RNA–Protein interactions for RNA: ENST00000350061.9

CACNA1D-202, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1D, Length 7,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-202ENST00000350061 CALD1Q05682 793 aaKnown RBP11.47□□□□□ -0.57
CACNA1D-202ENST00000350061 WDR7Q9Y4E6 1490 aa11.47□□□□□ -0.57
CACNA1D-202ENST00000350061 TRAK2O60296 914 aa11.46□□□□□ -0.57
CACNA1D-202ENST00000350061 RBM25P49756 843 aaKnown RBP11.46□□□□□ -0.57
CACNA1D-202ENST00000350061 ERBB4Q15303 1308 aa11.46□□□□□ -0.58
CACNA1D-202ENST00000350061 GAS2L3Q86XJ1 694 aa11.46□□□□□ -0.58
CACNA1D-202ENST00000350061 ABCC10Q5T3U5 1492 aa11.46□□□□□ -0.58
CACNA1D-202ENST00000350061 NLRP1Q9C000 1473 aa11.46□□□□□ -0.58
CACNA1D-202ENST00000350061 SCAPERQ9BY12 1400 aa11.46□□□□□ -0.58
CACNA1D-202ENST00000350061 PCDHB15Q9Y5E8 787 aa11.46□□□□□ -0.58
CACNA1D-202ENST00000350061 DNMBPQ6XZF7 1577 aa11.45□□□□□ -0.58
CACNA1D-202ENST00000350061 TPM2P07951 284 aa11.45□□□□□ -0.58
CACNA1D-202ENST00000350061 CAMSAP2Q08AD1 1489 aa11.45□□□□□ -0.58
CACNA1D-202ENST00000350061 SHANK2Q9UPX8 1470 aa11.45□□□□□ -0.58
CACNA1D-202ENST00000350061 POLR3AO14802 1390 aaPredicted RBP11.45□□□□□ -0.58
CACNA1D-202ENST00000350061 RTEL1-TNFRSF6BF6WH68 1400 aa11.45□□□□□ -0.58
CACNA1D-202ENST00000350061 SNX21Q969T3 373 aa11.44□□□□□ -0.58
CACNA1D-202ENST00000350061 DMRT2Q9Y5R5 561 aa11.44□□□□□ -0.58
CACNA1D-202ENST00000350061 KNSTRNQ9Y448 316 aa11.44□□□□□ -0.58
CACNA1D-202ENST00000350061 GRPEL1Q9HAV7 217 aa11.43□□□□□ -0.58
CACNA1D-202ENST00000350061 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
CACNA1D-202ENST00000350061 HSP90AA1P07900 732 aaKnown RBP11.43□□□□□ -0.58
CACNA1D-202ENST00000350061 RIPK4P57078 832 aa11.43□□□□□ -0.58
CACNA1D-202ENST00000350061 CT47B1P0C2W7 299 aaPredicted RBP11.42□□□□□ -0.58
CACNA1D-202ENST00000350061 RWDD1Q9H446 243 aaPredicted RBP11.42□□□□□ -0.58
CACNA1D-202ENST00000350061 DDX11L8A8MPP1 907 aa11.42□□□□□ -0.58
CACNA1D-202ENST00000350061 COG6Q9Y2V7 657 aa11.42□□□□□ -0.58
CACNA1D-202ENST00000350061 RARSP54136 660 aaKnown RBP11.42□□□□□ -0.58
CACNA1D-202ENST00000350061 KLHL40Q2TBA0 621 aa11.42□□□□□ -0.58
CACNA1D-202ENST00000350061 PRG4Q92954 1404 aaPredicted RBP11.42□□□□□ -0.58
CACNA1D-202ENST00000350061 STAG3Q9UJ98 1225 aa11.41□□□□□ -0.58
CACNA1D-202ENST00000350061 BCAR3O75815 825 aa11.41□□□□□ -0.58
CACNA1D-202ENST00000350061 WDR43Q15061 677 aaKnown RBP eCLIP11.41□□□□□ -0.58
CACNA1D-202ENST00000350061 SKOR2Q2VWA4 1001 aaPredicted RBP11.41□□□□□ -0.58
CACNA1D-202ENST00000350061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.41□□□□□ -0.58
CACNA1D-202ENST00000350061 ERCC6Q03468 1493 aa11.4□□□□□ -0.58
CACNA1D-202ENST00000350061 PMFBP1Q8TBY8 1022 aa11.4□□□□□ -0.58
CACNA1D-202ENST00000350061 CHGAP10645 457 aaKnown RBP11.4□□□□□ -0.58
CACNA1D-202ENST00000350061 HDAC1Q13547 482 aaPredicted RBP11.4□□□□□ -0.58
CACNA1D-202ENST00000350061 MTERF4Q7Z6M4 381 aaKnown RBP11.39□□□□□ -0.59
CACNA1D-202ENST00000350061 PRDM4Q9UKN5 801 aa11.39□□□□□ -0.59
CACNA1D-202ENST00000350061 CC2D2AQ9P2K1 1620 aa11.39□□□□□ -0.59
CACNA1D-202ENST00000350061 DISP3Q9P2K9 1392 aa11.39□□□□□ -0.59
CACNA1D-202ENST00000350061 PDZRN3Q9UPQ7 1066 aa11.39□□□□□ -0.59
CACNA1D-202ENST00000350061 KDM2AQ9Y2K7 1162 aa11.39□□□□□ -0.59
CACNA1D-202ENST00000350061 MCM5P33992 734 aa11.39□□□□□ -0.59
CACNA1D-202ENST00000350061 NKTRP30414 1462 aaKnown RBP11.39□□□□□ -0.59
CACNA1D-202ENST00000350061 ZNF500O60304 480 aaPredicted RBP11.38□□□□□ -0.59
CACNA1D-202ENST00000350061 WWC1Q8IX03 1113 aa11.38□□□□□ -0.59
CACNA1D-202ENST00000350061 C22orf23Q9BZE7 217 aa11.38□□□□□ -0.59
CACNA1D-202ENST00000350061 RLBP1P12271 317 aa11.38□□□□□ -0.59
CACNA1D-202ENST00000350061 KDM6BO15054 1643 aa11.37□□□□□ -0.59
CACNA1D-202ENST00000350061 KDM5DQ9BY66 1539 aa11.37□□□□□ -0.59
CACNA1D-202ENST00000350061 CARMIL2Q6F5E8 1435 aa11.37□□□□□ -0.59
CACNA1D-202ENST00000350061 ARHGAP31Q2M1Z3 1444 aa11.36□□□□□ -0.59
CACNA1D-202ENST00000350061 WDR63Q8IWG1 891 aa11.36□□□□□ -0.59
CACNA1D-202ENST00000350061 NAP1L5Q96NT1 182 aaPredicted RBP11.36□□□□□ -0.59
CACNA1D-202ENST00000350061 KIAA1211Q6ZU35 1233 aa11.36□□□□□ -0.59
CACNA1D-202ENST00000350061 PUS7Q96PZ0 661 aaKnown RBP11.36□□□□□ -0.59
CACNA1D-202ENST00000350061 KLHL34Q8N239 644 aa11.36□□□□□ -0.59
CACNA1D-202ENST00000350061 ERBINQ96RT1 1412 aa11.36□□□□□ -0.59
CACNA1D-202ENST00000350061 BMP2KLQ5H9B9 411 aa11.35□□□□□ -0.59
CACNA1D-202ENST00000350061 ZNF428Q96B54 188 aa11.35□□□□□ -0.59
CACNA1D-202ENST00000350061 MAGI2Q86UL8 1455 aa11.35□□□□□ -0.59
CACNA1D-202ENST00000350061 C9orf84Q5VXU9 1444 aa11.35□□□□□ -0.59
CACNA1D-202ENST00000350061 TCP11L2Q8N4U5 519 aa11.35□□□□□ -0.59
CACNA1D-202ENST00000350061 ZNF445P59923 1031 aa11.35□□□□□ -0.59
CACNA1D-202ENST00000350061 NOL7Q9UMY1 257 aaKnown RBP11.35□□□□□ -0.59
CACNA1D-202ENST00000350061 CDK13Q14004 1512 aaKnown RBP11.35□□□□□ -0.59
CACNA1D-202ENST00000350061 URB2Q14146 1524 aaKnown RBP11.35□□□□□ -0.59
CACNA1D-202ENST00000350061 RAB3GAP1Q15042 981 aa11.35□□□□□ -0.59
CACNA1D-202ENST00000350061 KDM5CP41229 1560 aa11.34□□□□□ -0.59
CACNA1D-202ENST00000350061 CYP2E1P05181 493 aaPredicted RBP11.34□□□□□ -0.59
CACNA1D-202ENST00000350061 PTMSP20962 102 aa11.34□□□□□ -0.59
CACNA1D-202ENST00000350061 CLASP1Q7Z460 1538 aa11.34□□□□□ -0.59
CACNA1D-202ENST00000350061 CC2D1BQ5T0F9 858 aaKnown RBP11.34□□□□□ -0.59
CACNA1D-202ENST00000350061 ABCC2Q92887 1545 aa11.34□□□□□ -0.59
CACNA1D-202ENST00000350061 PANK1Q8TE04 598 aa11.33□□□□□ -0.6
CACNA1D-202ENST00000350061 GBP4Q96PP9 640 aa11.33□□□□□ -0.6
CACNA1D-202ENST00000350061 DISP1Q96F81 1524 aa11.33□□□□□ -0.6
CACNA1D-202ENST00000350061 A2MP01023 1474 aa11.32□□□□□ -0.6
CACNA1D-202ENST00000350061 ZKSCAN5Q9Y2L8 839 aa11.32□□□□□ -0.6
CACNA1D-202ENST00000350061 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.32□□□□□ -0.6
CACNA1D-202ENST00000350061 TNPO1Q92973 898 aaKnown RBP11.32□□□□□ -0.6
CACNA1D-202ENST00000350061 CUL7Q14999 1698 aa11.32□□□□□ -0.6
CACNA1D-202ENST00000350061 WDR62O43379 1518 aa11.32□□□□□ -0.6
CACNA1D-202ENST00000350061 SYNJ2O15056 1496 aa11.31□□□□□ -0.6
CACNA1D-202ENST00000350061 MVPQ14764 893 aaKnown RBP11.31□□□□□ -0.6
CACNA1D-202ENST00000350061 KIF16BQ96L93 1317 aa11.31□□□□□ -0.6
CACNA1D-202ENST00000350061 CCDC173Q0VFZ6 552 aa11.31□□□□□ -0.6
CACNA1D-202ENST00000350061 CCDC141Q6ZP82 1450 aa11.31□□□□□ -0.6
CACNA1D-202ENST00000350061 SUPT6HQ7KZ85 1726 aaKnown RBP11.31□□□□□ -0.6
CACNA1D-202ENST00000350061 RGL3Q3MIN7 710 aa11.3□□□□□ -0.6
CACNA1D-202ENST00000350061 ZKSCAN2Q63HK3 967 aa11.3□□□□□ -0.6
CACNA1D-202ENST00000350061 DNMT1P26358 1616 aaKnown RBP11.29□□□□□ -0.6
CACNA1D-202ENST00000350061 TRIM44Q96DX7 344 aaPredicted RBP11.29□□□□□ -0.6
CACNA1D-202ENST00000350061 KIF2CQ99661 725 aa11.29□□□□□ -0.6
CACNA1D-202ENST00000350061 CFAP53Q96M91 514 aa11.29□□□□□ -0.6
CACNA1D-202ENST00000350061 DZIP1LQ8IYY4 767 aaKnown RBP11.28□□□□□ -0.6
CACNA1D-202ENST00000350061 GCC2Q8IWJ2 1684 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms