RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 SLC26A8Q96RN1 970 aa11.4□□□□□ -0.58
HMGCR-202ENST00000343975 EIF3AQ14152 1382 aaKnown RBP11.4□□□□□ -0.58
HMGCR-202ENST00000343975 E9PCH4 1651 aa11.4□□□□□ -0.58
HMGCR-202ENST00000343975 ADAMTSL3P82987 1691 aa11.4□□□□□ -0.58
HMGCR-202ENST00000343975 SPATA31D1Q6ZQQ2 1576 aa11.4□□□□□ -0.58
HMGCR-202ENST00000343975 SPHKAPQ2M3C7 1700 aa11.39□□□□□ -0.59
HMGCR-202ENST00000343975 PREX1Q8TCU6 1659 aa11.38□□□□□ -0.59
HMGCR-202ENST00000343975 NCKAP5LQ9HCH0 1330 aa11.37□□□□□ -0.59
HMGCR-202ENST00000343975 CDCA8Q53HL2 280 aa11.37□□□□□ -0.59
HMGCR-202ENST00000343975 CFAP70Q5T0N1 1121 aa11.37□□□□□ -0.59
HMGCR-202ENST00000343975 PLA2R1Q13018 1463 aa11.37□□□□□ -0.59
HMGCR-202ENST00000343975 ADGRB3O60242 1522 aa11.36□□□□□ -0.59
HMGCR-202ENST00000343975 C3P01024 1663 aa11.36□□□□□ -0.59
HMGCR-202ENST00000343975 KIF1BO60333 1816 aa11.36□□□□□ -0.59
HMGCR-202ENST00000343975 ADGRF5Q8IZF2 1346 aa11.36□□□□□ -0.59
HMGCR-202ENST00000343975 TRAK1Q9UPV9 953 aa11.36□□□□□ -0.59
HMGCR-202ENST00000343975 SCAF11Q99590 1463 aaKnown RBP11.35□□□□□ -0.59
HMGCR-202ENST00000343975 CEP170BQ9Y4F5 1589 aaPredicted RBP11.35□□□□□ -0.59
HMGCR-202ENST00000343975 TBX22Q9Y458 520 aa11.35□□□□□ -0.59
HMGCR-202ENST00000343975 PROSER2Q86WR7 435 aaPredicted RBP11.34□□□□□ -0.59
HMGCR-202ENST00000343975 SAFB2Q14151 953 aaKnown RBP eCLIP11.33□□□□□ -0.59
HMGCR-202ENST00000343975 TMEM132EQ6IEE7 984 aa11.33□□□□□ -0.59
HMGCR-202ENST00000343975 LTKP29376 864 aa11.33□□□□□ -0.6
HMGCR-202ENST00000343975 SPATA31E1Q6ZUB1 1445 aa11.33□□□□□ -0.6
HMGCR-202ENST00000343975 CLTCL1P53675 1640 aa11.33□□□□□ -0.6
HMGCR-202ENST00000343975 C14orf93Q9H972 538 aaKnown RBP11.33□□□□□ -0.6
HMGCR-202ENST00000343975 NPHP4O75161 1426 aaPredicted RBP11.33□□□□□ -0.6
HMGCR-202ENST00000343975 PLEKHG1Q9ULL1 1385 aa11.32□□□□□ -0.6
HMGCR-202ENST00000343975 SYNMO15061 1565 aa11.32□□□□□ -0.6
HMGCR-202ENST00000343975 SIGLEC1Q9BZZ2 1709 aa11.31□□□□□ -0.6
HMGCR-202ENST00000343975 TMF1P82094 1093 aa11.31□□□□□ -0.6
HMGCR-202ENST00000343975 PIK3C2BO00750 1634 aa11.31□□□□□ -0.6
HMGCR-202ENST00000343975 AMOTL2Q9Y2J4 779 aa11.3□□□□□ -0.6
HMGCR-202ENST00000343975 CENPJQ9HC77 1338 aaPredicted RBP11.3□□□□□ -0.6
HMGCR-202ENST00000343975 SRPK2P78362 688 aaKnown RBP11.3□□□□□ -0.6
HMGCR-202ENST00000343975 ZFYVE9O95405 1425 aa11.29□□□□□ -0.6
HMGCR-202ENST00000343975 ATF3P18847 181 aa11.29□□□□□ -0.6
HMGCR-202ENST00000343975 MYO3AQ8NEV4 1616 aa11.29□□□□□ -0.6
HMGCR-202ENST00000343975 NBPF8Q3BBV2 869 aa11.28□□□□□ -0.6
HMGCR-202ENST00000343975 MYOM2P54296 1465 aa11.28□□□□□ -0.6
HMGCR-202ENST00000343975 NBPF1Q3BBV0 1214 aa11.28□□□□□ -0.6
HMGCR-202ENST00000343975 PRAG1Q86YV5 1406 aa11.28□□□□□ -0.6
HMGCR-202ENST00000343975 KCNA6P17658 529 aa11.28□□□□□ -0.6
HMGCR-202ENST00000343975 SCAF1Q9H7N4 1312 aaKnown RBP11.27□□□□□ -0.6
HMGCR-202ENST00000343975 USP47Q96K76 1375 aa11.27□□□□□ -0.6
HMGCR-202ENST00000343975 TMC1Q8TDI8 760 aa11.27□□□□□ -0.61
HMGCR-202ENST00000343975 PRAM1Q96QH2 718 aa11.27□□□□□ -0.61
HMGCR-202ENST00000343975 PIK3R4Q99570 1358 aa11.27□□□□□ -0.61
HMGCR-202ENST00000343975 EVC2Q86UK5 1308 aa11.26□□□□□ -0.61
HMGCR-202ENST00000343975 MINK1Q8N4C8 1332 aaPredicted RBP11.26□□□□□ -0.61
HMGCR-202ENST00000343975 HSPA5P11021 654 aaKnown RBP11.25□□□□□ -0.61
HMGCR-202ENST00000343975 ST20-MTHFSA0A0A6YYL1 179 aa11.25□□□□□ -0.61
HMGCR-202ENST00000343975 ZNF316A6NFI3 1004 aaPredicted RBP11.24□□□□□ -0.61
HMGCR-202ENST00000343975 TMEM131LA2VDJ0 1609 aa11.24□□□□□ -0.61
HMGCR-202ENST00000343975 LRPPRCP42704 1394 aaKnown RBP11.24□□□□□ -0.61
HMGCR-202ENST00000343975 NEURL4Q96JN8 1562 aa11.24□□□□□ -0.61
HMGCR-202ENST00000343975 SLIT1O75093 1534 aa11.24□□□□□ -0.61
HMGCR-202ENST00000343975 HIRIP3Q9BW71 556 aaPredicted RBP11.23□□□□□ -0.61
HMGCR-202ENST00000343975 ARHGAP23Q9P227 1491 aa11.23□□□□□ -0.61
HMGCR-202ENST00000343975 RALGAPBQ86X10 1494 aa11.23□□□□□ -0.61
HMGCR-202ENST00000343975 PIK3C2GO75747 1445 aa11.22□□□□□ -0.61
HMGCR-202ENST00000343975 YTHDC2Q9H6S0 1430 aaKnown RBP11.22□□□□□ -0.61
HMGCR-202ENST00000343975 MSH6P52701 1360 aa11.22□□□□□ -0.61
HMGCR-202ENST00000343975 NEXMIFQ5QGS0 1516 aa11.22□□□□□ -0.61
HMGCR-202ENST00000343975 CADPS2Q86UW7 1296 aa11.22□□□□□ -0.61
HMGCR-202ENST00000343975 LMTK3Q96Q04 1460 aa11.22□□□□□ -0.61
HMGCR-202ENST00000343975 UBR1Q8IWV7 1749 aa11.21□□□□□ -0.62
HMGCR-202ENST00000343975 ABCC11Q96J66 1382 aa11.21□□□□□ -0.62
HMGCR-202ENST00000343975 HDGFL2Q7Z4V5 671 aaPredicted RBP11.21□□□□□ -0.62
HMGCR-202ENST00000343975 WAPLQ7Z5K2 1190 aa11.21□□□□□ -0.62
HMGCR-202ENST00000343975 NUTM2FA1L443 756 aa11.2□□□□□ -0.62
HMGCR-202ENST00000343975 NGDNQ8NEJ9 315 aaKnown RBP11.2□□□□□ -0.62
HMGCR-202ENST00000343975 KDM5AP29375 1690 aaKnown RBP11.2□□□□□ -0.62
HMGCR-202ENST00000343975 SIRT1Q96EB6 747 aa11.2□□□□□ -0.62
HMGCR-202ENST00000343975 C19orf44Q9H6X5 657 aa11.19□□□□□ -0.62
HMGCR-202ENST00000343975 TERF2IPQ9NYB0 399 aa11.19□□□□□ -0.62
HMGCR-202ENST00000343975 TOM1O60784 492 aa11.19□□□□□ -0.62
HMGCR-202ENST00000343975 METP08581 1390 aa11.19□□□□□ -0.62
HMGCR-202ENST00000343975 ZNF142P52746 1687 aaPredicted RBP11.18□□□□□ -0.62
HMGCR-202ENST00000343975 ZNF335Q9H4Z2 1342 aaPredicted RBP11.18□□□□□ -0.62
HMGCR-202ENST00000343975 DIP2AQ14689 1571 aa11.17□□□□□ -0.62
HMGCR-202ENST00000343975 HAP1P54257 671 aaPredicted RBP11.17□□□□□ -0.62
HMGCR-202ENST00000343975 LMOD2Q6P5Q4 547 aa11.17□□□□□ -0.62
HMGCR-202ENST00000343975 LAMC1P11047 1609 aa11.17□□□□□ -0.62
HMGCR-202ENST00000343975 CNGB1Q14028 1251 aaPredicted RBP11.17□□□□□ -0.62
HMGCR-202ENST00000343975 ALKQ9UM73 1620 aa11.17□□□□□ -0.62
HMGCR-202ENST00000343975 GPRASP1Q5JY77 1395 aa11.16□□□□□ -0.62
HMGCR-202ENST00000343975 RBM33Q96EV2 1170 aaKnown RBP11.16□□□□□ -0.62
HMGCR-202ENST00000343975 CDK19Q9BWU1 502 aa11.16□□□□□ -0.62
HMGCR-202ENST00000343975 ADAMTS13Q76LX8 1427 aa11.16□□□□□ -0.62
HMGCR-202ENST00000343975 ATAD2Q6PL18 1390 aa11.16□□□□□ -0.62
HMGCR-202ENST00000343975 ESCO1Q5FWF5 840 aa11.15□□□□□ -0.62
HMGCR-202ENST00000343975 KNSTRNQ9Y448 316 aa11.15□□□□□ -0.62
HMGCR-202ENST00000343975 MED14O60244 1454 aa11.15□□□□□ -0.62
HMGCR-202ENST00000343975 UBAP1LF5GYI3 381 aa11.15□□□□□ -0.62
HMGCR-202ENST00000343975 WASLO00401 505 aaPredicted RBP11.15□□□□□ -0.62
HMGCR-202ENST00000343975 TMEM94Q12767 1356 aa11.15□□□□□ -0.62
HMGCR-202ENST00000343975 PPLO60437 1756 aa11.14□□□□□ -0.63
HMGCR-202ENST00000343975 CABP2Q9NPB3 220 aa11.14□□□□□ -0.63
HMGCR-202ENST00000343975 CCDC61Q9Y6R9 512 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms