RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 SENP3Q9H4L4 574 aaPredicted RBP8.13□□□□□ -1.11
CLCN3-201ENST00000347613 DMRT2Q9Y5R5 561 aa8.13□□□□□ -1.11
CLCN3-201ENST00000347613 TRPM2O94759 1503 aa8.13□□□□□ -1.11
CLCN3-201ENST00000347613 KIF3BO15066 747 aa8.12□□□□□ -1.11
CLCN3-201ENST00000347613 CCDC136Q96JN2 1154 aa8.12□□□□□ -1.11
CLCN3-201ENST00000347613 ABCA9Q8IUA7 1624 aa8.12□□□□□ -1.11
CLCN3-201ENST00000347613 CARD14Q9BXL6 1004 aa8.12□□□□□ -1.11
CLCN3-201ENST00000347613 INO80Q9ULG1 1556 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-201ENST00000347613 RCAN3Q9UKA8 241 aa8.12□□□□□ -1.11
CLCN3-201ENST00000347613 FANCAO15360 1455 aa8.12□□□□□ -1.11
CLCN3-201ENST00000347613 VWDEQ8N2E2 1590 aa8.12□□□□□ -1.11
CLCN3-201ENST00000347613 BLMP54132 1417 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-201ENST00000347613 KIDINS220Q9ULH0 1771 aa8.12□□□□□ -1.11
CLCN3-201ENST00000347613 PPP2R1AP30153 589 aa8.11□□□□□ -1.11
CLCN3-201ENST00000347613 BCL11AQ9H165 835 aa8.11□□□□□ -1.11
CLCN3-201ENST00000347613 ATP7AQ04656 1500 aa8.11□□□□□ -1.11
CLCN3-201ENST00000347613 TMF1P82094 1093 aa8.1□□□□□ -1.11
CLCN3-201ENST00000347613 CCDC146Q8IYE0 955 aa8.1□□□□□ -1.11
CLCN3-201ENST00000347613 EIF2AK4Q9P2K8 1649 aaKnown RBP8.1□□□□□ -1.11
CLCN3-201ENST00000347613 ABCA6Q8N139 1617 aa8.1□□□□□ -1.11
CLCN3-201ENST00000347613 NUTM2DQ5VT03 806 aaPredicted RBP8.1□□□□□ -1.11
CLCN3-201ENST00000347613 PPRC1Q5VV67 1664 aaKnown RBP8.1□□□□□ -1.11
CLCN3-201ENST00000347613 TET3O43151 1660 aa8.09□□□□□ -1.11
CLCN3-201ENST00000347613 ASXL2Q76L83 1435 aa8.09□□□□□ -1.11
CLCN3-201ENST00000347613 OSCARQ8IYS5 282 aa8.09□□□□□ -1.11
CLCN3-201ENST00000347613 CRBNQ96SW2 442 aa8.09□□□□□ -1.11
CLCN3-201ENST00000347613 RTEL1-TNFRSF6BF6WH68 1400 aa8.08□□□□□ -1.12
CLCN3-201ENST00000347613 ERVK-7P63135 1459 aa8.08□□□□□ -1.12
CLCN3-201ENST00000347613 IFT172Q9UG01 1749 aa8.08□□□□□ -1.12
CLCN3-201ENST00000347613 ADGRL1O94910 1474 aa8.08□□□□□ -1.12
CLCN3-201ENST00000347613 TMEM132EQ6IEE7 984 aa8.08□□□□□ -1.12
CLCN3-201ENST00000347613 ZNF521Q96K83 1311 aa8.08□□□□□ -1.12
CLCN3-201ENST00000347613 FRMPD1Q5SYB0 1578 aa8.07□□□□□ -1.12
CLCN3-201ENST00000347613 ZMYM4Q5VZL5 1548 aa8.07□□□□□ -1.12
CLCN3-201ENST00000347613 DUSP27Q5VZP5 1158 aa8.07□□□□□ -1.12
CLCN3-201ENST00000347613 SCAF11Q99590 1463 aaKnown RBP8.07□□□□□ -1.12
CLCN3-201ENST00000347613 SIGLEC1Q9BZZ2 1709 aa8.07□□□□□ -1.12
CLCN3-201ENST00000347613 MYT1LQ9UL68 1186 aa8.07□□□□□ -1.12
CLCN3-201ENST00000347613 MAP3K4Q9Y6R4 1608 aa8.07□□□□□ -1.12
CLCN3-201ENST00000347613 SYNMO15061 1565 aa8.05□□□□□ -1.12
CLCN3-201ENST00000347613 ARAP3Q8WWN8 1544 aa8.05□□□□□ -1.12
CLCN3-201ENST00000347613 RAPGEF3O95398 923 aa8.05□□□□□ -1.12
CLCN3-201ENST00000347613 WASHC2CQ9Y4E1 1318 aa8.04□□□□□ -1.12
CLCN3-201ENST00000347613 KNSTRNQ9Y448 316 aa8.04□□□□□ -1.12
CLCN3-201ENST00000347613 NOS1P29475 1434 aa8.04□□□□□ -1.12
CLCN3-201ENST00000347613 EFCAB6Q5THR3 1501 aa8.04□□□□□ -1.12
CLCN3-201ENST00000347613 SLC12A5Q9H2X9 1139 aa8.04□□□□□ -1.12
CLCN3-201ENST00000347613 TRAK1Q9UPV9 953 aa8.04□□□□□ -1.12
CLCN3-201ENST00000347613 KIF1BO60333 1816 aa8.04□□□□□ -1.12
CLCN3-201ENST00000347613 ASXL1Q8IXJ9 1541 aa8.04□□□□□ -1.12
CLCN3-201ENST00000347613 BCAR3O75815 825 aa8.04□□□□□ -1.12
CLCN3-201ENST00000347613 TNNT2P45379 298 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-201ENST00000347613 GGT6Q6P531 493 aa8.04□□□□□ -1.12
CLCN3-201ENST00000347613 NPATQ14207 1427 aa8.03□□□□□ -1.12
CLCN3-201ENST00000347613 APAF1O14727 1248 aa8.03□□□□□ -1.12
CLCN3-201ENST00000347613 NBR1Q14596 966 aa8.03□□□□□ -1.12
CLCN3-201ENST00000347613 KDM5AP29375 1690 aaKnown RBP8.03□□□□□ -1.12
CLCN3-201ENST00000347613 CHGAP10645 457 aaKnown RBP8.03□□□□□ -1.12
CLCN3-201ENST00000347613 NRXN1Q9ULB1 1477 aa8.02□□□□□ -1.13
CLCN3-201ENST00000347613 KIAA1210Q9ULL0 1709 aa8.02□□□□□ -1.13
CLCN3-201ENST00000347613 TULP1O00294 542 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-201ENST00000347613 NPM2Q86SE8 214 aaKnown RBP8.02□□□□□ -1.13
CLCN3-201ENST00000347613 TNNQ9UQP3 1299 aa8.02□□□□□ -1.13
CLCN3-201ENST00000347613 SHPRHQ149N8 1683 aa8.02□□□□□ -1.13
CLCN3-201ENST00000347613 ZNF518AQ6AHZ1 1483 aa8.02□□□□□ -1.13
CLCN3-201ENST00000347613 PDE4AP27815 886 aa8.02□□□□□ -1.13
CLCN3-201ENST00000347613 PDE3BQ13370 1112 aa8.02□□□□□ -1.13
CLCN3-201ENST00000347613 TRMT2AQ8IZ69 625 aaKnown RBP8.02□□□□□ -1.13
CLCN3-201ENST00000347613 ADGRB1O14514 1584 aa8.02□□□□□ -1.13
CLCN3-201ENST00000347613 PPLO60437 1756 aa8.01□□□□□ -1.13
CLCN3-201ENST00000347613 ZC3H13Q5T200 1668 aaKnown RBP8.01□□□□□ -1.13
CLCN3-201ENST00000347613 SLFN5Q08AF3 891 aa8.01□□□□□ -1.13
CLCN3-201ENST00000347613 NOP58Q9Y2X3 529 aaKnown RBP8.01□□□□□ -1.13
CLCN3-201ENST00000347613 KDM2BQ8NHM5 1336 aa8.01□□□□□ -1.13
CLCN3-201ENST00000347613 ADGRB3O60242 1522 aa8.01□□□□□ -1.13
CLCN3-201ENST00000347613 RRP7AQ9Y3A4 280 aaKnown RBP8.01□□□□□ -1.13
CLCN3-201ENST00000347613 BACH2Q9BYV9 841 aa8□□□□□ -1.13
CLCN3-201ENST00000347613 MYO5BQ9ULV0 1848 aa8□□□□□ -1.13
CLCN3-201ENST00000347613 MYOM2P54296 1465 aa8□□□□□ -1.13
CLCN3-201ENST00000347613 SAFB2Q14151 953 aaKnown RBP eCLIP7.99□□□□□ -1.13
CLCN3-201ENST00000347613 QRICH2Q9H0J4 1663 aa7.99□□□□□ -1.13
CLCN3-201ENST00000347613 MYO3AQ8NEV4 1616 aa7.99□□□□□ -1.13
CLCN3-201ENST00000347613 IPO9Q96P70 1041 aaKnown RBP7.99□□□□□ -1.13
CLCN3-201ENST00000347613 PIK3C2GO75747 1445 aa7.99□□□□□ -1.13
CLCN3-201ENST00000347613 CYB5RLQ6IPT4 315 aa7.98□□□□□ -1.13
CLCN3-201ENST00000347613 KANK1Q14678 1352 aa7.98□□□□□ -1.13
CLCN3-201ENST00000347613 CD109Q6YHK3 1445 aa7.98□□□□□ -1.13
CLCN3-201ENST00000347613 IGHDP01880 384 aa7.98□□□□□ -1.13
CLCN3-201ENST00000347613 SLC4A3P48751 1232 aa7.98□□□□□ -1.13
CLCN3-201ENST00000347613 WDR43Q15061 677 aaKnown RBP eCLIP7.98□□□□□ -1.13
CLCN3-201ENST00000347613 NEUROD2Q15784 382 aa7.98□□□□□ -1.13
CLCN3-201ENST00000347613 INSRP06213 1382 aa7.98□□□□□ -1.13
CLCN3-201ENST00000347613 GOLGA2Q08379 1002 aa7.98□□□□□ -1.13
CLCN3-201ENST00000347613 C14orf93Q9H972 538 aaKnown RBP7.98□□□□□ -1.13
CLCN3-201ENST00000347613 LMTK2Q8IWU2 1503 aa7.98□□□□□ -1.13
CLCN3-201ENST00000347613 POGZQ7Z3K3 1410 aa7.97□□□□□ -1.13
CLCN3-201ENST00000347613 FBLN1P23142 703 aa7.97□□□□□ -1.13
CLCN3-201ENST00000347613 NEURL4Q96JN8 1562 aa7.97□□□□□ -1.13
CLCN3-201ENST00000347613 NSD3Q9BZ95 1437 aa7.97□□□□□ -1.13
CLCN3-201ENST00000347613 YEATS2Q9ULM3 1422 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms