□ -1.3
SRGAP1-201ENST00000355086 TXLNAP40222 546 aa6.96□□□□□ -1.3
SRGAP1-201ENST00000355086 FILIP1LQ4L180 1135 aa6.96□□□□□ -1.3
SRGAP1-201ENST00000355086 WASHC2AQ641Q2 1341 aa6.95□□□□□ -1.3
SRGAP1-201ENST00000355086 SDF4Q9BRK5 362 aa6.95□□□□□ -1.3
SRGAP1-201ENST00000355086 COG6Q9Y2V7 657 aa6.95□□□□□ -1.3
SRGAP1-201ENST00000355086 SART3Q15020 963 aaKnown RBP6.95□□□□□ -1.3
SRGAP1-201ENST00000355086 DDX19BQ9UMR2 479 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms