RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 NRXN1Q9ULB1 1477 aa25.53■■□□□ 1.68
TRIM41-202ENST00000351937 CHGAP10645 457 aaKnown RBP25.53■■□□□ 1.68
TRIM41-202ENST00000351937 TESK2Q96S53 571 aa25.52■■□□□ 1.68
TRIM41-202ENST00000351937 PRKRIP1Q9H875 184 aaPredicted RBP25.52■■□□□ 1.68
TRIM41-202ENST00000351937 ADGRF5Q8IZF2 1346 aa25.51■■□□□ 1.67
TRIM41-202ENST00000351937 IQGAP1P46940 1657 aa25.51■■□□□ 1.67
TRIM41-202ENST00000351937 SCAF11Q99590 1463 aaKnown RBP25.5■■□□□ 1.67
TRIM41-202ENST00000351937 SLC52A1Q9NWF4 448 aa25.5■■□□□ 1.67
TRIM41-202ENST00000351937 PREX1Q8TCU6 1659 aa25.47■■□□□ 1.67
TRIM41-202ENST00000351937 PPLO60437 1756 aa25.47■■□□□ 1.67
TRIM41-202ENST00000351937 TMF1P82094 1093 aa25.45■■□□□ 1.67
TRIM41-202ENST00000351937 CFAP70Q5T0N1 1121 aa25.45■■□□□ 1.66
TRIM41-202ENST00000351937 IDI1Q13907 227 aa25.44■■□□□ 1.66
TRIM41-202ENST00000351937 EIF3AQ14152 1382 aaKnown RBP25.44■■□□□ 1.66
TRIM41-202ENST00000351937 DISP3Q9P2K9 1392 aa25.42■■□□□ 1.66
TRIM41-202ENST00000351937 PIK3C2GO75747 1445 aa25.42■■□□□ 1.66
TRIM41-202ENST00000351937 ERVK-7P63135 1459 aa25.4■■□□□ 1.66
TRIM41-202ENST00000351937 SETBP1Q9Y6X0 1596 aa25.39■■□□□ 1.66
TRIM41-202ENST00000351937 CLTCQ00610 1675 aaKnown RBP25.39■■□□□ 1.65
TRIM41-202ENST00000351937 VGFO15240 615 aaPredicted RBP25.39■■□□□ 1.65
TRIM41-202ENST00000351937 C14orf93Q9H972 538 aaKnown RBP25.38■■□□□ 1.65
TRIM41-202ENST00000351937 NEXMIFQ5QGS0 1516 aa25.37■■□□□ 1.65
TRIM41-202ENST00000351937 FBXO31Q5XUX0 539 aaPredicted RBP25.37■■□□□ 1.65
TRIM41-202ENST00000351937 SLC24A1O60721 1099 aa25.36■■□□□ 1.65
TRIM41-202ENST00000351937 MLECQ14165 292 aa25.35■■□□□ 1.65
TRIM41-202ENST00000351937 ZFYVE9O95405 1425 aa25.34■■□□□ 1.65
TRIM41-202ENST00000351937 TMEM131LA2VDJ0 1609 aa25.34■■□□□ 1.65
TRIM41-202ENST00000351937 CDCA8Q53HL2 280 aa25.34■■□□□ 1.65
TRIM41-202ENST00000351937 KTN1Q86UP2 1357 aaKnown RBP25.32■■□□□ 1.64
TRIM41-202ENST00000351937 SPATA31D1Q6ZQQ2 1576 aa25.32■■□□□ 1.64
TRIM41-202ENST00000351937 ESF1Q9H501 851 aaKnown RBP25.3■■□□□ 1.64
TRIM41-202ENST00000351937 CCDC184Q52MB2 194 aa25.3■■□□□ 1.64
TRIM41-202ENST00000351937 ADGRB1O14514 1584 aa25.29■■□□□ 1.64
TRIM41-202ENST00000351937 MRS2Q9HD23 443 aa25.29■■□□□ 1.64
TRIM41-202ENST00000351937 MYO3AQ8NEV4 1616 aa25.27■■□□□ 1.64
TRIM41-202ENST00000351937 PER1O15534 1290 aaPredicted RBP25.27■■□□□ 1.64
TRIM41-202ENST00000351937 ZMYM3Q14202 1370 aa25.26■■□□□ 1.63
TRIM41-202ENST00000351937 SBNO2Q9Y2G9 1366 aa25.26■■□□□ 1.63
TRIM41-202ENST00000351937 MYO5BQ9ULV0 1848 aa25.26■■□□□ 1.63
TRIM41-202ENST00000351937 RALBP1Q15311 655 aa25.26■■□□□ 1.63
TRIM41-202ENST00000351937 TRHP20396 242 aaPredicted RBP25.25■■□□□ 1.63
TRIM41-202ENST00000351937 NUTM2DQ5VT03 806 aaPredicted RBP25.25■■□□□ 1.63
TRIM41-202ENST00000351937 PANK3Q9H999 370 aa25.24■■□□□ 1.63
TRIM41-202ENST00000351937 STAG3Q9UJ98 1225 aa25.23■■□□□ 1.63
TRIM41-202ENST00000351937 MYT1Q01538 1121 aa25.22■■□□□ 1.63
TRIM41-202ENST00000351937 CENPJQ9HC77 1338 aaPredicted RBP25.22■■□□□ 1.63
TRIM41-202ENST00000351937 CNGB1Q14028 1251 aaPredicted RBP25.21■■□□□ 1.63
TRIM41-202ENST00000351937 TMEM132EQ6IEE7 984 aa25.2■■□□□ 1.63
TRIM41-202ENST00000351937 TRAK1Q9UPV9 953 aa25.2■■□□□ 1.62
TRIM41-202ENST00000351937 KDM5AP29375 1690 aaKnown RBP25.19■■□□□ 1.62
TRIM41-202ENST00000351937 A2ML1A8K2U0 1454 aa25.19■■□□□ 1.62
TRIM41-202ENST00000351937 MYBBP1AQ9BQG0 1328 aaKnown RBP25.18■■□□□ 1.62
TRIM41-202ENST00000351937 PARD3Q8TEW0 1356 aa25.17■■□□□ 1.62
TRIM41-202ENST00000351937 FAM9BQ8IZU0 186 aa25.16■■□□□ 1.62
TRIM41-202ENST00000351937 HNRNPUQ00839 825 aaKnown RBP eCLIP25.16■■□□□ 1.62
TRIM41-202ENST00000351937 BRD4O60885 1362 aaPredicted RBP25.13■■□□□ 1.61
TRIM41-202ENST00000351937 MYOM1P52179 1685 aa25.12■■□□□ 1.61
TRIM41-202ENST00000351937 QRICH2Q9H0J4 1663 aa25.12■■□□□ 1.61
TRIM41-202ENST00000351937 TMC1Q8TDI8 760 aa25.12■■□□□ 1.61
TRIM41-202ENST00000351937 TNRQ92752 1358 aa25.11■■□□□ 1.61
TRIM41-202ENST00000351937 RIMS2Q9UQ26 1411 aa25.1■■□□□ 1.61
TRIM41-202ENST00000351937 KNSTRNQ9Y448 316 aa25.1■■□□□ 1.61
TRIM41-202ENST00000351937 ARHGEF28Q8N1W1 1705 aaKnown RBP25.09■■□□□ 1.61
TRIM41-202ENST00000351937 ASXL1Q8IXJ9 1541 aa25.09■■□□□ 1.61
TRIM41-202ENST00000351937 NLRP13Q86W25 1043 aa25.09■■□□□ 1.61
TRIM41-202ENST00000351937 ALKQ9UM73 1620 aa25.08■■□□□ 1.6
TRIM41-202ENST00000351937 CC2D1BQ5T0F9 858 aaKnown RBP25.07■■□□□ 1.6
TRIM41-202ENST00000351937 PNISRQ8TF01 805 aaKnown RBP25.07■■□□□ 1.6
TRIM41-202ENST00000351937 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.06■■□□□ 1.6
TRIM41-202ENST00000351937 DNAJC5Q9H3Z4 198 aa25.06■■□□□ 1.6
TRIM41-202ENST00000351937 PUS7Q96PZ0 661 aaKnown RBP25.05■■□□□ 1.6
TRIM41-202ENST00000351937 YTHDC2Q9H6S0 1430 aaKnown RBP25.04■■□□□ 1.6
TRIM41-202ENST00000351937 NPC1L1Q9UHC9 1359 aa25.03■■□□□ 1.6
TRIM41-202ENST00000351937 HDGFP51858 240 aaKnown RBP25.03■■□□□ 1.6
TRIM41-202ENST00000351937 AMER1Q5JTC6 1135 aaPredicted RBP25.03■■□□□ 1.6
TRIM41-202ENST00000351937 EVC2Q86UK5 1308 aa25.01■■□□□ 1.59
TRIM41-202ENST00000351937 STK26Q9P289 416 aa25.01■■□□□ 1.59
TRIM41-202ENST00000351937 SENP3Q9H4L4 574 aaPredicted RBP25■■□□□ 1.59
TRIM41-202ENST00000351937 PTPRMP28827 1452 aa25■■□□□ 1.59
TRIM41-202ENST00000351937 ZBED9Q6R2W3 1325 aa25■■□□□ 1.59
TRIM41-202ENST00000351937 NLRP1Q9C000 1473 aa24.99■■□□□ 1.59
TRIM41-202ENST00000351937 LRPPRCP42704 1394 aaKnown RBP24.98■■□□□ 1.59
TRIM41-202ENST00000351937 SUPT16HQ9Y5B9 1047 aaKnown RBP24.98■■□□□ 1.59
TRIM41-202ENST00000351937 UBR1Q8IWV7 1749 aa24.97■■□□□ 1.59
TRIM41-202ENST00000351937 TULP4Q9NRJ4 1543 aa24.96■■□□□ 1.59
TRIM41-202ENST00000351937 TMEM2Q9UHN6 1383 aa24.95■■□□□ 1.59
TRIM41-202ENST00000351937 FER1L4A9Z1Z3 1794 aa24.95■■□□□ 1.58
TRIM41-202ENST00000351937 SETD1AO15047 1707 aaKnown RBP24.94■■□□□ 1.58
TRIM41-202ENST00000351937 CARD14Q9BXL6 1004 aa24.94■■□□□ 1.58
TRIM41-202ENST00000351937 C3P01024 1663 aa24.94■■□□□ 1.58
TRIM41-202ENST00000351937 CEBPAP49715 358 aaPredicted RBP24.94■■□□□ 1.58
TRIM41-202ENST00000351937 PRAM1Q96QH2 718 aa24.94■■□□□ 1.58
TRIM41-202ENST00000351937 POGKQ9P215 609 aa24.93■■□□□ 1.58
TRIM41-202ENST00000351937 DLC1Q96QB1 1528 aa24.93■■□□□ 1.58
TRIM41-202ENST00000351937 NRXN3Q9Y4C0 1643 aa24.92■■□□□ 1.58
TRIM41-202ENST00000351937 SAFB2Q14151 953 aaKnown RBP eCLIP24.91■■□□□ 1.58
TRIM41-202ENST00000351937 SLC12A5Q9H2X9 1139 aa24.91■■□□□ 1.58
TRIM41-202ENST00000351937 ABCC11Q96J66 1382 aa24.9■■□□□ 1.58
TRIM41-202ENST00000351937 PPP2R1AP30153 589 aa24.89■■□□□ 1.58
TRIM41-202ENST00000351937 NINLQ9Y2I6 1382 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 223.9 ms