RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 NRXN1Q9ULB1 1477 aa26.14■■□□□ 1.77
PTN-201ENST00000348225 NBPF1Q3BBV0 1214 aa26.13■■□□□ 1.77
PTN-201ENST00000348225 TMEM131LA2VDJ0 1609 aa26.13■■□□□ 1.77
PTN-201ENST00000348225 WASHC2AQ641Q2 1341 aa26.12■■□□□ 1.77
PTN-201ENST00000348225 CCDC7Q96M83 1385 aa26.1■■□□□ 1.77
PTN-201ENST00000348225 NEXMIFQ5QGS0 1516 aa26.1■■□□□ 1.77
PTN-201ENST00000348225 ADGRF5Q8IZF2 1346 aa26.09■■□□□ 1.77
PTN-201ENST00000348225 MYO5BQ9ULV0 1848 aa26.08■■□□□ 1.77
PTN-201ENST00000348225 MIER1Q8N108 512 aa26.08■■□□□ 1.77
PTN-201ENST00000348225 FER1L4A9Z1Z3 1794 aa26.07■■□□□ 1.76
PTN-201ENST00000348225 IQGAP1P46940 1657 aa26.06■■□□□ 1.76
PTN-201ENST00000348225 ST20-MTHFSA0A0A6YYL1 179 aa26.05■■□□□ 1.76
PTN-201ENST00000348225 PIK3C2GO75747 1445 aa26.05■■□□□ 1.76
PTN-201ENST00000348225 VGFO15240 615 aaPredicted RBP26.03■■□□□ 1.76
PTN-201ENST00000348225 SCAF11Q99590 1463 aaKnown RBP26.03■■□□□ 1.76
PTN-201ENST00000348225 C11orf95C9JLR9 678 aaPredicted RBP26.03■■□□□ 1.76
PTN-201ENST00000348225 STAG3Q9UJ98 1225 aa26.03■■□□□ 1.76
PTN-201ENST00000348225 KIF7Q2M1P5 1343 aa26.03■■□□□ 1.76
PTN-201ENST00000348225 ZFYVE9O95405 1425 aa26.02■■□□□ 1.76
PTN-201ENST00000348225 SETBP1Q9Y6X0 1596 aa26.02■■□□□ 1.76
PTN-201ENST00000348225 TNRQ92752 1358 aa26.01■■□□□ 1.75
PTN-201ENST00000348225 EIF3AQ14152 1382 aaKnown RBP25.99■■□□□ 1.75
PTN-201ENST00000348225 CFAP70Q5T0N1 1121 aa25.99■■□□□ 1.75
PTN-201ENST00000348225 A2ML1A8K2U0 1454 aa25.98■■□□□ 1.75
PTN-201ENST00000348225 C3P01024 1663 aa25.97■■□□□ 1.75
PTN-201ENST00000348225 KDM5AP29375 1690 aaKnown RBP25.97■■□□□ 1.75
PTN-201ENST00000348225 C14orf93Q9H972 538 aaKnown RBP25.95■■□□□ 1.74
PTN-201ENST00000348225 NLRP1Q9C000 1473 aa25.92■■□□□ 1.74
PTN-201ENST00000348225 ANP32CO43423 234 aa25.9■■□□□ 1.74
PTN-201ENST00000348225 NUTM2DQ5VT03 806 aaPredicted RBP25.9■■□□□ 1.74
PTN-201ENST00000348225 ADGRB1O14514 1584 aa25.9■■□□□ 1.74
PTN-201ENST00000348225 TESK2Q96S53 571 aa25.89■■□□□ 1.74
PTN-201ENST00000348225 RIMS2Q9UQ26 1411 aa25.88■■□□□ 1.73
PTN-201ENST00000348225 UBR1Q8IWV7 1749 aa25.88■■□□□ 1.73
PTN-201ENST00000348225 POLR3GLQ9BT43 218 aa25.88■■□□□ 1.73
PTN-201ENST00000348225 TMF1P82094 1093 aa25.87■■□□□ 1.73
PTN-201ENST00000348225 MYO3AQ8NEV4 1616 aa25.87■■□□□ 1.73
PTN-201ENST00000348225 SLC24A1O60721 1099 aa25.85■■□□□ 1.73
PTN-201ENST00000348225 RIMS1Q86UR5 1692 aaKnown RBP25.85■■□□□ 1.73
PTN-201ENST00000348225 CEBPAP49715 358 aaPredicted RBP25.85■■□□□ 1.73
PTN-201ENST00000348225 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.85■■□□□ 1.73
PTN-201ENST00000348225 ADAMTSL3P82987 1691 aa25.84■■□□□ 1.73
PTN-201ENST00000348225 HDGFP51858 240 aaKnown RBP25.83■■□□□ 1.73
PTN-201ENST00000348225 DISP3Q9P2K9 1392 aa25.81■■□□□ 1.72
PTN-201ENST00000348225 CDCA8Q53HL2 280 aa25.79■■□□□ 1.72
PTN-201ENST00000348225 ALKQ9UM73 1620 aa25.79■■□□□ 1.72
PTN-201ENST00000348225 TMEM2Q9UHN6 1383 aa25.78■■□□□ 1.72
PTN-201ENST00000348225 SBNO2Q9Y2G9 1366 aa25.78■■□□□ 1.72
PTN-201ENST00000348225 TMEM132EQ6IEE7 984 aa25.77■■□□□ 1.72
PTN-201ENST00000348225 ASXL1Q8IXJ9 1541 aa25.77■■□□□ 1.72
PTN-201ENST00000348225 CENPJQ9HC77 1338 aaPredicted RBP25.76■■□□□ 1.71
PTN-201ENST00000348225 TRAK1Q9UPV9 953 aa25.76■■□□□ 1.71
PTN-201ENST00000348225 ARHGEF28Q8N1W1 1705 aaKnown RBP25.75■■□□□ 1.71
PTN-201ENST00000348225 PLPPR3Q6T4P5 718 aa25.75■■□□□ 1.71
PTN-201ENST00000348225 QRICH2Q9H0J4 1663 aa25.75■■□□□ 1.71
PTN-201ENST00000348225 CCER2I3L3R5 266 aa25.74■■□□□ 1.71
PTN-201ENST00000348225 SETD1AO15047 1707 aaKnown RBP25.71■■□□□ 1.71
PTN-201ENST00000348225 NRXN3Q9Y4C0 1643 aa25.7■■□□□ 1.71
PTN-201ENST00000348225 SLIT1O75093 1534 aa25.7■■□□□ 1.7
PTN-201ENST00000348225 YTHDC2Q9H6S0 1430 aaKnown RBP25.69■■□□□ 1.7
PTN-201ENST00000348225 PTPRMP28827 1452 aa25.67■■□□□ 1.7
PTN-201ENST00000348225 ARHGAP23Q9P227 1491 aa25.67■■□□□ 1.7
PTN-201ENST00000348225 CEP170BQ9Y4F5 1589 aaPredicted RBP25.67■■□□□ 1.7
PTN-201ENST00000348225 THEMISQ8N1K5 641 aaPredicted RBP25.66■■□□□ 1.7
PTN-201ENST00000348225 SENP3Q9H4L4 574 aaPredicted RBP25.66■■□□□ 1.7
PTN-201ENST00000348225 PRKRIP1Q9H875 184 aaPredicted RBP25.65■■□□□ 1.7
PTN-201ENST00000348225 EID1Q9Y6B2 187 aa25.65■■□□□ 1.7
PTN-201ENST00000348225 PLEKHG1Q9ULL1 1385 aa25.64■■□□□ 1.69
PTN-201ENST00000348225 ZNF142P52746 1687 aaPredicted RBP25.63■■□□□ 1.69
PTN-201ENST00000348225 STK26Q9P289 416 aa25.63■■□□□ 1.69
PTN-201ENST00000348225 DLC1Q96QB1 1528 aa25.63■■□□□ 1.69
PTN-201ENST00000348225 LRPPRCP42704 1394 aaKnown RBP25.62■■□□□ 1.69
PTN-201ENST00000348225 MYOM1P52179 1685 aa25.62■■□□□ 1.69
PTN-201ENST00000348225 TXNDC2Q86VQ3 553 aa25.61■■□□□ 1.69
PTN-201ENST00000348225 BCANQ96GW7 911 aa25.6■■□□□ 1.69
PTN-201ENST00000348225 SETD1BQ9UPS6 1966 aaKnown RBP25.6■■□□□ 1.69
PTN-201ENST00000348225 YTHDC1Q96MU7 727 aaKnown RBP25.59■■□□□ 1.69
PTN-201ENST00000348225 KNDC1Q76NI1 1749 aa25.58■■□□□ 1.69
PTN-201ENST00000348225 LTKP29376 864 aa25.58■■□□□ 1.69
PTN-201ENST00000348225 KTN1Q86UP2 1357 aaKnown RBP25.57■■□□□ 1.68
PTN-201ENST00000348225 ABCC11Q96J66 1382 aa25.57■■□□□ 1.68
PTN-201ENST00000348225 EVC2Q86UK5 1308 aa25.56■■□□□ 1.68
PTN-201ENST00000348225 PANK3Q9H999 370 aa25.56■■□□□ 1.68
PTN-201ENST00000348225 POGKQ9P215 609 aa25.56■■□□□ 1.68
PTN-201ENST00000348225 ADAMTS13Q76LX8 1427 aa25.55■■□□□ 1.68
PTN-201ENST00000348225 PUS7Q96PZ0 661 aaKnown RBP25.55■■□□□ 1.68
PTN-201ENST00000348225 PRAM1Q96QH2 718 aa25.55■■□□□ 1.68
PTN-201ENST00000348225 METP08581 1390 aa25.54■■□□□ 1.68
PTN-201ENST00000348225 TULP4Q9NRJ4 1543 aa25.54■■□□□ 1.68
PTN-201ENST00000348225 CENPBP07199 599 aaPredicted RBP25.54■■□□□ 1.68
PTN-201ENST00000348225 DIP2AQ14689 1571 aa25.53■■□□□ 1.68
PTN-201ENST00000348225 PER1O15534 1290 aaPredicted RBP25.52■■□□□ 1.68
PTN-201ENST00000348225 TECPR2O15040 1411 aa25.51■■□□□ 1.67
PTN-201ENST00000348225 MED14O60244 1454 aa25.51■■□□□ 1.67
PTN-201ENST00000348225 CPS1P31327 1500 aa25.5■■□□□ 1.67
PTN-201ENST00000348225 SAFB2Q14151 953 aaKnown RBP eCLIP25.5■■□□□ 1.67
PTN-201ENST00000348225 RALBP1Q15311 655 aa25.49■■□□□ 1.67
PTN-201ENST00000348225 SIRT1Q96EB6 747 aa25.48■■□□□ 1.67
PTN-201ENST00000348225 FAM135BQ49AJ0 1406 aa25.48■■□□□ 1.67
PTN-201ENST00000348225 KNSTRNQ9Y448 316 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms