RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 TMEM94Q12767 1356 aa27.85■■■□□ 2.05
CDHR4-201ENST00000343366 EFCAB6Q5THR3 1501 aa27.84■■■□□ 2.05
CDHR4-201ENST00000343366 POTEAQ6S8J7 498 aa27.84■■■□□ 2.05
CDHR4-201ENST00000343366 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.82■■■□□ 2.04
CDHR4-201ENST00000343366 EID1Q9Y6B2 187 aa27.81■■■□□ 2.04
CDHR4-201ENST00000343366 IQGAP3Q86VI3 1631 aa27.8■■■□□ 2.04
CDHR4-201ENST00000343366 NUP155O75694 1391 aa27.79■■■□□ 2.04
CDHR4-201ENST00000343366 KCNA6P17658 529 aa27.79■■■□□ 2.04
CDHR4-201ENST00000343366 NKTRP30414 1462 aaKnown RBP27.78■■■□□ 2.04
CDHR4-201ENST00000343366 RAB3GAP2Q9H2M9 1393 aa27.78■■■□□ 2.04
CDHR4-201ENST00000343366 NOS1P29475 1434 aa27.77■■■□□ 2.04
CDHR4-201ENST00000343366 IDI1Q13907 227 aa27.75■■■□□ 2.03
CDHR4-201ENST00000343366 ADGRB3O60242 1522 aa27.75■■■□□ 2.03
CDHR4-201ENST00000343366 TRIM52Q96A61 297 aa27.74■■■□□ 2.03
CDHR4-201ENST00000343366 SETD1AO15047 1707 aaKnown RBP27.74■■■□□ 2.03
CDHR4-201ENST00000343366 RPRD2Q5VT52 1461 aaKnown RBP27.7■■■□□ 2.03
CDHR4-201ENST00000343366 PHLPP1O60346 1717 aa27.7■■■□□ 2.03
CDHR4-201ENST00000343366 CHD2O14647 1828 aaKnown RBP27.7■■■□□ 2.02
CDHR4-201ENST00000343366 SLC26A8Q96RN1 970 aa27.68■■■□□ 2.02
CDHR4-201ENST00000343366 COL16A1Q07092 1604 aaPredicted RBP27.67■■■□□ 2.02
CDHR4-201ENST00000343366 PROSER2Q86WR7 435 aaPredicted RBP27.66■■■□□ 2.02
CDHR4-201ENST00000343366 RBM33Q96EV2 1170 aaKnown RBP27.66■■■□□ 2.02
CDHR4-201ENST00000343366 MYO5BQ9ULV0 1848 aa27.66■■■□□ 2.02
CDHR4-201ENST00000343366 ZFYVE9O95405 1425 aa27.66■■■□□ 2.02
CDHR4-201ENST00000343366 PCGF6Q9BYE7 350 aa27.64■■■□□ 2.02
CDHR4-201ENST00000343366 SLC4A1APQ9BWU0 796 aaKnown RBP27.63■■■□□ 2.01
CDHR4-201ENST00000343366 STAG3Q9UJ98 1225 aa27.63■■■□□ 2.01
CDHR4-201ENST00000343366 JCADQ9P266 1359 aa27.61■■■□□ 2.01
CDHR4-201ENST00000343366 MSH6P52701 1360 aa27.6■■■□□ 2.01
CDHR4-201ENST00000343366 E9PCH4 1651 aa27.59■■■□□ 2.01
CDHR4-201ENST00000343366 SLAIN2Q9P270 581 aa27.59■■■□□ 2.01
CDHR4-201ENST00000343366 MPHOSPH9Q99550 1183 aa27.58■■■□□ 2.01
CDHR4-201ENST00000343366 SLC52A1Q9NWF4 448 aa27.58■■■□□ 2.01
CDHR4-201ENST00000343366 TMEM131LA2VDJ0 1609 aa27.58■■■□□ 2.01
CDHR4-201ENST00000343366 LRP6O75581 1613 aa27.58■■■□□ 2.01
CDHR4-201ENST00000343366 PLEKHG1Q9ULL1 1385 aa27.58■■■□□ 2.01
CDHR4-201ENST00000343366 NCOA3Q9Y6Q9 1424 aa27.56■■■□□ 2
CDHR4-201ENST00000343366 AHDC1Q5TGY3 1603 aaPredicted RBP27.54■■■□□ 2
CDHR4-201ENST00000343366 SHPRHQ149N8 1683 aa27.53■■■□□ 2
CDHR4-201ENST00000343366 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.51■■□□□ 1.99
CDHR4-201ENST00000343366 SPHKAPQ2M3C7 1700 aa27.5■■□□□ 1.99
CDHR4-201ENST00000343366 RIMS2Q9UQ26 1411 aa27.5■■□□□ 1.99
CDHR4-201ENST00000343366 ADAMTS13Q76LX8 1427 aa27.49■■□□□ 1.99
CDHR4-201ENST00000343366 DIP2AQ14689 1571 aa27.48■■□□□ 1.99
CDHR4-201ENST00000343366 SPATA31A6Q5VVP1 1343 aa27.46■■□□□ 1.99
CDHR4-201ENST00000343366 TBX22Q9Y458 520 aa27.46■■□□□ 1.99
CDHR4-201ENST00000343366 TRPM2O94759 1503 aa27.43■■□□□ 1.98
CDHR4-201ENST00000343366 UPF1Q92900 1129 aaKnown RBP eCLIP27.42■■□□□ 1.98
CDHR4-201ENST00000343366 PIK3R4Q99570 1358 aa27.4■■□□□ 1.98
CDHR4-201ENST00000343366 BCANQ96GW7 911 aa27.37■■□□□ 1.97
CDHR4-201ENST00000343366 ZNF772Q68DY9 489 aaPredicted RBP27.36■■□□□ 1.97
CDHR4-201ENST00000343366 CDK12Q9NYV4 1490 aaPredicted RBP27.36■■□□□ 1.97
CDHR4-201ENST00000343366 C19orf44Q9H6X5 657 aa27.35■■□□□ 1.97
CDHR4-201ENST00000343366 CCDC144AA2RUR9 1427 aa27.34■■□□□ 1.97
CDHR4-201ENST00000343366 PTPRUQ92729 1446 aa27.34■■□□□ 1.97
CDHR4-201ENST00000343366 HDGFP51858 240 aaKnown RBP27.34■■□□□ 1.97
CDHR4-201ENST00000343366 CADPS2Q86UW7 1296 aa27.34■■□□□ 1.97
CDHR4-201ENST00000343366 XRN1Q8IZH2 1706 aaKnown RBP27.33■■□□□ 1.97
CDHR4-201ENST00000343366 SRCAPQ6ZRS2 3230 aa27.33■■□□□ 1.97
CDHR4-201ENST00000343366 NHSL1Q5SYE7 1610 aa27.33■■□□□ 1.97
CDHR4-201ENST00000343366 DHX57Q6P158 1386 aaKnown RBP27.33■■□□□ 1.97
CDHR4-201ENST00000343366 NRXN3Q9Y4C0 1643 aa27.32■■□□□ 1.96
CDHR4-201ENST00000343366 PPP1R15AO75807 674 aaPredicted RBP27.32■■□□□ 1.96
CDHR4-201ENST00000343366 FOXD1Q16676 465 aa27.32■■□□□ 1.96
CDHR4-201ENST00000343366 ANKRD30BQ9BXX2 1392 aa27.32■■□□□ 1.96
CDHR4-201ENST00000343366 DCCP43146 1447 aa27.32■■□□□ 1.96
CDHR4-201ENST00000343366 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.31■■□□□ 1.96
CDHR4-201ENST00000343366 KIF1BO60333 1816 aa27.31■■□□□ 1.96
CDHR4-201ENST00000343366 BRINP3Q76B58 766 aa27.3■■□□□ 1.96
CDHR4-201ENST00000343366 CLTCL1P53675 1640 aa27.28■■□□□ 1.96
CDHR4-201ENST00000343366 ASXL1Q8IXJ9 1541 aa27.28■■□□□ 1.96
CDHR4-201ENST00000343366 MEX3CQ5U5Q3 659 aaKnown RBP27.25■■□□□ 1.95
CDHR4-201ENST00000343366 SETBP1Q9Y6X0 1596 aa27.25■■□□□ 1.95
CDHR4-201ENST00000343366 ATF3P18847 181 aa27.24■■□□□ 1.95
CDHR4-201ENST00000343366 MST1RQ04912 1400 aa27.24■■□□□ 1.95
CDHR4-201ENST00000343366 CLSPNQ9HAW4 1339 aa27.23■■□□□ 1.95
CDHR4-201ENST00000343366 RXRBP28702 533 aa27.23■■□□□ 1.95
CDHR4-201ENST00000343366 NUTM2DQ5VT03 806 aaPredicted RBP27.22■■□□□ 1.95
CDHR4-201ENST00000343366 C14orf37Q86TY3 774 aa27.22■■□□□ 1.95
CDHR4-201ENST00000343366 AMOTL2Q9Y2J4 779 aa27.21■■□□□ 1.95
CDHR4-201ENST00000343366 CHGAP10645 457 aaKnown RBP27.19■■□□□ 1.94
CDHR4-201ENST00000343366 AFF2P51816 1311 aa27.17■■□□□ 1.94
CDHR4-201ENST00000343366 RGS12O14924 1447 aa27.17■■□□□ 1.94
CDHR4-201ENST00000343366 LAMC1P11047 1609 aa27.17■■□□□ 1.94
CDHR4-201ENST00000343366 RPGRIP1LQ68CZ1 1315 aa27.16■■□□□ 1.94
CDHR4-201ENST00000343366 NALCNQ8IZF0 1738 aa27.15■■□□□ 1.94
CDHR4-201ENST00000343366 PNPLA6Q8IY17 1366 aa27.12■■□□□ 1.93
CDHR4-201ENST00000343366 NUTM2BA6NNL0 878 aaPredicted RBP27.12■■□□□ 1.93
CDHR4-201ENST00000343366 NUTM2EB1AL46 878 aaPredicted RBP27.12■■□□□ 1.93
CDHR4-201ENST00000343366 ZNF326Q5BKZ1 582 aaKnown RBP27.12■■□□□ 1.93
CDHR4-201ENST00000343366 NUTM2AQ8IVF1 878 aaPredicted RBP27.12■■□□□ 1.93
CDHR4-201ENST00000343366 STAC3Q96MF2 364 aa27.12■■□□□ 1.93
CDHR4-201ENST00000343366 SPATA31E1Q6ZUB1 1445 aa27.12■■□□□ 1.93
CDHR4-201ENST00000343366 ADGRL3Q9HAR2 1447 aa27.11■■□□□ 1.93
CDHR4-201ENST00000343366 METP08581 1390 aa27.1■■□□□ 1.93
CDHR4-201ENST00000343366 EP400Q96L91 3159 aa27.09■■□□□ 1.93
CDHR4-201ENST00000343366 CCER1Q8TC90 406 aaPredicted RBP27.09■■□□□ 1.93
CDHR4-201ENST00000343366 LRRC59Q96AG4 307 aaKnown RBP27.08■■□□□ 1.93
CDHR4-201ENST00000343366 VGFO15240 615 aaPredicted RBP27.06■■□□□ 1.92
CDHR4-201ENST00000343366 RBM6P78332 1123 aaKnown RBP27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms