RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 NLRP1Q9C000 1473 aa23.15■■□□□ 1.3
CEACAM1-202ENST00000344391 STAG3Q9UJ98 1225 aa23.15■■□□□ 1.3
CEACAM1-202ENST00000344391 KIAA1210Q9ULL0 1709 aa23.13■■□□□ 1.29
CEACAM1-202ENST00000344391 EIF4G2P78344 907 aaKnown RBP eCLIP23.12■■□□□ 1.29
CEACAM1-202ENST00000344391 UBR1Q8IWV7 1749 aa23.12■■□□□ 1.29
CEACAM1-202ENST00000344391 ROCK2O75116 1388 aaKnown RBP23.12■■□□□ 1.29
CEACAM1-202ENST00000344391 GPRASP1Q5JY77 1395 aa23.12■■□□□ 1.29
CEACAM1-202ENST00000344391 ZFYVE9O95405 1425 aa23.12■■□□□ 1.29
CEACAM1-202ENST00000344391 PLPPR3Q6T4P5 718 aa23.11■■□□□ 1.29
CEACAM1-202ENST00000344391 LAMC1P11047 1609 aa23.11■■□□□ 1.29
CEACAM1-202ENST00000344391 NBPF1Q3BBV0 1214 aa23.11■■□□□ 1.29
CEACAM1-202ENST00000344391 VGFO15240 615 aaPredicted RBP23.1■■□□□ 1.29
CEACAM1-202ENST00000344391 HSPA5P11021 654 aaKnown RBP23.1■■□□□ 1.29
CEACAM1-202ENST00000344391 CARD11Q9BXL7 1154 aa23.1■■□□□ 1.29
CEACAM1-202ENST00000344391 PIK3C2GO75747 1445 aa23.09■■□□□ 1.29
CEACAM1-202ENST00000344391 HIRIP3Q9BW71 556 aaPredicted RBP23.08■■□□□ 1.29
CEACAM1-202ENST00000344391 MYO3AQ8NEV4 1616 aa23.07■■□□□ 1.28
CEACAM1-202ENST00000344391 USP47Q96K76 1375 aa23.06■■□□□ 1.28
CEACAM1-202ENST00000344391 NUTM2DQ5VT03 806 aaPredicted RBP23.06■■□□□ 1.28
CEACAM1-202ENST00000344391 SETD1BQ9UPS6 1966 aaKnown RBP23.06■■□□□ 1.28
CEACAM1-202ENST00000344391 RIMS2Q9UQ26 1411 aa23.05■■□□□ 1.28
CEACAM1-202ENST00000344391 PTPRMP28827 1452 aa23.05■■□□□ 1.28
CEACAM1-202ENST00000344391 CFAP70Q5T0N1 1121 aa23.04■■□□□ 1.28
CEACAM1-202ENST00000344391 C14orf93Q9H972 538 aaKnown RBP23.02■■□□□ 1.28
CEACAM1-202ENST00000344391 TMEM2Q9UHN6 1383 aa23.01■■□□□ 1.27
CEACAM1-202ENST00000344391 SETBP1Q9Y6X0 1596 aa23.01■■□□□ 1.27
CEACAM1-202ENST00000344391 ABCF1Q8NE71 845 aaKnown RBP eCLIP23■■□□□ 1.27
CEACAM1-202ENST00000344391 IQGAP1P46940 1657 aa22.99■■□□□ 1.27
CEACAM1-202ENST00000344391 CEP170BQ9Y4F5 1589 aaPredicted RBP22.99■■□□□ 1.27
CEACAM1-202ENST00000344391 HDGFP51858 240 aaKnown RBP22.98■■□□□ 1.27
CEACAM1-202ENST00000344391 ZNF142P52746 1687 aaPredicted RBP22.98■■□□□ 1.27
CEACAM1-202ENST00000344391 SLIT1O75093 1534 aa22.97■■□□□ 1.27
CEACAM1-202ENST00000344391 ADGRB1O14514 1584 aa22.96■■□□□ 1.27
CEACAM1-202ENST00000344391 SCAF11Q99590 1463 aaKnown RBP22.96■■□□□ 1.27
CEACAM1-202ENST00000344391 ARHGAP23Q9P227 1491 aa22.96■■□□□ 1.27
CEACAM1-202ENST00000344391 THEMISQ8N1K5 641 aaPredicted RBP22.96■■□□□ 1.27
CEACAM1-202ENST00000344391 ST20-MTHFSA0A0A6YYL1 179 aa22.94■■□□□ 1.26
CEACAM1-202ENST00000344391 ALKQ9UM73 1620 aa22.93■■□□□ 1.26
CEACAM1-202ENST00000344391 NRXN3Q9Y4C0 1643 aa22.91■■□□□ 1.26
CEACAM1-202ENST00000344391 POLR1AO95602 1720 aaPredicted RBP22.91■■□□□ 1.26
CEACAM1-202ENST00000344391 KDM4FA0A1W2PPD8 638 aa22.9■■□□□ 1.26
CEACAM1-202ENST00000344391 SETD1AO15047 1707 aaKnown RBP22.9■■□□□ 1.26
CEACAM1-202ENST00000344391 LTKP29376 864 aa22.9■■□□□ 1.26
CEACAM1-202ENST00000344391 DIEXFQ68CQ4 756 aaKnown RBP22.9■■□□□ 1.26
CEACAM1-202ENST00000344391 TMEM132EQ6IEE7 984 aa22.9■■□□□ 1.26
CEACAM1-202ENST00000344391 ASXL1Q8IXJ9 1541 aa22.89■■□□□ 1.26
CEACAM1-202ENST00000344391 C11orf95C9JLR9 678 aaPredicted RBP22.89■■□□□ 1.25
CEACAM1-202ENST00000344391 TXNDC2Q86VQ3 553 aa22.88■■□□□ 1.25
CEACAM1-202ENST00000344391 SENP3Q9H4L4 574 aaPredicted RBP22.88■■□□□ 1.25
CEACAM1-202ENST00000344391 EID1Q9Y6B2 187 aa22.88■■□□□ 1.25
CEACAM1-202ENST00000344391 WASHC2AQ641Q2 1341 aa22.88■■□□□ 1.25
CEACAM1-202ENST00000344391 EIF3AQ14152 1382 aaKnown RBP22.87■■□□□ 1.25
CEACAM1-202ENST00000344391 PLEKHG1Q9ULL1 1385 aa22.87■■□□□ 1.25
CEACAM1-202ENST00000344391 TESK2Q96S53 571 aa22.85■■□□□ 1.25
CEACAM1-202ENST00000344391 CCDC7Q96M83 1385 aa22.85■■□□□ 1.25
CEACAM1-202ENST00000344391 KIF7Q2M1P5 1343 aa22.82■■□□□ 1.24
CEACAM1-202ENST00000344391 TRAK1Q9UPV9 953 aa22.82■■□□□ 1.24
CEACAM1-202ENST00000344391 ADAMTS13Q76LX8 1427 aa22.82■■□□□ 1.24
CEACAM1-202ENST00000344391 ARHGEF28Q8N1W1 1705 aaKnown RBP22.81■■□□□ 1.24
CEACAM1-202ENST00000344391 YTHDC2Q9H6S0 1430 aaKnown RBP22.81■■□□□ 1.24
CEACAM1-202ENST00000344391 DDX10Q13206 875 aaKnown RBP22.8■■□□□ 1.24
CEACAM1-202ENST00000344391 BCANQ96GW7 911 aa22.79■■□□□ 1.24
CEACAM1-202ENST00000344391 MED14O60244 1454 aa22.79■■□□□ 1.24
CEACAM1-202ENST00000344391 METP08581 1390 aa22.77■■□□□ 1.24
CEACAM1-202ENST00000344391 ANKLE2Q86XL3 938 aa22.77■■□□□ 1.24
CEACAM1-202ENST00000344391 CENPJQ9HC77 1338 aaPredicted RBP22.76■■□□□ 1.23
CEACAM1-202ENST00000344391 LRPPRCP42704 1394 aaKnown RBP22.76■■□□□ 1.23
CEACAM1-202ENST00000344391 STK26Q9P289 416 aa22.75■■□□□ 1.23
CEACAM1-202ENST00000344391 SBNO2Q9Y2G9 1366 aa22.75■■□□□ 1.23
CEACAM1-202ENST00000344391 QRICH2Q9H0J4 1663 aa22.75■■□□□ 1.23
CEACAM1-202ENST00000344391 TMF1P82094 1093 aa22.75■■□□□ 1.23
CEACAM1-202ENST00000344391 DISP3Q9P2K9 1392 aa22.74■■□□□ 1.23
CEACAM1-202ENST00000344391 DIP2AQ14689 1571 aa22.74■■□□□ 1.23
CEACAM1-202ENST00000344391 SLC24A1O60721 1099 aa22.74■■□□□ 1.23
CEACAM1-202ENST00000344391 TBX22Q9Y458 520 aa22.73■■□□□ 1.23
CEACAM1-202ENST00000344391 DLC1Q96QB1 1528 aa22.73■■□□□ 1.23
CEACAM1-202ENST00000344391 ABCC11Q96J66 1382 aa22.73■■□□□ 1.23
CEACAM1-202ENST00000344391 KNDC1Q76NI1 1749 aa22.72■■□□□ 1.23
CEACAM1-202ENST00000344391 SLC26A8Q96RN1 970 aa22.71■■□□□ 1.23
CEACAM1-202ENST00000344391 POLR3GLQ9BT43 218 aa22.69■■□□□ 1.22
CEACAM1-202ENST00000344391 TECPR2O15040 1411 aa22.69■■□□□ 1.22
CEACAM1-202ENST00000344391 PRAM1Q96QH2 718 aa22.67■■□□□ 1.22
CEACAM1-202ENST00000344391 CDCA8Q53HL2 280 aa22.66■■□□□ 1.22
CEACAM1-202ENST00000344391 SIRT1Q96EB6 747 aa22.66■■□□□ 1.22
CEACAM1-202ENST00000344391 CPS1P31327 1500 aa22.66■■□□□ 1.22
CEACAM1-202ENST00000344391 POGKQ9P215 609 aa22.65■■□□□ 1.22
CEACAM1-202ENST00000344391 NPHP4O75161 1426 aaPredicted RBP22.65■■□□□ 1.22
CEACAM1-202ENST00000344391 PTPRUQ92729 1446 aa22.65■■□□□ 1.22
CEACAM1-202ENST00000344391 LMTK3Q96Q04 1460 aa22.64■■□□□ 1.21
CEACAM1-202ENST00000344391 NCKAP5LQ9HCH0 1330 aa22.64■■□□□ 1.21
CEACAM1-202ENST00000344391 PIK3R4Q99570 1358 aa22.63■■□□□ 1.21
CEACAM1-202ENST00000344391 FAM135BQ49AJ0 1406 aa22.63■■□□□ 1.21
CEACAM1-202ENST00000344391 SAFB2Q14151 953 aaKnown RBP eCLIP22.62■■□□□ 1.21
CEACAM1-202ENST00000344391 WAPLQ7Z5K2 1190 aa22.61■■□□□ 1.21
CEACAM1-202ENST00000344391 TULP4Q9NRJ4 1543 aa22.61■■□□□ 1.21
CEACAM1-202ENST00000344391 PLEKHH1Q9ULM0 1364 aa22.61■■□□□ 1.21
CEACAM1-202ENST00000344391 XRN1Q8IZH2 1706 aaKnown RBP22.6■■□□□ 1.21
CEACAM1-202ENST00000344391 AMOTL2Q9Y2J4 779 aa22.6■■□□□ 1.21
CEACAM1-202ENST00000344391 CHD2O14647 1828 aaKnown RBP22.6■■□□□ 1.21
CEACAM1-202ENST00000344391 ROBO2Q9HCK4 1378 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms