RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 UHRF1BP1Q6BDS2 1440 aa10.59□□□□□ -0.71
GDNF-202ENST00000344622 LTKP29376 864 aa10.59□□□□□ -0.71
GDNF-202ENST00000344622 ZEB1P37275 1124 aaPredicted RBP10.57□□□□□ -0.72
GDNF-202ENST00000344622 ADGRB1O14514 1584 aa10.57□□□□□ -0.72
GDNF-202ENST00000344622 CHGAP10645 457 aaKnown RBP10.57□□□□□ -0.72
GDNF-202ENST00000344622 PIK3C2GO75747 1445 aa10.57□□□□□ -0.72
GDNF-202ENST00000344622 ZNF142P52746 1687 aaPredicted RBP10.57□□□□□ -0.72
GDNF-202ENST00000344622 CEP170BQ9Y4F5 1589 aaPredicted RBP10.56□□□□□ -0.72
GDNF-202ENST00000344622 TNRQ92752 1358 aa10.56□□□□□ -0.72
GDNF-202ENST00000344622 CFAP70Q5T0N1 1121 aa10.56□□□□□ -0.72
GDNF-202ENST00000344622 PPP6R1Q9UPN7 881 aa10.55□□□□□ -0.72
GDNF-202ENST00000344622 TMEM132EQ6IEE7 984 aa10.55□□□□□ -0.72
GDNF-202ENST00000344622 KDM5AP29375 1690 aaKnown RBP10.54□□□□□ -0.72
GDNF-202ENST00000344622 SETD1BQ9UPS6 1966 aaKnown RBP10.54□□□□□ -0.72
GDNF-202ENST00000344622 STRCQ7RTU9 1775 aa10.54□□□□□ -0.72
GDNF-202ENST00000344622 RALGAPBQ86X10 1494 aa10.53□□□□□ -0.72
GDNF-202ENST00000344622 MYOM2P54296 1465 aa10.53□□□□□ -0.72
GDNF-202ENST00000344622 STRCP1A6NGW2 1772 aa10.52□□□□□ -0.73
GDNF-202ENST00000344622 ALKQ9UM73 1620 aa10.52□□□□□ -0.73
GDNF-202ENST00000344622 LMTK3Q96Q04 1460 aa10.51□□□□□ -0.73
GDNF-202ENST00000344622 ARHGEF28Q8N1W1 1705 aaKnown RBP10.51□□□□□ -0.73
GDNF-202ENST00000344622 SLC52A1Q9NWF4 448 aa10.51□□□□□ -0.73
GDNF-202ENST00000344622 HSPA2P54652 639 aa10.51□□□□□ -0.73
GDNF-202ENST00000344622 ARHGAP23Q9P227 1491 aa10.51□□□□□ -0.73
GDNF-202ENST00000344622 METP08581 1390 aa10.51□□□□□ -0.73
GDNF-202ENST00000344622 SLIT1O75093 1534 aa10.5□□□□□ -0.73
GDNF-202ENST00000344622 KIAA1210Q9ULL0 1709 aa10.5□□□□□ -0.73
GDNF-202ENST00000344622 TMEM2Q9UHN6 1383 aa10.5□□□□□ -0.73
GDNF-202ENST00000344622 ADAMTS13Q76LX8 1427 aa10.5□□□□□ -0.73
GDNF-202ENST00000344622 TIMELESSQ9UNS1 1208 aa10.5□□□□□ -0.73
GDNF-202ENST00000344622 RIMS2Q9UQ26 1411 aa10.5□□□□□ -0.73
GDNF-202ENST00000344622 HSPA5P11021 654 aaKnown RBP10.49□□□□□ -0.73
GDNF-202ENST00000344622 PTPRUQ92729 1446 aa10.49□□□□□ -0.73
GDNF-202ENST00000344622 GPRASP1Q5JY77 1395 aa10.48□□□□□ -0.73
GDNF-202ENST00000344622 NLRP1Q9C000 1473 aa10.48□□□□□ -0.73
GDNF-202ENST00000344622 ACIN1Q9UKV3 1341 aaKnown RBP10.48□□□□□ -0.73
GDNF-202ENST00000344622 ESF1Q9H501 851 aaKnown RBP10.48□□□□□ -0.73
GDNF-202ENST00000344622 MED14O60244 1454 aa10.48□□□□□ -0.73
GDNF-202ENST00000344622 POLR1AO95602 1720 aaPredicted RBP10.48□□□□□ -0.73
GDNF-202ENST00000344622 TESK2Q96S53 571 aa10.47□□□□□ -0.73
GDNF-202ENST00000344622 SETBP1Q9Y6X0 1596 aa10.47□□□□□ -0.73
GDNF-202ENST00000344622 ST20-MTHFSA0A0A6YYL1 179 aa10.47□□□□□ -0.73
GDNF-202ENST00000344622 LAMC1P11047 1609 aa10.47□□□□□ -0.73
GDNF-202ENST00000344622 WASHC2AQ641Q2 1341 aa10.47□□□□□ -0.73
GDNF-202ENST00000344622 ROCK2O75116 1388 aaKnown RBP10.47□□□□□ -0.73
GDNF-202ENST00000344622 PLEKHH1Q9ULM0 1364 aa10.47□□□□□ -0.73
GDNF-202ENST00000344622 USP47Q96K76 1375 aa10.46□□□□□ -0.73
GDNF-202ENST00000344622 RBM33Q96EV2 1170 aaKnown RBP10.46□□□□□ -0.73
GDNF-202ENST00000344622 SLC26A8Q96RN1 970 aa10.46□□□□□ -0.73
GDNF-202ENST00000344622 C14orf93Q9H972 538 aaKnown RBP10.46□□□□□ -0.74
GDNF-202ENST00000344622 EP400Q96L91 3159 aa10.45□□□□□ -0.74
GDNF-202ENST00000344622 DISP3Q9P2K9 1392 aa10.45□□□□□ -0.74
GDNF-202ENST00000344622 MYOM1P52179 1685 aa10.45□□□□□ -0.74
GDNF-202ENST00000344622 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.45□□□□□ -0.74
GDNF-202ENST00000344622 QRICH2Q9H0J4 1663 aa10.45□□□□□ -0.74
GDNF-202ENST00000344622 NCKAP5LQ9HCH0 1330 aa10.44□□□□□ -0.74
GDNF-202ENST00000344622 CARD11Q9BXL7 1154 aa10.44□□□□□ -0.74
GDNF-202ENST00000344622 CHD2O14647 1828 aaKnown RBP10.43□□□□□ -0.74
GDNF-202ENST00000344622 RGPD8O14715 1765 aaPredicted RBP10.43□□□□□ -0.74
GDNF-202ENST00000344622 TRAK1Q9UPV9 953 aa10.43□□□□□ -0.74
GDNF-202ENST00000344622 XIRP1Q702N8 1843 aaKnown RBP10.42□□□□□ -0.74
GDNF-202ENST00000344622 GOLGB1Q14789 3259 aaKnown RBP10.42□□□□□ -0.74
GDNF-202ENST00000344622 WAPLQ7Z5K2 1190 aa10.42□□□□□ -0.74
GDNF-202ENST00000344622 ZNF316A6NFI3 1004 aaPredicted RBP10.42□□□□□ -0.74
GDNF-202ENST00000344622 TXNDC2Q86VQ3 553 aa10.42□□□□□ -0.74
GDNF-202ENST00000344622 SRCAPQ6ZRS2 3230 aa10.41□□□□□ -0.74
GDNF-202ENST00000344622 SCAF11Q99590 1463 aaKnown RBP10.41□□□□□ -0.74
GDNF-202ENST00000344622 STAG3Q9UJ98 1225 aa10.41□□□□□ -0.74
GDNF-202ENST00000344622 SAFB2Q14151 953 aaKnown RBP eCLIP10.41□□□□□ -0.74
GDNF-202ENST00000344622 STK26Q9P289 416 aa10.41□□□□□ -0.74
GDNF-202ENST00000344622 TULP4Q9NRJ4 1543 aa10.41□□□□□ -0.74
GDNF-202ENST00000344622 ROBO2Q9HCK4 1378 aa10.4□□□□□ -0.74
GDNF-202ENST00000344622 XRN1Q8IZH2 1706 aaKnown RBP10.4□□□□□ -0.74
GDNF-202ENST00000344622 KIF7Q2M1P5 1343 aa10.4□□□□□ -0.74
GDNF-202ENST00000344622 RPGRIP1LQ68CZ1 1315 aa10.4□□□□□ -0.75
GDNF-202ENST00000344622 YTHDC2Q9H6S0 1430 aaKnown RBP10.4□□□□□ -0.75
GDNF-202ENST00000344622 PLEKHG1Q9ULL1 1385 aa10.39□□□□□ -0.75
GDNF-202ENST00000344622 VGFO15240 615 aaPredicted RBP10.38□□□□□ -0.75
GDNF-202ENST00000344622 KNDC1Q76NI1 1749 aa10.38□□□□□ -0.75
GDNF-202ENST00000344622 NALCNQ8IZF0 1738 aa10.38□□□□□ -0.75
GDNF-202ENST00000344622 USP32Q8NFA0 1604 aa10.37□□□□□ -0.75
GDNF-202ENST00000344622 DIEXFQ68CQ4 756 aaKnown RBP10.37□□□□□ -0.75
GDNF-202ENST00000344622 EIF4G2P78344 907 aaKnown RBP eCLIP10.36□□□□□ -0.75
GDNF-202ENST00000344622 DDX10Q13206 875 aaKnown RBP10.36□□□□□ -0.75
GDNF-202ENST00000344622 CPS1P31327 1500 aa10.36□□□□□ -0.75
GDNF-202ENST00000344622 THEMISQ8N1K5 641 aaPredicted RBP10.35□□□□□ -0.75
GDNF-202ENST00000344622 KCNA6P17658 529 aa10.35□□□□□ -0.75
GDNF-202ENST00000344622 PRAM1Q96QH2 718 aa10.35□□□□□ -0.75
GDNF-202ENST00000344622 UTRNP46939 3433 aa10.35□□□□□ -0.75
GDNF-202ENST00000344622 CCDC7Q96M83 1385 aa10.35□□□□□ -0.75
GDNF-202ENST00000344622 TECPR2O15040 1411 aa10.33□□□□□ -0.76
GDNF-202ENST00000344622 NPHP4O75161 1426 aaPredicted RBP10.33□□□□□ -0.76
GDNF-202ENST00000344622 CD163L1Q9NR16 1453 aa10.32□□□□□ -0.76
GDNF-202ENST00000344622 AMOTL2Q9Y2J4 779 aa10.31□□□□□ -0.76
GDNF-202ENST00000344622 MINK1Q8N4C8 1332 aaPredicted RBP10.31□□□□□ -0.76
GDNF-202ENST00000344622 LRPPRCP42704 1394 aaKnown RBP10.31□□□□□ -0.76
GDNF-202ENST00000344622 ABCC11Q96J66 1382 aa10.3□□□□□ -0.76
GDNF-202ENST00000344622 CABP2Q9NPB3 220 aa10.3□□□□□ -0.76
GDNF-202ENST00000344622 PRR36Q9H6K5 1346 aa10.3□□□□□ -0.76
GDNF-202ENST00000344622 ANKLE2Q86XL3 938 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms