RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 TMEM94Q12767 1356 aa27.85■■■□□ 2.05
CDHR4-201ENST00000343366 EFCAB6Q5THR3 1501 aa27.84■■■□□ 2.05
CDHR4-201ENST00000343366 POTEAQ6S8J7 498 aa27.84■■■□□ 2.05
CDHR4-201ENST00000343366 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.82■■■□□ 2.04
CDHR4-201ENST00000343366 EID1Q9Y6B2 187 aa27.81■■■□□ 2.04
CDHR4-201ENST00000343366 IQGAP3Q86VI3 1631 aa27.8■■■□□ 2.04
CDHR4-201ENST00000343366 NUP155O75694 1391 aa27.79■■■□□ 2.04
CDHR4-201ENST00000343366 KCNA6P17658 529 aa27.79■■■□□ 2.04
CDHR4-201ENST00000343366 NKTRP30414 1462 aaKnown RBP27.78■■■□□ 2.04
CDHR4-201ENST00000343366 RAB3GAP2Q9H2M9 1393 aa27.78■■■□□ 2.04
CDHR4-201ENST00000343366 NOS1P29475 1434 aa27.77■■■□□ 2.04
CDHR4-201ENST00000343366 IDI1Q13907 227 aa27.75■■■□□ 2.03
CDHR4-201ENST00000343366 ADGRB3O60242 1522 aa27.75■■■□□ 2.03
CDHR4-201ENST00000343366 TRIM52Q96A61 297 aa27.74■■■□□ 2.03
CDHR4-201ENST00000343366 SETD1AO15047 1707 aaKnown RBP27.74■■■□□ 2.03
CDHR4-201ENST00000343366 RPRD2Q5VT52 1461 aaKnown RBP27.7■■■□□ 2.03
CDHR4-201ENST00000343366 PHLPP1O60346 1717 aa27.7■■■□□ 2.03
CDHR4-201ENST00000343366 CHD2O14647 1828 aaKnown RBP27.7■■■□□ 2.02
CDHR4-201ENST00000343366 SLC26A8Q96RN1 970 aa27.68■■■□□ 2.02
CDHR4-201ENST00000343366 COL16A1Q07092 1604 aaPredicted RBP27.67■■■□□ 2.02
CDHR4-201ENST00000343366 PROSER2Q86WR7 435 aaPredicted RBP27.66■■■□□ 2.02
CDHR4-201ENST00000343366 RBM33Q96EV2 1170 aaKnown RBP27.66■■■□□ 2.02
CDHR4-201ENST00000343366 MYO5BQ9ULV0 1848 aa27.66■■■□□ 2.02
CDHR4-201ENST00000343366 ZFYVE9O95405 1425 aa27.66■■■□□ 2.02
CDHR4-201ENST00000343366 PCGF6Q9BYE7 350 aa27.64■■■□□ 2.02
CDHR4-201ENST00000343366 SLC4A1APQ9BWU0 796 aaKnown RBP27.63■■■□□ 2.01
CDHR4-201ENST00000343366 STAG3Q9UJ98 1225 aa27.63■■■□□ 2.01
CDHR4-201ENST00000343366 JCADQ9P266 1359 aa27.61■■■□□ 2.01
CDHR4-201ENST00000343366 MSH6P52701 1360 aa27.6■■■□□ 2.01
CDHR4-201ENST00000343366 E9PCH4 1651 aa27.59■■■□□ 2.01
CDHR4-201ENST00000343366 SLAIN2Q9P270 581 aa27.59■■■□□ 2.01
CDHR4-201ENST00000343366 MPHOSPH9Q99550 1183 aa27.58■■■□□ 2.01
CDHR4-201ENST00000343366 SLC52A1Q9NWF4 448 aa27.58■■■□□ 2.01
CDHR4-201ENST00000343366 TMEM131LA2VDJ0 1609 aa27.58■■■□□ 2.01
CDHR4-201ENST00000343366 LRP6O75581 1613 aa27.58■■■□□ 2.01
CDHR4-201ENST00000343366 PLEKHG1Q9ULL1 1385 aa27.58■■■□□ 2.01
CDHR4-201ENST00000343366 NCOA3Q9Y6Q9 1424 aa27.56■■■□□ 2
CDHR4-201ENST00000343366 AHDC1Q5TGY3 1603 aaPredicted RBP27.54■■■□□ 2
CDHR4-201ENST00000343366 SHPRHQ149N8 1683 aa27.53■■■□□ 2
CDHR4-201ENST00000343366 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.51■■□□□ 1.99
CDHR4-201ENST00000343366 SPHKAPQ2M3C7 1700 aa27.5■■□□□ 1.99
CDHR4-201ENST00000343366 RIMS2Q9UQ26 1411 aa27.5■■□□□ 1.99
CDHR4-201ENST00000343366 ADAMTS13Q76LX8 1427 aa27.49■■□□□ 1.99
CDHR4-201ENST00000343366 DIP2AQ14689 1571 aa27.48■■□□□ 1.99
CDHR4-201ENST00000343366 SPATA31A6Q5VVP1 1343 aa27.46■■□□□ 1.99
CDHR4-201ENST00000343366 TBX22Q9Y458 520 aa27.46■■□□□ 1.99
CDHR4-201ENST00000343366 TRPM2O94759 1503 aa27.43■■□□□ 1.98
CDHR4-201ENST00000343366 UPF1Q92900 1129 aaKnown RBP eCLIP27.42■■□□□ 1.98
CDHR4-201ENST00000343366 PIK3R4Q99570 1358 aa27.4■■□□□ 1.98
CDHR4-201ENST00000343366 BCANQ96GW7 911 aa27.37■■□□□ 1.97
CDHR4-201ENST00000343366 ZNF772Q68DY9 489 aaPredicted RBP27.36■■□□□ 1.97
CDHR4-201ENST00000343366 CDK12Q9NYV4 1490 aaPredicted RBP27.36■■□□□ 1.97
CDHR4-201ENST00000343366 C19orf44Q9H6X5 657 aa27.35■■□□□ 1.97
CDHR4-201ENST00000343366 CCDC144AA2RUR9 1427 aa27.34■■□□□ 1.97
CDHR4-201ENST00000343366 PTPRUQ92729 1446 aa27.34■■□□□ 1.97
CDHR4-201ENST00000343366 HDGFP51858 240 aaKnown RBP27.34■■□□□ 1.97
CDHR4-201ENST00000343366 CADPS2Q86UW7 1296 aa27.34■■□□□ 1.97
CDHR4-201ENST00000343366 XRN1Q8IZH2 1706 aaKnown RBP27.33■■□□□ 1.97
CDHR4-201ENST00000343366 SRCAPQ6ZRS2 3230 aa27.33■■□□□ 1.97
CDHR4-201ENST00000343366 NHSL1Q5SYE7 1610 aa27.33■■□□□ 1.97
CDHR4-201ENST00000343366 DHX57Q6P158 1386 aaKnown RBP27.33■■□□□ 1.97
CDHR4-201ENST00000343366 NRXN3Q9Y4C0 1643 aa27.32■■□□□ 1.96
CDHR4-201ENST00000343366 PPP1R15AO75807 674 aaPredicted RBP27.32■■□□□ 1.96
CDHR4-201ENST00000343366 FOXD1Q16676 465 aa27.32■■□□□ 1.96
CDHR4-201ENST00000343366 ANKRD30BQ9BXX2 1392 aa27.32■■□□□ 1.96
CDHR4-201ENST00000343366 DCCP43146 1447 aa27.32■■□□□ 1.96
CDHR4-201ENST00000343366 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.31■■□□□ 1.96
CDHR4-201ENST00000343366 KIF1BO60333 1816 aa27.31■■□□□ 1.96
CDHR4-201ENST00000343366 BRINP3Q76B58 766 aa27.3■■□□□ 1.96
CDHR4-201ENST00000343366 CLTCL1P53675 1640 aa27.28■■□□□ 1.96
CDHR4-201ENST00000343366 ASXL1Q8IXJ9 1541 aa27.28■■□□□ 1.96
CDHR4-201ENST00000343366 MEX3CQ5U5Q3 659 aaKnown RBP27.25■■□□□ 1.95
CDHR4-201ENST00000343366 SETBP1Q9Y6X0 1596 aa27.25■■□□□ 1.95
CDHR4-201ENST00000343366 ATF3P18847 181 aa27.24■■□□□ 1.95
CDHR4-201ENST00000343366 MST1RQ04912 1400 aa27.24■■□□□ 1.95
CDHR4-201ENST00000343366 CLSPNQ9HAW4 1339 aa27.23■■□□□ 1.95
CDHR4-201ENST00000343366 RXRBP28702 533 aa27.23■■□□□ 1.95
CDHR4-201ENST00000343366 NUTM2DQ5VT03 806 aaPredicted RBP27.22■■□□□ 1.95
CDHR4-201ENST00000343366 C14orf37Q86TY3 774 aa27.22■■□□□ 1.95
CDHR4-201ENST00000343366 AMOTL2Q9Y2J4 779 aa27.21■■□□□ 1.95
CDHR4-201ENST00000343366 CHGAP10645 457 aaKnown RBP27.19■■□□□ 1.94
CDHR4-201ENST00000343366 AFF2P51816 1311 aa27.17■■□□□ 1.94
CDHR4-201ENST00000343366 RGS12O14924 1447 aa27.17■■□□□ 1.94
CDHR4-201ENST00000343366 LAMC1P11047 1609 aa27.17■■□□□ 1.94
CDHR4-201ENST00000343366 RPGRIP1LQ68CZ1 1315 aa27.16■■□□□ 1.94
CDHR4-201ENST00000343366 NALCNQ8IZF0 1738 aa27.15■■□□□ 1.94
CDHR4-201ENST00000343366 PNPLA6Q8IY17 1366 aa27.12■■□□□ 1.93
CDHR4-201ENST00000343366 NUTM2BA6NNL0 878 aaPredicted RBP27.12■■□□□ 1.93
CDHR4-201ENST00000343366 NUTM2EB1AL46 878 aaPredicted RBP27.12■■□□□ 1.93
CDHR4-201ENST00000343366 ZNF326Q5BKZ1 582 aaKnown RBP27.12■■□□□ 1.93
CDHR4-201ENST00000343366 NUTM2AQ8IVF1 878 aaPredicted RBP27.12■■□□□ 1.93
CDHR4-201ENST00000343366 STAC3Q96MF2 364 aa27.12■■□□□ 1.93
CDHR4-201ENST00000343366 SPATA31E1Q6ZUB1 1445 aa27.12■■□□□ 1.93
CDHR4-201ENST00000343366 ADGRL3Q9HAR2 1447 aa27.11■■□□□ 1.93
CDHR4-201ENST00000343366 METP08581 1390 aa27.1■■□□□ 1.93
CDHR4-201ENST00000343366 EP400Q96L91 3159 aa27.09■■□□□ 1.93
CDHR4-201ENST00000343366 CCER1Q8TC90 406 aaPredicted RBP27.09■■□□□ 1.93
CDHR4-201ENST00000343366 LRRC59Q96AG4 307 aaKnown RBP27.08■■□□□ 1.93
CDHR4-201ENST00000343366 VGFO15240 615 aaPredicted RBP27.06■■□□□ 1.92
CDHR4-201ENST00000343366 RBM6P78332 1123 aaKnown RBP27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms