RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 VGFO15240 615 aaPredicted RBP13.72□□□□□ -0.21
CLDN18-202ENST00000343735 MYOM2P54296 1465 aa13.72□□□□□ -0.21
CLDN18-202ENST00000343735 PRAG1Q86YV5 1406 aa13.72□□□□□ -0.21
CLDN18-202ENST00000343735 C3P01024 1663 aa13.71□□□□□ -0.21
CLDN18-202ENST00000343735 NBPF8Q3BBV2 869 aa13.71□□□□□ -0.21
CLDN18-202ENST00000343735 MADDQ8WXG6 1647 aa13.71□□□□□ -0.21
CLDN18-202ENST00000343735 KDM5AP29375 1690 aaKnown RBP13.7□□□□□ -0.22
CLDN18-202ENST00000343735 TMEM131LA2VDJ0 1609 aa13.7□□□□□ -0.22
CLDN18-202ENST00000343735 RALGAPBQ86X10 1494 aa13.7□□□□□ -0.22
CLDN18-202ENST00000343735 RIMS1Q86UR5 1692 aaKnown RBP13.69□□□□□ -0.22
CLDN18-202ENST00000343735 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.69□□□□□ -0.22
CLDN18-202ENST00000343735 ZFYVE9O95405 1425 aa13.69□□□□□ -0.22
CLDN18-202ENST00000343735 CEBPAP49715 358 aaPredicted RBP13.68□□□□□ -0.22
CLDN18-202ENST00000343735 EIF4G2P78344 907 aaKnown RBP eCLIP13.68□□□□□ -0.22
CLDN18-202ENST00000343735 A2ML1A8K2U0 1454 aa13.67□□□□□ -0.22
CLDN18-202ENST00000343735 ROCK2O75116 1388 aaKnown RBP13.67□□□□□ -0.22
CLDN18-202ENST00000343735 IFT172Q9UG01 1749 aa13.66□□□□□ -0.22
CLDN18-202ENST00000343735 NRXN1Q9ULB1 1477 aa13.66□□□□□ -0.22
CLDN18-202ENST00000343735 PPLO60437 1756 aa13.66□□□□□ -0.22
CLDN18-202ENST00000343735 CARD11Q9BXL7 1154 aa13.65□□□□□ -0.22
CLDN18-202ENST00000343735 NEXMIFQ5QGS0 1516 aa13.65□□□□□ -0.22
CLDN18-202ENST00000343735 THEMISQ8N1K5 641 aaPredicted RBP13.65□□□□□ -0.22
CLDN18-202ENST00000343735 KIAA1210Q9ULL0 1709 aa13.64□□□□□ -0.23
CLDN18-202ENST00000343735 GPRASP1Q5JY77 1395 aa13.64□□□□□ -0.23
CLDN18-202ENST00000343735 TRPM1Q7Z4N2 1603 aa13.64□□□□□ -0.23
CLDN18-202ENST00000343735 PLPPR3Q6T4P5 718 aa13.63□□□□□ -0.23
CLDN18-202ENST00000343735 PTPRMP28827 1452 aa13.63□□□□□ -0.23
CLDN18-202ENST00000343735 ADGRF5Q8IZF2 1346 aa13.63□□□□□ -0.23
CLDN18-202ENST00000343735 RIMS2Q9UQ26 1411 aa13.63□□□□□ -0.23
CLDN18-202ENST00000343735 LAMC1P11047 1609 aa13.63□□□□□ -0.23
CLDN18-202ENST00000343735 PIK3C2GO75747 1445 aa13.62□□□□□ -0.23
CLDN18-202ENST00000343735 C14orf93Q9H972 538 aaKnown RBP13.61□□□□□ -0.23
CLDN18-202ENST00000343735 EID1Q9Y6B2 187 aa13.61□□□□□ -0.23
CLDN18-202ENST00000343735 TMEM2Q9UHN6 1383 aa13.61□□□□□ -0.23
CLDN18-202ENST00000343735 UBR1Q8IWV7 1749 aa13.61□□□□□ -0.23
CLDN18-202ENST00000343735 SENP3Q9H4L4 574 aaPredicted RBP13.6□□□□□ -0.23
CLDN18-202ENST00000343735 MYO3AQ8NEV4 1616 aa13.6□□□□□ -0.23
CLDN18-202ENST00000343735 SETD1BQ9UPS6 1966 aaKnown RBP13.6□□□□□ -0.23
CLDN18-202ENST00000343735 HSPA5P11021 654 aaKnown RBP13.6□□□□□ -0.23
CLDN18-202ENST00000343735 USP47Q96K76 1375 aa13.6□□□□□ -0.23
CLDN18-202ENST00000343735 MYO5BQ9ULV0 1848 aa13.59□□□□□ -0.23
CLDN18-202ENST00000343735 SETBP1Q9Y6X0 1596 aa13.59□□□□□ -0.23
CLDN18-202ENST00000343735 EIF3AQ14152 1382 aaKnown RBP13.59□□□□□ -0.23
CLDN18-202ENST00000343735 DAXXQ9UER7 740 aaPredicted RBP13.58□□□□□ -0.23
CLDN18-202ENST00000343735 NBPF1Q3BBV0 1214 aa13.58□□□□□ -0.24
CLDN18-202ENST00000343735 CEP170BQ9Y4F5 1589 aaPredicted RBP13.58□□□□□ -0.24
CLDN18-202ENST00000343735 CFAP70Q5T0N1 1121 aa13.58□□□□□ -0.24
CLDN18-202ENST00000343735 SLIT1O75093 1534 aa13.57□□□□□ -0.24
CLDN18-202ENST00000343735 SCAF11Q99590 1463 aaKnown RBP13.57□□□□□ -0.24
CLDN18-202ENST00000343735 ZNF142P52746 1687 aaPredicted RBP13.56□□□□□ -0.24
CLDN18-202ENST00000343735 ARHGAP23Q9P227 1491 aa13.56□□□□□ -0.24
CLDN18-202ENST00000343735 NUTM2DQ5VT03 806 aaPredicted RBP13.56□□□□□ -0.24
CLDN18-202ENST00000343735 TXNDC2Q86VQ3 553 aa13.55□□□□□ -0.24
CLDN18-202ENST00000343735 BCL11AQ9H165 835 aa13.54□□□□□ -0.24
CLDN18-202ENST00000343735 PLEKHG1Q9ULL1 1385 aa13.54□□□□□ -0.24
CLDN18-202ENST00000343735 ANKLE2Q86XL3 938 aa13.53□□□□□ -0.24
CLDN18-202ENST00000343735 IRX6P78412 446 aaPredicted RBP13.52□□□□□ -0.24
CLDN18-202ENST00000343735 ST20-MTHFSA0A0A6YYL1 179 aa13.52□□□□□ -0.25
CLDN18-202ENST00000343735 KDM4FA0A1W2PPD8 638 aa13.52□□□□□ -0.25
CLDN18-202ENST00000343735 ALKQ9UM73 1620 aa13.51□□□□□ -0.25
CLDN18-202ENST00000343735 PRKCSHP14314 528 aaPredicted RBP13.51□□□□□ -0.25
CLDN18-202ENST00000343735 IQGAP1P46940 1657 aa13.51□□□□□ -0.25
CLDN18-202ENST00000343735 ADGRB1O14514 1584 aa13.5□□□□□ -0.25
CLDN18-202ENST00000343735 CDCA8Q53HL2 280 aa13.5□□□□□ -0.25
CLDN18-202ENST00000343735 LTKP29376 864 aa13.49□□□□□ -0.25
CLDN18-202ENST00000343735 TMF1P82094 1093 aa13.49□□□□□ -0.25
CLDN18-202ENST00000343735 TBX22Q9Y458 520 aa13.48□□□□□ -0.25
CLDN18-202ENST00000343735 DIP2AQ14689 1571 aa13.48□□□□□ -0.25
CLDN18-202ENST00000343735 TMEM132EQ6IEE7 984 aa13.48□□□□□ -0.25
CLDN18-202ENST00000343735 YTHDC2Q9H6S0 1430 aaKnown RBP13.47□□□□□ -0.25
CLDN18-202ENST00000343735 LRPPRCP42704 1394 aaKnown RBP13.47□□□□□ -0.25
CLDN18-202ENST00000343735 SBNO2Q9Y2G9 1366 aa13.47□□□□□ -0.25
CLDN18-202ENST00000343735 CENPJQ9HC77 1338 aaPredicted RBP13.47□□□□□ -0.25
CLDN18-202ENST00000343735 SIRT1Q96EB6 747 aa13.46□□□□□ -0.25
CLDN18-202ENST00000343735 TRAK1Q9UPV9 953 aa13.46□□□□□ -0.25
CLDN18-202ENST00000343735 ABCC11Q96J66 1382 aa13.46□□□□□ -0.26
CLDN18-202ENST00000343735 CCDC7Q96M83 1385 aa13.46□□□□□ -0.26
CLDN18-202ENST00000343735 PIK3R4Q99570 1358 aa13.45□□□□□ -0.26
CLDN18-202ENST00000343735 NRXN3Q9Y4C0 1643 aa13.45□□□□□ -0.26
CLDN18-202ENST00000343735 ADAMTS13Q76LX8 1427 aa13.44□□□□□ -0.26
CLDN18-202ENST00000343735 TESK2Q96S53 571 aa13.44□□□□□ -0.26
CLDN18-202ENST00000343735 DLC1Q96QB1 1528 aa13.44□□□□□ -0.26
CLDN18-202ENST00000343735 POLR1AO95602 1720 aaPredicted RBP13.44□□□□□ -0.26
CLDN18-202ENST00000343735 MED14O60244 1454 aa13.44□□□□□ -0.26
CLDN18-202ENST00000343735 WASHC2AQ641Q2 1341 aa13.44□□□□□ -0.26
CLDN18-202ENST00000343735 POGKQ9P215 609 aa13.43□□□□□ -0.26
CLDN18-202ENST00000343735 STK26Q9P289 416 aa13.43□□□□□ -0.26
CLDN18-202ENST00000343735 KIF7Q2M1P5 1343 aa13.43□□□□□ -0.26
CLDN18-202ENST00000343735 ASXL1Q8IXJ9 1541 aa13.43□□□□□ -0.26
CLDN18-202ENST00000343735 SETD1AO15047 1707 aaKnown RBP13.42□□□□□ -0.26
CLDN18-202ENST00000343735 PUS7Q96PZ0 661 aaKnown RBP13.42□□□□□ -0.26
CLDN18-202ENST00000343735 METP08581 1390 aa13.41□□□□□ -0.26
CLDN18-202ENST00000343735 TECPR2O15040 1411 aa13.41□□□□□ -0.26
CLDN18-202ENST00000343735 NPHP4O75161 1426 aaPredicted RBP13.41□□□□□ -0.26
CLDN18-202ENST00000343735 FAM135BQ49AJ0 1406 aa13.41□□□□□ -0.26
CLDN18-202ENST00000343735 SLC26A8Q96RN1 970 aa13.4□□□□□ -0.26
CLDN18-202ENST00000343735 SALL2Q9Y467 1007 aaPredicted RBP13.4□□□□□ -0.26
CLDN18-202ENST00000343735 C11orf95C9JLR9 678 aaPredicted RBP13.4□□□□□ -0.26
CLDN18-202ENST00000343735 ARHGEF28Q8N1W1 1705 aaKnown RBP13.39□□□□□ -0.27
CLDN18-202ENST00000343735 EVC2Q86UK5 1308 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms