RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 CPSF2Q9P2I0 782 aaKnown RBP4.59□□□□□ -1.68
SYNE2-202ENST00000344113 OS9Q13438 667 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-202ENST00000344113 GJC2Q5T442 439 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-202ENST00000344113 HDAC5Q9UQL6 1122 aa4.58□□□□□ -1.68
SYNE2-202ENST00000344113 NBPF9Q3BBW0 867 aa4.58□□□□□ -1.68
SYNE2-202ENST00000344113 LMOD2Q6P5Q4 547 aa4.58□□□□□ -1.68
SYNE2-202ENST00000344113 NOC3LQ8WTT2 800 aaKnown RBP4.58□□□□□ -1.68
SYNE2-202ENST00000344113 KCNH8Q96L42 1107 aa4.58□□□□□ -1.68
SYNE2-202ENST00000344113 CCDC94Q9BW85 323 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-202ENST00000344113 WDR78Q5VTH9 848 aa4.58□□□□□ -1.68
SYNE2-202ENST00000344113 AKNAQ7Z591 1439 aa4.58□□□□□ -1.68
SYNE2-202ENST00000344113 GIMAP7Q8NHV1 300 aa4.58□□□□□ -1.68
SYNE2-202ENST00000344113 CCDC91Q7Z6B0 441 aa4.58□□□□□ -1.68
SYNE2-202ENST00000344113 EIF3AQ14152 1382 aaKnown RBP4.58□□□□□ -1.68
SYNE2-202ENST00000344113 GON4LQ3T8J9 2241 aa4.58□□□□□ -1.68
SYNE2-202ENST00000344113 TTLL5Q6EMB2 1281 aa4.58□□□□□ -1.68
SYNE2-202ENST00000344113 FAM13BQ9NYF5 915 aa4.58□□□□□ -1.68
SYNE2-202ENST00000344113 PEX19P40855 299 aa4.57□□□□□ -1.68
SYNE2-202ENST00000344113 FAM114A1Q8IWE2 563 aa4.57□□□□□ -1.68
SYNE2-202ENST00000344113 VGLL3A8MV65 326 aa4.57□□□□□ -1.68
SYNE2-202ENST00000344113 NUCB2P80303 420 aa4.57□□□□□ -1.68
SYNE2-202ENST00000344113 CCDC39Q9UFE4 941 aa4.57□□□□□ -1.68
SYNE2-202ENST00000344113 CCDC196A0A1B0GTZ2 297 aa4.57□□□□□ -1.68
SYNE2-202ENST00000344113 OFD1O75665 1012 aa4.57□□□□□ -1.68
SYNE2-202ENST00000344113 HSP90AB1P08238 724 aaKnown RBP4.57□□□□□ -1.68
SYNE2-202ENST00000344113 TRIM6-TRIM34B2RNG4 842 aa4.57□□□□□ -1.68
SYNE2-202ENST00000344113 TRIM34Q9BYJ4 488 aa4.57□□□□□ -1.68
SYNE2-202ENST00000344113 ANKRD18BA2A2Z9 1011 aa4.57□□□□□ -1.68
SYNE2-202ENST00000344113 GZF1Q9H116 711 aaPredicted RBP4.57□□□□□ -1.68
SYNE2-202ENST00000344113 ZKSCAN8Q15776 578 aaPredicted RBP4.57□□□□□ -1.68
SYNE2-202ENST00000344113 MYCBPQ99417 103 aaPredicted RBP4.57□□□□□ -1.68
SYNE2-202ENST00000344113 SLC26A8Q96RN1 970 aa4.57□□□□□ -1.68
SYNE2-202ENST00000344113 MAPK8IP3Q9UPT6 1336 aa4.56□□□□□ -1.68
SYNE2-202ENST00000344113 KIF2AO00139 706 aaPredicted RBP4.56□□□□□ -1.68
SYNE2-202ENST00000344113 RGS22Q8NE09 1264 aa4.56□□□□□ -1.68
SYNE2-202ENST00000344113 MYO6Q9UM54 1294 aa4.56□□□□□ -1.68
SYNE2-202ENST00000344113 RAD50Q92878 1312 aa4.56□□□□□ -1.68
SYNE2-202ENST00000344113 RSF1Q96T23 1441 aaPredicted RBP4.56□□□□□ -1.68
SYNE2-202ENST00000344113 GOLIM4O00461 696 aa4.56□□□□□ -1.68
SYNE2-202ENST00000344113 ATAD2Q6PL18 1390 aa4.56□□□□□ -1.68
SYNE2-202ENST00000344113 SH2D4BQ5SQS7 431 aa4.56□□□□□ -1.68
SYNE2-202ENST00000344113 MKL1Q969V6 931 aa4.56□□□□□ -1.68
SYNE2-202ENST00000344113 SPATA24Q86W54 205 aa4.56□□□□□ -1.68
SYNE2-202ENST00000344113 SENP3-EIF4A1A0A087X0R7 540 aa4.56□□□□□ -1.68
SYNE2-202ENST00000344113 DDX10Q13206 875 aaKnown RBP4.56□□□□□ -1.68
SYNE2-202ENST00000344113 CENPHQ9H3R5 247 aa4.56□□□□□ -1.68
SYNE2-202ENST00000344113 TNIKQ9UKE5 1360 aa4.56□□□□□ -1.68
SYNE2-202ENST00000344113 KIAA0754O94854 1291 aa4.56□□□□□ -1.68
SYNE2-202ENST00000344113 NCAPGQ9BPX3 1015 aa4.56□□□□□ -1.68
SYNE2-202ENST00000344113 CAVIN2O95810 425 aa4.56□□□□□ -1.68
SYNE2-202ENST00000344113 ATP6V1DQ9Y5K8 247 aa4.56□□□□□ -1.68
SYNE2-202ENST00000344113 NF2P35240 595 aa4.56□□□□□ -1.68
SYNE2-202ENST00000344113 AKAP17AQ02040 695 aaKnown RBP4.56□□□□□ -1.68
SYNE2-202ENST00000344113 RASSF4Q9H2L5 321 aa4.56□□□□□ -1.68
SYNE2-202ENST00000344113 H0YHG0 523 aa4.55□□□□□ -1.68
SYNE2-202ENST00000344113 ABCF2Q9UG63 623 aa4.55□□□□□ -1.68
SYNE2-202ENST00000344113 ZHX1Q9UKY1 873 aaPredicted RBP4.55□□□□□ -1.68
SYNE2-202ENST00000344113 FILIP1LQ4L180 1135 aa4.55□□□□□ -1.68
SYNE2-202ENST00000344113 HSP90AB4PQ58FF6 505 aa4.55□□□□□ -1.68
SYNE2-202ENST00000344113 SASH1O94885 1247 aa4.55□□□□□ -1.68
SYNE2-202ENST00000344113 PPP4R3BQ5MIZ7 849 aa4.55□□□□□ -1.68
SYNE2-202ENST00000344113 GTF2A1P52655 376 aaPredicted RBP4.55□□□□□ -1.68
SYNE2-202ENST00000344113 MICALCLQ6ZW33 695 aa4.55□□□□□ -1.68
SYNE2-202ENST00000344113 TCHPQ9BT92 498 aa4.55□□□□□ -1.68
SYNE2-202ENST00000344113 BAG4O95429 457 aaKnown RBP4.55□□□□□ -1.68
SYNE2-202ENST00000344113 BMS1Q14692 1282 aaKnown RBP4.55□□□□□ -1.68
SYNE2-202ENST00000344113 SLC4A3P48751 1232 aa4.55□□□□□ -1.68
SYNE2-202ENST00000344113 DRC7Q8IY82 874 aa4.55□□□□□ -1.68
SYNE2-202ENST00000344113 PDILTQ8N807 584 aa4.55□□□□□ -1.68
SYNE2-202ENST00000344113 SLMAPQ14BN4 828 aa4.55□□□□□ -1.68
SYNE2-202ENST00000344113 SLC4A1APQ9BWU0 796 aaKnown RBP4.55□□□□□ -1.68
SYNE2-202ENST00000344113 LSM14AQ8ND56 463 aaKnown RBP4.54□□□□□ -1.68
SYNE2-202ENST00000344113 UBA5Q9GZZ9 404 aa4.54□□□□□ -1.68
SYNE2-202ENST00000344113 SATB1Q01826 763 aa4.54□□□□□ -1.68
SYNE2-202ENST00000344113 APLFQ8IW19 511 aaPredicted RBP4.54□□□□□ -1.68
SYNE2-202ENST00000344113 CCDC50Q8IVM0 306 aa4.54□□□□□ -1.68
SYNE2-202ENST00000344113 WDR66Q8TBY9 1149 aa4.54□□□□□ -1.68
SYNE2-202ENST00000344113 RMDN2Q96LZ7 410 aa4.54□□□□□ -1.68
SYNE2-202ENST00000344113 KLHL10Q6JEL2 608 aa4.54□□□□□ -1.68
SYNE2-202ENST00000344113 DZIP1Q86YF9 867 aaKnown RBP4.54□□□□□ -1.68
SYNE2-202ENST00000344113 TMC1Q8TDI8 760 aa4.54□□□□□ -1.68
SYNE2-202ENST00000344113 ANAPC15P60006 121 aa4.54□□□□□ -1.68
SYNE2-202ENST00000344113 NFKBIBQ15653 356 aa4.54□□□□□ -1.68
SYNE2-202ENST00000344113 KIAA1211Q6ZU35 1233 aa4.54□□□□□ -1.68
SYNE2-202ENST00000344113 PRDM10Q9NQV6 1147 aa4.54□□□□□ -1.68
SYNE2-202ENST00000344113 IVLP07476 585 aa4.54□□□□□ -1.68
SYNE2-202ENST00000344113 SLKQ9H2G2 1235 aaPredicted RBP4.54□□□□□ -1.68
SYNE2-202ENST00000344113 CERS3Q8IU89 383 aa4.54□□□□□ -1.68
SYNE2-202ENST00000344113 IPO7O95373 1038 aaKnown RBP4.54□□□□□ -1.68
SYNE2-202ENST00000344113 MED4Q9NPJ6 270 aa4.54□□□□□ -1.68
SYNE2-202ENST00000344113 LMOD3Q0VAK6 560 aa4.53□□□□□ -1.68
SYNE2-202ENST00000344113 RBBP5Q15291 538 aaKnown RBP4.53□□□□□ -1.68
SYNE2-202ENST00000344113 RNF168Q8IYW5 571 aaPredicted RBP4.53□□□□□ -1.68
SYNE2-202ENST00000344113 ZNF500O60304 480 aaPredicted RBP4.53□□□□□ -1.68
SYNE2-202ENST00000344113 CDC37Q16543 378 aaPredicted RBP4.53□□□□□ -1.68
SYNE2-202ENST00000344113 NBPF6Q5VWK0 638 aa4.53□□□□□ -1.68
SYNE2-202ENST00000344113 NBPF5PQ86XG9 351 aaPredicted RBP4.53□□□□□ -1.68
SYNE2-202ENST00000344113 NBPF4Q96M43 638 aa4.53□□□□□ -1.68
SYNE2-202ENST00000344113 MAP2K1Q02750 393 aaPredicted RBP4.53□□□□□ -1.68
SYNE2-202ENST00000344113 ROCK2O75116 1388 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms