RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 HSCBQ8IWL3 235 aa22.92■■□□□ 1.26
CTSB-202ENST00000353047 TCOF1Q13428 1488 aaKnown RBP22.92■■□□□ 1.26
CTSB-202ENST00000353047 MTHFSP49914 203 aa22.92■■□□□ 1.26
CTSB-202ENST00000353047 GOLGA6L3A6NEY3 463 aa22.91■■□□□ 1.26
CTSB-202ENST00000353047 LRPPRCP42704 1394 aaKnown RBP22.91■■□□□ 1.26
CTSB-202ENST00000353047 LNPKQ9C0E8 428 aa22.9■■□□□ 1.26
CTSB-202ENST00000353047 CGNL1Q0VF96 1302 aa22.89■■□□□ 1.26
CTSB-202ENST00000353047 FOXD4L5Q5VV16 416 aaPredicted RBP22.88■■□□□ 1.25
CTSB-202ENST00000353047 FOXD4L4Q8WXT5 416 aaPredicted RBP22.88■■□□□ 1.25
CTSB-202ENST00000353047 PNNQ9H307 717 aaKnown RBP22.87■■□□□ 1.25
CTSB-202ENST00000353047 PMFBP1Q8TBY8 1022 aa22.87■■□□□ 1.25
CTSB-202ENST00000353047 PARD3Q8TEW0 1356 aa22.87■■□□□ 1.25
CTSB-202ENST00000353047 LAMC3Q9Y6N6 1575 aa22.86■■□□□ 1.25
CTSB-202ENST00000353047 GGNBP2Q9H3C7 697 aa22.85■■□□□ 1.25
CTSB-202ENST00000353047 WWC1Q8IX03 1113 aa22.85■■□□□ 1.25
CTSB-202ENST00000353047 C1orf115Q9H7X2 142 aa22.84■■□□□ 1.25
CTSB-202ENST00000353047 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.84■■□□□ 1.25
CTSB-202ENST00000353047 ANP32BQ92688 251 aaKnown RBP22.84■■□□□ 1.25
CTSB-202ENST00000353047 AMER1Q5JTC6 1135 aaPredicted RBP22.83■■□□□ 1.24
CTSB-202ENST00000353047 L1TD1Q5T7N2 865 aaKnown RBP22.83■■□□□ 1.24
CTSB-202ENST00000353047 CABP2Q9NPB3 220 aa22.82■■□□□ 1.24
CTSB-202ENST00000353047 PCDHB15Q9Y5E8 787 aa22.82■■□□□ 1.24
CTSB-202ENST00000353047 RLBP1P12271 317 aa22.81■■□□□ 1.24
CTSB-202ENST00000353047 C22orf23Q9BZE7 217 aa22.8■■□□□ 1.24
CTSB-202ENST00000353047 BCORL1Q5H9F3 1711 aa22.8■■□□□ 1.24
CTSB-202ENST00000353047 KIAA0586Q9BVV6 1533 aa22.8■■□□□ 1.24
CTSB-202ENST00000353047 FOXD4L6Q3SYB3 417 aaPredicted RBP22.8■■□□□ 1.24
CTSB-202ENST00000353047 FOXD4L3Q6VB84 417 aaPredicted RBP22.8■■□□□ 1.24
CTSB-202ENST00000353047 ANKRD45Q5TZF3 282 aa22.8■■□□□ 1.24
CTSB-202ENST00000353047 RSPH4AQ5TD94 716 aa22.79■■□□□ 1.24
CTSB-202ENST00000353047 RALGAPBQ86X10 1494 aa22.79■■□□□ 1.24
CTSB-202ENST00000353047 EXOSC9Q06265 439 aaKnown RBP22.79■■□□□ 1.24
CTSB-202ENST00000353047 PANK2Q9BZ23 570 aa22.79■■□□□ 1.24
CTSB-202ENST00000353047 ZKSCAN2Q63HK3 967 aa22.79■■□□□ 1.24
CTSB-202ENST00000353047 NOL8Q76FK4 1167 aaKnown RBP22.79■■□□□ 1.24
CTSB-202ENST00000353047 MYH16Q9H6N6 1097 aa22.79■■□□□ 1.24
CTSB-202ENST00000353047 DZIP1LQ8IYY4 767 aaKnown RBP22.78■■□□□ 1.24
CTSB-202ENST00000353047 PLEKHH2Q8IVE3 1493 aa22.78■■□□□ 1.24
CTSB-202ENST00000353047 TBC1D2Q9BYX2 928 aa22.77■■□□□ 1.23
CTSB-202ENST00000353047 FBLN1P23142 703 aa22.76■■□□□ 1.23
CTSB-202ENST00000353047 RUNDC1Q96C34 613 aa22.76■■□□□ 1.23
CTSB-202ENST00000353047 WDR62O43379 1518 aa22.76■■□□□ 1.23
CTSB-202ENST00000353047 WASHC2CQ9Y4E1 1318 aa22.75■■□□□ 1.23
CTSB-202ENST00000353047 MINK1Q8N4C8 1332 aaPredicted RBP22.75■■□□□ 1.23
CTSB-202ENST00000353047 SAMD9Q5K651 1589 aa22.74■■□□□ 1.23
CTSB-202ENST00000353047 NUTM2FA1L443 756 aa22.74■■□□□ 1.23
CTSB-202ENST00000353047 KDM2BQ8NHM5 1336 aa22.74■■□□□ 1.23
CTSB-202ENST00000353047 ADGRF5Q8IZF2 1346 aa22.73■■□□□ 1.23
CTSB-202ENST00000353047 HMOX1P09601 288 aa22.73■■□□□ 1.23
CTSB-202ENST00000353047 ARHGAP5Q13017 1502 aa22.73■■□□□ 1.23
CTSB-202ENST00000353047 PRAG1Q86YV5 1406 aa22.73■■□□□ 1.23
CTSB-202ENST00000353047 TRAK2O60296 914 aa22.72■■□□□ 1.23
CTSB-202ENST00000353047 RARSP54136 660 aaKnown RBP22.72■■□□□ 1.23
CTSB-202ENST00000353047 KANK1Q14678 1352 aa22.71■■□□□ 1.23
CTSB-202ENST00000353047 MAGI1Q96QZ7 1491 aaPredicted RBP22.71■■□□□ 1.23
CTSB-202ENST00000353047 RIPK4P57078 832 aa22.71■■□□□ 1.23
CTSB-202ENST00000353047 CARD14Q9BXL6 1004 aa22.71■■□□□ 1.23
CTSB-202ENST00000353047 THUMPD2Q9BTF0 503 aaKnown RBP22.71■■□□□ 1.23
CTSB-202ENST00000353047 PDE3AQ14432 1141 aa22.7■■□□□ 1.22
CTSB-202ENST00000353047 EIF3AQ14152 1382 aaKnown RBP22.7■■□□□ 1.22
CTSB-202ENST00000353047 VSIG10Q8N0Z9 540 aa22.69■■□□□ 1.22
CTSB-202ENST00000353047 NPM1P06748 294 aaKnown RBP eCLIP22.69■■□□□ 1.22
CTSB-202ENST00000353047 NOB1Q9ULX3 412 aaKnown RBP22.68■■□□□ 1.22
CTSB-202ENST00000353047 MLECQ14165 292 aa22.67■■□□□ 1.22
CTSB-202ENST00000353047 LRRIQ1Q96JM4 1722 aa22.67■■□□□ 1.22
CTSB-202ENST00000353047 GOLGA6L22H0YM25 854 aa22.67■■□□□ 1.22
CTSB-202ENST00000353047 PLCB2Q00722 1185 aa22.67■■□□□ 1.22
CTSB-202ENST00000353047 GCC2Q8IWJ2 1684 aa22.67■■□□□ 1.22
CTSB-202ENST00000353047 GRIN2AQ12879 1464 aa22.67■■□□□ 1.22
CTSB-202ENST00000353047 GLIPR1L2Q4G1C9 344 aa22.66■■□□□ 1.22
CTSB-202ENST00000353047 RSPH6AQ9H0K4 717 aa22.66■■□□□ 1.22
CTSB-202ENST00000353047 DISP1Q96F81 1524 aa22.66■■□□□ 1.22
CTSB-202ENST00000353047 DNMT1P26358 1616 aaKnown RBP22.65■■□□□ 1.22
CTSB-202ENST00000353047 KIF14Q15058 1648 aa22.65■■□□□ 1.22
CTSB-202ENST00000353047 CHMP5Q9NZZ3 219 aa22.65■■□□□ 1.22
CTSB-202ENST00000353047 MCM4P33991 863 aa22.64■■□□□ 1.22
CTSB-202ENST00000353047 MRC2Q9UBG0 1479 aa22.63■■□□□ 1.21
CTSB-202ENST00000353047 ATP10BO94823 1461 aa22.63■■□□□ 1.21
CTSB-202ENST00000353047 NKTRP30414 1462 aaKnown RBP22.62■■□□□ 1.21
CTSB-202ENST00000353047 MPNDQ8N594 471 aa22.62■■□□□ 1.21
CTSB-202ENST00000353047 SSH1Q8WYL5 1049 aa22.61■■□□□ 1.21
CTSB-202ENST00000353047 RRAGDQ9NQL2 400 aaPredicted RBP22.61■■□□□ 1.21
CTSB-202ENST00000353047 DDX49Q9Y6V7 483 aaKnown RBP22.61■■□□□ 1.21
CTSB-202ENST00000353047 TMEM57Q8N5G2 664 aa22.6■■□□□ 1.21
CTSB-202ENST00000353047 KDM5CP41229 1560 aa22.6■■□□□ 1.21
CTSB-202ENST00000353047 MVPQ14764 893 aaKnown RBP22.6■■□□□ 1.21
CTSB-202ENST00000353047 FAM43AQ8N2R8 423 aa22.59■■□□□ 1.21
CTSB-202ENST00000353047 RAPGEF6Q8TEU7 1601 aa22.59■■□□□ 1.21
CTSB-202ENST00000353047 IPO8O15397 1037 aaKnown RBP22.59■■□□□ 1.21
CTSB-202ENST00000353047 GBP4Q96PP9 640 aa22.58■■□□□ 1.21
CTSB-202ENST00000353047 NSD3Q9BZ95 1437 aa22.58■■□□□ 1.21
CTSB-202ENST00000353047 SLC4A10Q6U841 1118 aa22.58■■□□□ 1.21
CTSB-202ENST00000353047 A2MP01023 1474 aa22.58■■□□□ 1.21
CTSB-202ENST00000353047 CCDC141Q6ZP82 1450 aa22.58■■□□□ 1.21
CTSB-202ENST00000353047 XRCC6P12956 609 aaKnown RBP eCLIP22.58■■□□□ 1.28e-11■■□□□ 11.5
CTSB-202ENST00000353047 SYNJ2O15056 1496 aa22.58■■□□□ 1.2
CTSB-202ENST00000353047 HSP90AA2PQ14568 343 aaPredicted RBP22.57■■□□□ 1.2
CTSB-202ENST00000353047 PTMAP06454 111 aaKnown RBP22.57■■□□□ 1.2
CTSB-202ENST00000353047 UHRF1BP1Q6BDS2 1440 aa22.57■■□□□ 1.2
CTSB-202ENST00000353047 RBM42Q9BTD8 480 aaKnown RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms