RNA–Protein interactions for RNA: ENST00000344135.5

TRIO-201, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-201ENST00000344135 ADGRB3O60242 1522 aa11.84□□□□□ -0.51
TRIO-201ENST00000344135 ESF1Q9H501 851 aaKnown RBP11.83□□□□□ -0.52
TRIO-201ENST00000344135 TRAK1Q9UPV9 953 aa11.83□□□□□ -0.52
TRIO-201ENST00000344135 ARHGAP31Q2M1Z3 1444 aa11.83□□□□□ -0.52
TRIO-201ENST00000344135 STAG3Q9UJ98 1225 aa11.83□□□□□ -0.52
TRIO-201ENST00000344135 MYO5BQ9ULV0 1848 aa11.82□□□□□ -0.52
TRIO-201ENST00000344135 PRKRIP1Q9H875 184 aaPredicted RBP11.81□□□□□ -0.52
TRIO-201ENST00000344135 ZMYM3Q14202 1370 aa11.81□□□□□ -0.52
TRIO-201ENST00000344135 PREX1Q8TCU6 1659 aa11.81□□□□□ -0.52
TRIO-201ENST00000344135 SLC52A1Q9NWF4 448 aa11.81□□□□□ -0.52
TRIO-201ENST00000344135 AGLP35573 1532 aa11.81□□□□□ -0.52
TRIO-201ENST00000344135 SAFB2Q14151 953 aaKnown RBP eCLIP11.81□□□□□ -0.52
TRIO-201ENST00000344135 ERVK-7P63135 1459 aa11.81□□□□□ -0.52
TRIO-201ENST00000344135 SENP3-EIF4A1A0A087X0R7 540 aa11.81□□□□□ -0.52
TRIO-201ENST00000344135 PIK3C2BO00750 1634 aa11.8□□□□□ -0.52
TRIO-201ENST00000344135 CENPBP07199 599 aaPredicted RBP11.8□□□□□ -0.52
TRIO-201ENST00000344135 STK26Q9P289 416 aa11.8□□□□□ -0.52
TRIO-201ENST00000344135 ZC3H13Q5T200 1668 aaKnown RBP11.79□□□□□ -0.52
TRIO-201ENST00000344135 REREQ9P2R6 1566 aa11.79□□□□□ -0.52
TRIO-201ENST00000344135 IFT172Q9UG01 1749 aa11.79□□□□□ -0.52
TRIO-201ENST00000344135 PIK3C2GO75747 1445 aa11.78□□□□□ -0.52
TRIO-201ENST00000344135 MYOM2P54296 1465 aa11.78□□□□□ -0.52
TRIO-201ENST00000344135 POLR1AO95602 1720 aaPredicted RBP11.78□□□□□ -0.52
TRIO-201ENST00000344135 C14orf93Q9H972 538 aaKnown RBP11.77□□□□□ -0.52
TRIO-201ENST00000344135 SCAF11Q99590 1463 aaKnown RBP11.77□□□□□ -0.52
TRIO-201ENST00000344135 PPLO60437 1756 aa11.77□□□□□ -0.52
TRIO-201ENST00000344135 TMF1P82094 1093 aa11.77□□□□□ -0.53
TRIO-201ENST00000344135 SCAF1Q9H7N4 1312 aaKnown RBP11.77□□□□□ -0.53
TRIO-201ENST00000344135 NEXMIFQ5QGS0 1516 aa11.77□□□□□ -0.53
TRIO-201ENST00000344135 VGFO15240 615 aaPredicted RBP11.77□□□□□ -0.53
TRIO-201ENST00000344135 NRXN1Q9ULB1 1477 aa11.76□□□□□ -0.53
TRIO-201ENST00000344135 STAC3Q96MF2 364 aa11.76□□□□□ -0.53
TRIO-201ENST00000344135 PANK3Q9H999 370 aa11.76□□□□□ -0.53
TRIO-201ENST00000344135 TMEM131LA2VDJ0 1609 aa11.76□□□□□ -0.53
TRIO-201ENST00000344135 CCER2I3L3R5 266 aa11.75□□□□□ -0.53
TRIO-201ENST00000344135 FAM9BQ8IZU0 186 aa11.75□□□□□ -0.53
TRIO-201ENST00000344135 PPP6R1Q9UPN7 881 aa11.75□□□□□ -0.53
TRIO-201ENST00000344135 IQGAP1P46940 1657 aa11.75□□□□□ -0.53
TRIO-201ENST00000344135 NEURL4Q96JN8 1562 aa11.74□□□□□ -0.53
TRIO-201ENST00000344135 CC2D1BQ5T0F9 858 aaKnown RBP11.74□□□□□ -0.53
TRIO-201ENST00000344135 RPGRIP1LQ68CZ1 1315 aa11.74□□□□□ -0.53
TRIO-201ENST00000344135 MRS2Q9HD23 443 aa11.74□□□□□ -0.53
TRIO-201ENST00000344135 LAMC1P11047 1609 aa11.73□□□□□ -0.53
TRIO-201ENST00000344135 PER1O15534 1290 aaPredicted RBP11.73□□□□□ -0.53
TRIO-201ENST00000344135 ADGRB1O14514 1584 aa11.72□□□□□ -0.53
TRIO-201ENST00000344135 A2ML1A8K2U0 1454 aa11.72□□□□□ -0.53
TRIO-201ENST00000344135 CENPJQ9HC77 1338 aaPredicted RBP11.71□□□□□ -0.53
TRIO-201ENST00000344135 SPATA31D1Q6ZQQ2 1576 aa11.71□□□□□ -0.53
TRIO-201ENST00000344135 GTF3C3Q9Y5Q9 886 aa11.71□□□□□ -0.53
TRIO-201ENST00000344135 TNRQ92752 1358 aa11.7□□□□□ -0.54
TRIO-201ENST00000344135 BCANQ96GW7 911 aa11.7□□□□□ -0.54
TRIO-201ENST00000344135 EIF3AQ14152 1382 aaKnown RBP11.69□□□□□ -0.54
TRIO-201ENST00000344135 KIAA1210Q9ULL0 1709 aa11.69□□□□□ -0.54
TRIO-201ENST00000344135 ASXL1Q8IXJ9 1541 aa11.69□□□□□ -0.54
TRIO-201ENST00000344135 RIMS2Q9UQ26 1411 aa11.69□□□□□ -0.54
TRIO-201ENST00000344135 HNRNPUQ00839 825 aaKnown RBP eCLIP11.69□□□□□ -0.54
TRIO-201ENST00000344135 WAPLQ7Z5K2 1190 aa11.68□□□□□ -0.54
TRIO-201ENST00000344135 TMC1Q8TDI8 760 aa11.68□□□□□ -0.54
TRIO-201ENST00000344135 LTKP29376 864 aa11.68□□□□□ -0.54
TRIO-201ENST00000344135 PRAM1Q96QH2 718 aa11.68□□□□□ -0.54
TRIO-201ENST00000344135 SLC12A5Q9H2X9 1139 aa11.68□□□□□ -0.54
TRIO-201ENST00000344135 MINK1Q8N4C8 1332 aaPredicted RBP11.68□□□□□ -0.54
TRIO-201ENST00000344135 CABP2Q9NPB3 220 aa11.67□□□□□ -0.54
TRIO-201ENST00000344135 SLC26A8Q96RN1 970 aa11.66□□□□□ -0.54
TRIO-201ENST00000344135 CARD14Q9BXL6 1004 aa11.66□□□□□ -0.54
TRIO-201ENST00000344135 ZFYVE9O95405 1425 aa11.65□□□□□ -0.54
TRIO-201ENST00000344135 METP08581 1390 aa11.65□□□□□ -0.54
TRIO-201ENST00000344135 PTPRMP28827 1452 aa11.65□□□□□ -0.54
TRIO-201ENST00000344135 SETBP1Q9Y6X0 1596 aa11.65□□□□□ -0.54
TRIO-201ENST00000344135 PLEKHH1Q9ULM0 1364 aa11.64□□□□□ -0.55
TRIO-201ENST00000344135 TXNDC2Q86VQ3 553 aa11.64□□□□□ -0.55
TRIO-201ENST00000344135 POGKQ9P215 609 aa11.64□□□□□ -0.55
TRIO-201ENST00000344135 ALKQ9UM73 1620 aa11.64□□□□□ -0.55
TRIO-201ENST00000344135 YTHDC2Q9H6S0 1430 aaKnown RBP11.64□□□□□ -0.55
TRIO-201ENST00000344135 KNSTRNQ9Y448 316 aa11.64□□□□□ -0.55
TRIO-201ENST00000344135 C3P01024 1663 aa11.63□□□□□ -0.55
TRIO-201ENST00000344135 FER1L4A9Z1Z3 1794 aa11.63□□□□□ -0.55
TRIO-201ENST00000344135 QRICH2Q9H0J4 1663 aa11.63□□□□□ -0.55
TRIO-201ENST00000344135 AMER1Q5JTC6 1135 aaPredicted RBP11.63□□□□□ -0.55
TRIO-201ENST00000344135 TMEM2Q9UHN6 1383 aa11.63□□□□□ -0.55
TRIO-201ENST00000344135 SRPK2P78362 688 aaKnown RBP11.62□□□□□ -0.55
TRIO-201ENST00000344135 CDCA8Q53HL2 280 aa11.62□□□□□ -0.55
TRIO-201ENST00000344135 KTN1Q86UP2 1357 aaKnown RBP11.62□□□□□ -0.55
TRIO-201ENST00000344135 ARHGEF28Q8N1W1 1705 aaKnown RBP11.62□□□□□ -0.55
TRIO-201ENST00000344135 MYOM1P52179 1685 aa11.62□□□□□ -0.55
TRIO-201ENST00000344135 TNNT2P45379 298 aaPredicted RBP11.61□□□□□ -0.55
TRIO-201ENST00000344135 MYBBP1AQ9BQG0 1328 aaKnown RBP11.61□□□□□ -0.55
TRIO-201ENST00000344135 PARD3Q8TEW0 1356 aa11.61□□□□□ -0.55
TRIO-201ENST00000344135 UBR1Q8IWV7 1749 aa11.6□□□□□ -0.55
TRIO-201ENST00000344135 PNISRQ8TF01 805 aaKnown RBP11.6□□□□□ -0.55
TRIO-201ENST00000344135 SALL2Q9Y467 1007 aaPredicted RBP11.6□□□□□ -0.55
TRIO-201ENST00000344135 NCKAP5LQ9HCH0 1330 aa11.6□□□□□ -0.55
TRIO-201ENST00000344135 TULP4Q9NRJ4 1543 aa11.6□□□□□ -0.55
TRIO-201ENST00000344135 SBNO2Q9Y2G9 1366 aa11.6□□□□□ -0.55
TRIO-201ENST00000344135 KDM5AP29375 1690 aaKnown RBP11.59□□□□□ -0.55
TRIO-201ENST00000344135 NUTM2FA1L443 756 aa11.59□□□□□ -0.55
TRIO-201ENST00000344135 RALBP1Q15311 655 aa11.59□□□□□ -0.55
TRIO-201ENST00000344135 NRXN3Q9Y4C0 1643 aa11.59□□□□□ -0.55
TRIO-201ENST00000344135 MYO3AQ8NEV4 1616 aa11.59□□□□□ -0.55
TRIO-201ENST00000344135 EVC2Q86UK5 1308 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms