RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 ZNF772Q68DY9 489 aaPredicted RBP28.08■■■□□ 2.09
MUC1-204ENST00000343256 SPATA31A6Q5VVP1 1343 aa28.06■■■□□ 2.08
MUC1-204ENST00000343256 LMTK2Q8IWU2 1503 aa28.06■■■□□ 2.08
MUC1-204ENST00000343256 CHD2O14647 1828 aaKnown RBP28.05■■■□□ 2.08
MUC1-204ENST00000343256 NOS1P29475 1434 aa28.05■■■□□ 2.08
MUC1-204ENST00000343256 VPS8Q8N3P4 1428 aa28.04■■■□□ 2.08
MUC1-204ENST00000343256 FGD6Q6ZV73 1430 aa28.03■■■□□ 2.08
MUC1-204ENST00000343256 C14orf37Q86TY3 774 aa28■■■□□ 2.07
MUC1-204ENST00000343256 DAPK1P53355 1430 aa28■■■□□ 2.07
MUC1-204ENST00000343256 RXRBP28702 533 aa27.99■■■□□ 2.07
MUC1-204ENST00000343256 CHIC2Q9UKJ5 165 aa27.99■■■□□ 2.07
MUC1-204ENST00000343256 MYO5BQ9ULV0 1848 aa27.99■■■□□ 2.07
MUC1-204ENST00000343256 PLEKHG1Q9ULL1 1385 aa27.99■■■□□ 2.07
MUC1-204ENST00000343256 SLC52A1Q9NWF4 448 aa27.98■■■□□ 2.07
MUC1-204ENST00000343256 PTPN23Q9H3S7 1636 aa27.98■■■□□ 2.07
MUC1-204ENST00000343256 ZFYVE9O95405 1425 aa27.98■■■□□ 2.07
MUC1-204ENST00000343256 SHPRHQ149N8 1683 aa27.97■■■□□ 2.07
MUC1-204ENST00000343256 PPP1R15AO75807 674 aaPredicted RBP27.97■■■□□ 2.07
MUC1-204ENST00000343256 AHDC1Q5TGY3 1603 aaPredicted RBP27.96■■■□□ 2.07
MUC1-204ENST00000343256 NUTM2BA6NNL0 878 aaPredicted RBP27.96■■■□□ 2.07
MUC1-204ENST00000343256 NUTM2EB1AL46 878 aaPredicted RBP27.96■■■□□ 2.07
MUC1-204ENST00000343256 NUTM2AQ8IVF1 878 aaPredicted RBP27.96■■■□□ 2.07
MUC1-204ENST00000343256 RIMS2Q9UQ26 1411 aa27.94■■■□□ 2.06
MUC1-204ENST00000343256 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.94■■■□□ 2.06
MUC1-204ENST00000343256 GCC2Q8IWJ2 1684 aa27.92■■■□□ 2.06
MUC1-204ENST00000343256 NCOA3Q9Y6Q9 1424 aa27.92■■■□□ 2.06
MUC1-204ENST00000343256 ANKRD30AQ9BXX3 1397 aa27.91■■■□□ 2.06
MUC1-204ENST00000343256 CADPS2Q86UW7 1296 aa27.91■■■□□ 2.06
MUC1-204ENST00000343256 ATF3P18847 181 aa27.9■■■□□ 2.06
MUC1-204ENST00000343256 TBX22Q9Y458 520 aa27.9■■■□□ 2.06
MUC1-204ENST00000343256 NUTM2DQ5VT03 806 aaPredicted RBP27.89■■■□□ 2.06
MUC1-204ENST00000343256 DIP2AQ14689 1571 aa27.88■■■□□ 2.05
MUC1-204ENST00000343256 C19orf44Q9H6X5 657 aa27.88■■■□□ 2.05
MUC1-204ENST00000343256 CDK12Q9NYV4 1490 aaPredicted RBP27.88■■■□□ 2.05
MUC1-204ENST00000343256 AFF2P51816 1311 aa27.88■■■□□ 2.05
MUC1-204ENST00000343256 TMEM131LA2VDJ0 1609 aa27.86■■■□□ 2.05
MUC1-204ENST00000343256 HDGFP51858 240 aaKnown RBP27.86■■■□□ 2.05
MUC1-204ENST00000343256 BRINP3Q76B58 766 aa27.86■■■□□ 2.05
MUC1-204ENST00000343256 ADAMTS13Q76LX8 1427 aa27.85■■■□□ 2.05
MUC1-204ENST00000343256 CHGAP10645 457 aaKnown RBP27.85■■■□□ 2.05
MUC1-204ENST00000343256 RPRD2Q5VT52 1461 aaKnown RBP27.82■■■□□ 2.04
MUC1-204ENST00000343256 RGS12O14924 1447 aa27.81■■■□□ 2.04
MUC1-204ENST00000343256 LOC105371045A0A1W2PR82 267 aa27.78■■■□□ 2.04
MUC1-204ENST00000343256 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.78■■■□□ 2.04
MUC1-204ENST00000343256 C8orf37Q96NL8 207 aa27.77■■■□□ 2.04
MUC1-204ENST00000343256 AMOTL2Q9Y2J4 779 aa27.77■■■□□ 2.04
MUC1-204ENST00000343256 ASXL1Q8IXJ9 1541 aa27.76■■■□□ 2.03
MUC1-204ENST00000343256 PTPRUQ92729 1446 aa27.75■■■□□ 2.03
MUC1-204ENST00000343256 PIK3R4Q99570 1358 aa27.75■■■□□ 2.03
MUC1-204ENST00000343256 QTRT2Q9H974 415 aaKnown RBP27.75■■■□□ 2.03
MUC1-204ENST00000343256 SETD5Q9C0A6 1442 aa27.74■■■□□ 2.03
MUC1-204ENST00000343256 SRCAPQ6ZRS2 3230 aa27.73■■■□□ 2.03
MUC1-204ENST00000343256 ADGRL2O95490 1459 aa27.72■■■□□ 2.03
MUC1-204ENST00000343256 RBM6P78332 1123 aaKnown RBP27.72■■■□□ 2.03
MUC1-204ENST00000343256 DDX17Q92841 729 aaKnown RBP27.71■■■□□ 2.03
MUC1-204ENST00000343256 ANKRD50Q9ULJ7 1429 aa27.71■■■□□ 2.03
MUC1-204ENST00000343256 TRPM2O94759 1503 aa27.71■■■□□ 2.03
MUC1-204ENST00000343256 NHSL1Q5SYE7 1610 aa27.7■■■□□ 2.03
MUC1-204ENST00000343256 MST1RQ04912 1400 aa27.69■■■□□ 2.02
MUC1-204ENST00000343256 LRRC59Q96AG4 307 aaKnown RBP27.68■■■□□ 2.02
MUC1-204ENST00000343256 DCCP43146 1447 aa27.67■■■□□ 2.02
MUC1-204ENST00000343256 APLP2Q06481 763 aa27.67■■■□□ 2.02
MUC1-204ENST00000343256 PNPLA6Q8IY17 1366 aa27.66■■■□□ 2.02
MUC1-204ENST00000343256 UNC13BO14795 1591 aa27.65■■■□□ 2.02
MUC1-204ENST00000343256 E9PCH4 1651 aa27.65■■■□□ 2.02
MUC1-204ENST00000343256 ADAMTS2O95450 1211 aa27.63■■■□□ 2.01
MUC1-204ENST00000343256 XRN1Q8IZH2 1706 aaKnown RBP27.62■■■□□ 2.01
MUC1-204ENST00000343256 FAM50AQ14320 339 aaKnown RBP27.61■■■□□ 2.01
MUC1-204ENST00000343256 NGLY1Q96IV0 654 aa27.61■■■□□ 2.01
MUC1-204ENST00000343256 NRXN3Q9Y4C0 1643 aa27.59■■■□□ 2.01
MUC1-204ENST00000343256 ATAD2Q6PL18 1390 aa27.59■■■□□ 2.01
MUC1-204ENST00000343256 ZRANB1Q9UGI0 708 aa27.54■■■□□ 2
MUC1-204ENST00000343256 SETBP1Q9Y6X0 1596 aa27.53■■■□□ 2
MUC1-204ENST00000343256 METP08581 1390 aa27.53■■■□□ 2
MUC1-204ENST00000343256 USP21Q9UK80 565 aa27.53■■■□□ 2
MUC1-204ENST00000343256 ADGRL3Q9HAR2 1447 aa27.52■■■□□ 2
MUC1-204ENST00000343256 NALCNQ8IZF0 1738 aa27.51■■□□□ 1.99
MUC1-204ENST00000343256 IQGAP3Q86VI3 1631 aa27.49■■□□□ 1.99
MUC1-204ENST00000343256 TRPC5Q9UL62 973 aaPredicted RBP27.48■■□□□ 1.99
MUC1-204ENST00000343256 C1orf167Q5SNV9 1468 aa27.46■■□□□ 1.99
MUC1-204ENST00000343256 FOXD1Q16676 465 aa27.45■■□□□ 1.98
MUC1-204ENST00000343256 ZNF326Q5BKZ1 582 aaKnown RBP27.45■■□□□ 1.98
MUC1-204ENST00000343256 ORAI2Q96SN7 254 aa27.43■■□□□ 1.98
MUC1-204ENST00000343256 ATRNO75882 1429 aa27.42■■□□□ 1.98
MUC1-204ENST00000343256 FNBP4Q8N3X1 1017 aaPredicted RBP27.42■■□□□ 1.98
MUC1-204ENST00000343256 NUP155O75694 1391 aa27.42■■□□□ 1.98
MUC1-204ENST00000343256 SOS2Q07890 1332 aaPredicted RBP27.41■■□□□ 1.98
MUC1-204ENST00000343256 LAMC1P11047 1609 aa27.4■■□□□ 1.98
MUC1-204ENST00000343256 PTCH1Q13635 1447 aa27.39■■□□□ 1.97
MUC1-204ENST00000343256 EP400Q96L91 3159 aa27.38■■□□□ 1.97
MUC1-204ENST00000343256 SPHKAPQ2M3C7 1700 aa27.35■■□□□ 1.97
MUC1-204ENST00000343256 CCDC125Q86Z20 511 aa27.34■■□□□ 1.97
MUC1-204ENST00000343256 NEXMIFQ5QGS0 1516 aa27.32■■□□□ 1.96
MUC1-204ENST00000343256 COL22A1Q8NFW1 1626 aaPredicted RBP27.32■■□□□ 1.96
MUC1-204ENST00000343256 BCL9LQ86UU0 1499 aa27.32■■□□□ 1.96
MUC1-204ENST00000343256 ROCK1Q13464 1354 aa27.31■■□□□ 1.96
MUC1-204ENST00000343256 ROBO2Q9HCK4 1378 aa27.3■■□□□ 1.96
MUC1-204ENST00000343256 MYOM2P54296 1465 aa27.29■■□□□ 1.96
MUC1-204ENST00000343256 GJD4Q96KN9 370 aaPredicted RBP27.27■■□□□ 1.96
MUC1-204ENST00000343256 CLTCL1P53675 1640 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms