RNA–Protein interactions for RNA: ENST00000344876.8

PCDH18-201, Transcript of protocadherin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH18, Length 5,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-201ENST00000344876 GIMAP7Q8NHV1 300 aa8.02□□□□□ -1.13
PCDH18-201ENST00000344876 IFT57Q9NWB7 429 aa8.01□□□□□ -1.13
PCDH18-201ENST00000344876 LMOD3Q0VAK6 560 aa8.01□□□□□ -1.13
PCDH18-201ENST00000344876 MPNDQ8N594 471 aa8.01□□□□□ -1.13
PCDH18-201ENST00000344876 IL27Q8NEV9 243 aa8.01□□□□□ -1.13
PCDH18-201ENST00000344876 TTLL5Q6EMB2 1281 aa8.01□□□□□ -1.13
PCDH18-201ENST00000344876 BRPF3Q9ULD4 1205 aa8.01□□□□□ -1.13
PCDH18-201ENST00000344876 G3V3G9 751 aa8.01□□□□□ -1.13
PCDH18-201ENST00000344876 SETSIPP0DME0 302 aa8.01□□□□□ -1.13
PCDH18-201ENST00000344876 RALBP1Q15311 655 aa8.01□□□□□ -1.13
PCDH18-201ENST00000344876 DCAF8Q5TAQ9 597 aa8.01□□□□□ -1.13
PCDH18-201ENST00000344876 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.01□□□□□ -1.13
PCDH18-201ENST00000344876 BICD2Q8TD16 824 aa8.01□□□□□ -1.13
PCDH18-201ENST00000344876 SPAG9O60271 1321 aaKnown RBP8□□□□□ -1.13
PCDH18-201ENST00000344876 TDO2P48775 406 aa8□□□□□ -1.13
PCDH18-201ENST00000344876 KANK4Q5T7N3 995 aaPredicted RBP8□□□□□ -1.13
PCDH18-201ENST00000344876 VPS37CA5D8V6 355 aaPredicted RBP8□□□□□ -1.13
PCDH18-201ENST00000344876 TPM1P09493 284 aa7.99□□□□□ -1.13
PCDH18-201ENST00000344876 USP8P40818 1118 aa7.99□□□□□ -1.13
PCDH18-201ENST00000344876 CCDC70Q6NSX1 233 aa7.99□□□□□ -1.13
PCDH18-201ENST00000344876 DZIP1Q86YF9 867 aaKnown RBP7.99□□□□□ -1.13
PCDH18-201ENST00000344876 WDR78Q5VTH9 848 aa7.98□□□□□ -1.13
PCDH18-201ENST00000344876 CCDC191Q8NCU4 936 aa7.98□□□□□ -1.13
PCDH18-201ENST00000344876 GTF2E1P29083 439 aaPredicted RBP7.98□□□□□ -1.13
PCDH18-201ENST00000344876 SKOR2Q2VWA4 1001 aaPredicted RBP7.98□□□□□ -1.13
PCDH18-201ENST00000344876 ZBTB12Q9Y330 459 aaPredicted RBP7.98□□□□□ -1.13
PCDH18-201ENST00000344876 CENPQQ7L2Z9 268 aaPredicted RBP7.98□□□□□ -1.13
PCDH18-201ENST00000344876 ANO2Q9NQ90 1003 aa7.98□□□□□ -1.13
PCDH18-201ENST00000344876 AKAP17AQ02040 695 aaKnown RBP7.98□□□□□ -1.13
PCDH18-201ENST00000344876 IPO4Q8TEX9 1081 aaKnown RBP7.98□□□□□ -1.13
PCDH18-201ENST00000344876 ZNF622Q969S3 477 aaKnown RBP eCLIP7.98□□□□□ -1.13
PCDH18-201ENST00000344876 SAMD1Q6SPF0 538 aaPredicted RBP7.97□□□□□ -1.13
PCDH18-201ENST00000344876 DNAJC2Q99543 621 aaKnown RBP7.97□□□□□ -1.13
PCDH18-201ENST00000344876 HMGN5P82970 282 aaKnown RBP7.97□□□□□ -1.13
PCDH18-201ENST00000344876 NFKBIBQ15653 356 aa7.97□□□□□ -1.13
PCDH18-201ENST00000344876 MNS1Q8NEH6 495 aa7.97□□□□□ -1.13
PCDH18-201ENST00000344876 MPHOSPH9Q99550 1183 aa7.97□□□□□ -1.13
PCDH18-201ENST00000344876 SETD5Q9C0A6 1442 aa7.97□□□□□ -1.13
PCDH18-201ENST00000344876 RRP1P56182 461 aaKnown RBP7.97□□□□□ -1.13
PCDH18-201ENST00000344876 KIF3AQ9Y496 699 aa7.97□□□□□ -1.13
PCDH18-201ENST00000344876 EIF2S2P20042 333 aaKnown RBP7.97□□□□□ -1.13
PCDH18-201ENST00000344876 GTF2A1P52655 376 aaPredicted RBP7.97□□□□□ -1.13
PCDH18-201ENST00000344876 L3MBTL2Q969R5 705 aa7.97□□□□□ -1.13
PCDH18-201ENST00000344876 HDAC5Q9UQL6 1122 aa7.97□□□□□ -1.13
PCDH18-201ENST00000344876 GOLIM4O00461 696 aa7.96□□□□□ -1.13
PCDH18-201ENST00000344876 DIAPH3Q9NSV4 1193 aa7.96□□□□□ -1.13
PCDH18-201ENST00000344876 H0YHG0 523 aa7.96□□□□□ -1.13
PCDH18-201ENST00000344876 IPO7O95373 1038 aaKnown RBP7.96□□□□□ -1.13
PCDH18-201ENST00000344876 PDILTQ8N807 584 aa7.96□□□□□ -1.13
PCDH18-201ENST00000344876 RUFY1Q96T51 708 aa7.96□□□□□ -1.13
PCDH18-201ENST00000344876 TNIKQ9UKE5 1360 aa7.96□□□□□ -1.13
PCDH18-201ENST00000344876 AMPHP49418 695 aa7.96□□□□□ -1.14
PCDH18-201ENST00000344876 ATP6V1DQ9Y5K8 247 aa7.96□□□□□ -1.14
PCDH18-201ENST00000344876 NLRP13Q86W25 1043 aa7.95□□□□□ -1.14
PCDH18-201ENST00000344876 SARNPP82979 210 aaKnown RBP7.95□□□□□ -1.14
PCDH18-201ENST00000344876 KANK1Q14678 1352 aa7.95□□□□□ -1.14
PCDH18-201ENST00000344876 DHX16O60231 1041 aaKnown RBP7.95□□□□□ -1.14
PCDH18-201ENST00000344876 TRHP20396 242 aaPredicted RBP7.95□□□□□ -1.14
PCDH18-201ENST00000344876 TRAK1Q9UPV9 953 aa7.95□□□□□ -1.14
PCDH18-201ENST00000344876 RAB3GAP2Q9H2M9 1393 aa7.95□□□□□ -1.14
PCDH18-201ENST00000344876 CCDC27Q2M243 656 aa7.95□□□□□ -1.14
PCDH18-201ENST00000344876 SASS6Q6UVJ0 657 aa7.95□□□□□ -1.14
PCDH18-201ENST00000344876 CCP110O43303 1012 aa7.94□□□□□ -1.14
PCDH18-201ENST00000344876 CHMP5Q9NZZ3 219 aa7.94□□□□□ -1.14
PCDH18-201ENST00000344876 ZHX1Q9UKY1 873 aaPredicted RBP7.94□□□□□ -1.14
PCDH18-201ENST00000344876 LNPKQ9C0E8 428 aa7.94□□□□□ -1.14
PCDH18-201ENST00000344876 PANK3Q9H999 370 aa7.94□□□□□ -1.14
PCDH18-201ENST00000344876 MTMR7Q9Y216 660 aa7.94□□□□□ -1.14
PCDH18-201ENST00000344876 APAF1O14727 1248 aa7.94□□□□□ -1.14
PCDH18-201ENST00000344876 CPLX1O14810 134 aa7.94□□□□□ -1.14
PCDH18-201ENST00000344876 SH3BGRP55822 239 aaPredicted RBP7.94□□□□□ -1.14
PCDH18-201ENST00000344876 NGDNQ8NEJ9 315 aaKnown RBP7.94□□□□□ -1.14
PCDH18-201ENST00000344876 SYNE3Q6ZMZ3 975 aa7.94□□□□□ -1.14
PCDH18-201ENST00000344876 CGNQ9P2M7 1197 aaKnown RBP7.94□□□□□ -1.14
PCDH18-201ENST00000344876 NASPP49321 788 aaPredicted RBP7.93□□□□□ -1.14
PCDH18-201ENST00000344876 TRIM29Q14134 588 aa7.93□□□□□ -1.14
PCDH18-201ENST00000344876 ZKSCAN2Q63HK3 967 aa7.93□□□□□ -1.14
PCDH18-201ENST00000344876 FMNL2Q96PY5 1086 aa7.93□□□□□ -1.14
PCDH18-201ENST00000344876 EEA1Q15075 1411 aa7.93□□□□□ -1.14
PCDH18-201ENST00000344876 HSP90B2PQ58FF3 399 aa7.93□□□□□ -1.14
PCDH18-201ENST00000344876 SPC24Q8NBT2 197 aa7.93□□□□□ -1.14
PCDH18-201ENST00000344876 NUP155O75694 1391 aa7.93□□□□□ -1.14
PCDH18-201ENST00000344876 ST20-MTHFSA0A0A6YYL1 179 aa7.92□□□□□ -1.14
PCDH18-201ENST00000344876 ZFYVE27Q5T4F4 411 aa7.92□□□□□ -1.14
PCDH18-201ENST00000344876 CAVIN1Q6NZI2 390 aaKnown RBP7.92□□□□□ -1.14
PCDH18-201ENST00000344876 AK7Q96M32 723 aa7.92□□□□□ -1.14
PCDH18-201ENST00000344876 SMC3Q9UQE7 1217 aa7.92□□□□□ -1.14
PCDH18-201ENST00000344876 FANCIQ9NVI1 1328 aa7.92□□□□□ -1.14
PCDH18-201ENST00000344876 ERICH4A6NGS2 130 aa7.92□□□□□ -1.14
PCDH18-201ENST00000344876 NFXL1Q6ZNB6 911 aa7.92□□□□□ -1.14
PCDH18-201ENST00000344876 ZNF428Q96B54 188 aa7.92□□□□□ -1.14
PCDH18-201ENST00000344876 WRNQ14191 1432 aaPredicted RBP eCLIP7.92□□□□□ -1.14
PCDH18-201ENST00000344876 PDE3BQ13370 1112 aa7.92□□□□□ -1.14
PCDH18-201ENST00000344876 TICAM2Q86XR7 235 aa7.92□□□□□ -1.14
PCDH18-201ENST00000344876 ARGLU1Q9NWB6 273 aaPredicted RBP7.92□□□□□ -1.14
PCDH18-201ENST00000344876 TCEAL9Q9UHQ7 104 aa7.92□□□□□ -1.14
PCDH18-201ENST00000344876 HDGFP51858 240 aaKnown RBP7.91□□□□□ -1.14
PCDH18-201ENST00000344876 BANK1Q8NDB2 785 aa7.91□□□□□ -1.14
PCDH18-201ENST00000344876 CAGE1Q8TC20 777 aa7.91□□□□□ -1.14
PCDH18-201ENST00000344876 EIF4G1Q04637 1599 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms