RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 NRXN3Q9Y4C0 1643 aa11.39□□□□□ -0.59
CFAP54-201ENST00000342887 PIK3C2GO75747 1445 aa11.39□□□□□ -0.59
CFAP54-201ENST00000342887 SLC4A1APQ9BWU0 796 aaKnown RBP11.38□□□□□ -0.59
CFAP54-201ENST00000342887 SCAF11Q99590 1463 aaKnown RBP11.38□□□□□ -0.59
CFAP54-201ENST00000342887 ASXL2Q76L83 1435 aa11.37□□□□□ -0.59
CFAP54-201ENST00000342887 DIP2BQ9P265 1576 aa11.37□□□□□ -0.59
CFAP54-201ENST00000342887 ANP32CO43423 234 aa11.37□□□□□ -0.59
CFAP54-201ENST00000342887 CDC42BPGQ6DT37 1551 aa11.37□□□□□ -0.59
CFAP54-201ENST00000342887 DISP3Q9P2K9 1392 aa11.37□□□□□ -0.59
CFAP54-201ENST00000342887 IQSEC2Q5JU85 1478 aa11.36□□□□□ -0.59
CFAP54-201ENST00000342887 AGLP35573 1532 aa11.36□□□□□ -0.59
CFAP54-201ENST00000342887 ZFYVE9O95405 1425 aa11.36□□□□□ -0.59
CFAP54-201ENST00000342887 USP54Q70EL1 1684 aa11.36□□□□□ -0.59
CFAP54-201ENST00000342887 RIMS1Q86UR5 1692 aaKnown RBP11.36□□□□□ -0.59
CFAP54-201ENST00000342887 STAC3Q96MF2 364 aa11.36□□□□□ -0.59
CFAP54-201ENST00000342887 YTHDC1Q96MU7 727 aaKnown RBP11.35□□□□□ -0.59
CFAP54-201ENST00000342887 PNISRQ8TF01 805 aaKnown RBP11.35□□□□□ -0.59
CFAP54-201ENST00000342887 ATP1B4Q9UN42 357 aaPredicted RBP11.34□□□□□ -0.59
CFAP54-201ENST00000342887 ADGRL1O94910 1474 aa11.34□□□□□ -0.59
CFAP54-201ENST00000342887 HNRNPMP52272 730 aaKnown RBP eCLIP11.34□□□□□ -0.59
CFAP54-201ENST00000342887 HIRIP3Q9BW71 556 aaPredicted RBP11.34□□□□□ -0.59
CFAP54-201ENST00000342887 KIF20BQ96Q89 1820 aa11.33□□□□□ -0.6
CFAP54-201ENST00000342887 TOPAZ1Q8N9V7 1692 aa11.32□□□□□ -0.6
CFAP54-201ENST00000342887 SPATA31D1Q6ZQQ2 1576 aa11.32□□□□□ -0.6
CFAP54-201ENST00000342887 NRKQ7Z2Y5 1582 aa11.31□□□□□ -0.6
CFAP54-201ENST00000342887 TULP4Q9NRJ4 1543 aa11.31□□□□□ -0.6
CFAP54-201ENST00000342887 ZNF521Q96K83 1311 aa11.31□□□□□ -0.6
CFAP54-201ENST00000342887 AKAP12Q02952 1782 aa11.31□□□□□ -0.6
CFAP54-201ENST00000342887 NPATQ14207 1427 aa11.3□□□□□ -0.6
CFAP54-201ENST00000342887 MON2Q7Z3U7 1717 aa11.29□□□□□ -0.6
CFAP54-201ENST00000342887 NLRP1Q9C000 1473 aa11.29□□□□□ -0.6
CFAP54-201ENST00000342887 NALCNQ8IZF0 1738 aa11.28□□□□□ -0.6
CFAP54-201ENST00000342887 DLC1Q96QB1 1528 aa11.28□□□□□ -0.6
CFAP54-201ENST00000342887 COL3A1P02461 1466 aaPredicted RBP11.27□□□□□ -0.6
CFAP54-201ENST00000342887 MED14O60244 1454 aa11.27□□□□□ -0.61
CFAP54-201ENST00000342887 TRIM52Q96A61 297 aa11.25□□□□□ -0.61
CFAP54-201ENST00000342887 MYBBP1AQ9BQG0 1328 aaKnown RBP11.25□□□□□ -0.61
CFAP54-201ENST00000342887 MARF1Q9Y4F3 1742 aaKnown RBP11.25□□□□□ -0.61
CFAP54-201ENST00000342887 PTPRMP28827 1452 aa11.24□□□□□ -0.61
CFAP54-201ENST00000342887 RALBP1Q15311 655 aa11.24□□□□□ -0.61
CFAP54-201ENST00000342887 CD163L1Q9NR16 1453 aa11.24□□□□□ -0.61
CFAP54-201ENST00000342887 ARHGEF40Q8TER5 1519 aa11.23□□□□□ -0.61
CFAP54-201ENST00000342887 FANCIQ9NVI1 1328 aa11.23□□□□□ -0.61
CFAP54-201ENST00000342887 TRMT2AQ8IZ69 625 aaKnown RBP11.23□□□□□ -0.61
CFAP54-201ENST00000342887 N4BP2Q86UW6 1770 aaPredicted RBP11.23□□□□□ -0.61
CFAP54-201ENST00000342887 RGPD1P0DJD0 1748 aa11.22□□□□□ -0.61
CFAP54-201ENST00000342887 C3P01024 1663 aa11.22□□□□□ -0.61
CFAP54-201ENST00000342887 TSPY4P0CV99 314 aa11.22□□□□□ -0.61
CFAP54-201ENST00000342887 TSPY10P0CW01 314 aa11.22□□□□□ -0.61
CFAP54-201ENST00000342887 EFCAB2Q5VUJ9 269 aa11.21□□□□□ -0.62
CFAP54-201ENST00000342887 ST20-MTHFSA0A0A6YYL1 179 aa11.2□□□□□ -0.62
CFAP54-201ENST00000342887 NBPF1Q3BBV0 1214 aa11.2□□□□□ -0.62
CFAP54-201ENST00000342887 AMER1Q5JTC6 1135 aaPredicted RBP11.2□□□□□ -0.62
CFAP54-201ENST00000342887 UBR1Q8IWV7 1749 aa11.19□□□□□ -0.62
CFAP54-201ENST00000342887 ARID3CA6NKF2 412 aa11.19□□□□□ -0.62
CFAP54-201ENST00000342887 PUS7Q96PZ0 661 aaKnown RBP11.19□□□□□ -0.62
CFAP54-201ENST00000342887 CPS1P31327 1500 aa11.18□□□□□ -0.62
CFAP54-201ENST00000342887 NCBP3Q53F19 620 aaKnown RBP11.18□□□□□ -0.62
CFAP54-201ENST00000342887 NUDCQ9Y266 331 aa11.17□□□□□ -0.62
CFAP54-201ENST00000342887 PHF23Q9BUL5 403 aaPredicted RBP11.16□□□□□ -0.62
CFAP54-201ENST00000342887 KANK1Q14678 1352 aa11.16□□□□□ -0.62
CFAP54-201ENST00000342887 LRRC7Q96NW7 1537 aa11.16□□□□□ -0.62
CFAP54-201ENST00000342887 ALKQ9UM73 1620 aa11.16□□□□□ -0.62
CFAP54-201ENST00000342887 FKBP8Q14318 412 aa11.15□□□□□ -0.62
CFAP54-201ENST00000342887 ERICH6Q7L0X2 663 aa11.15□□□□□ -0.62
CFAP54-201ENST00000342887 TUBGCP6Q96RT7 1819 aa11.14□□□□□ -0.63
CFAP54-201ENST00000342887 ANO8Q9HCE9 1232 aaPredicted RBP11.14□□□□□ -0.63
CFAP54-201ENST00000342887 CARD11Q9BXL7 1154 aa11.13□□□□□ -0.63
CFAP54-201ENST00000342887 POLR3AO14802 1390 aaPredicted RBP11.13□□□□□ -0.63
CFAP54-201ENST00000342887 MSH5O43196 834 aa11.13□□□□□ -0.63
CFAP54-201ENST00000342887 CD109Q6YHK3 1445 aa11.13□□□□□ -0.63
CFAP54-201ENST00000342887 PPP4R2Q9NY27 417 aa11.12□□□□□ -0.63
CFAP54-201ENST00000342887 SPAG9O60271 1321 aaKnown RBP11.12□□□□□ -0.63
CFAP54-201ENST00000342887 DCAF11Q8TEB1 546 aa11.12□□□□□ -0.63
CFAP54-201ENST00000342887 DLG5Q8TDM6 1919 aa11.12□□□□□ -0.63
CFAP54-201ENST00000342887 PDE3BQ13370 1112 aa11.11□□□□□ -0.63
CFAP54-201ENST00000342887 NLRP13Q86W25 1043 aa11.11□□□□□ -0.63
CFAP54-201ENST00000342887 ZNF777Q9ULD5 760 aaPredicted RBP11.11□□□□□ -0.63
CFAP54-201ENST00000342887 PLEKHH1Q9ULM0 1364 aa11.11□□□□□ -0.63
CFAP54-201ENST00000342887 RBM19Q9Y4C8 960 aaKnown RBP11.1□□□□□ -0.63
CFAP54-201ENST00000342887 TECPR2O15040 1411 aa11.1□□□□□ -0.63
CFAP54-201ENST00000342887 HNRNPUQ00839 825 aaKnown RBP eCLIP11.1□□□□□ -0.63
CFAP54-201ENST00000342887 FMN2Q9NZ56 1722 aa11.1□□□□□ -0.63
CFAP54-201ENST00000342887 FBLN2P98095 1184 aa11.1□□□□□ -0.63
CFAP54-201ENST00000342887 ITSN1Q15811 1721 aa11.09□□□□□ -0.63
CFAP54-201ENST00000342887 LRRC37A3O60309 1634 aa11.09□□□□□ -0.63
CFAP54-201ENST00000342887 RPGRIP1LQ68CZ1 1315 aa11.09□□□□□ -0.63
CFAP54-201ENST00000342887 AFAP1Q8N556 730 aa11.08□□□□□ -0.63
CFAP54-201ENST00000342887 MRS2Q9HD23 443 aa11.08□□□□□ -0.63
CFAP54-201ENST00000342887 KDM2BQ8NHM5 1336 aa11.08□□□□□ -0.64
CFAP54-201ENST00000342887 PHRF1Q9P1Y6 1649 aaKnown RBP11.08□□□□□ -0.64
CFAP54-201ENST00000342887 XRN1Q8IZH2 1706 aaKnown RBP11.08□□□□□ -0.64
CFAP54-201ENST00000342887 EIF3AQ14152 1382 aaKnown RBP11.07□□□□□ -0.64
CFAP54-201ENST00000342887 C14orf93Q9H972 538 aaKnown RBP11.06□□□□□ -0.64
CFAP54-201ENST00000342887 YEATS2Q9ULM3 1422 aa11.06□□□□□ -0.64
CFAP54-201ENST00000342887 ZMYM3Q14202 1370 aa11.05□□□□□ -0.64
CFAP54-201ENST00000342887 ZNF142P52746 1687 aaPredicted RBP11.05□□□□□ -0.64
CFAP54-201ENST00000342887 CFAP65Q6ZU64 1925 aaKnown RBP11.05□□□□□ -0.64
CFAP54-201ENST00000342887 PNPLA6Q8IY17 1366 aa11.05□□□□□ -0.64
CFAP54-201ENST00000342887 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms