RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 RUNDC1Q96C34 613 aa15.59■□□□□ 0.09
SNRNP48-201ENST00000342415 CC2D2AQ9P2K1 1620 aa15.59■□□□□ 0.09
SNRNP48-201ENST00000342415 C22orf23Q9BZE7 217 aa15.59■□□□□ 0.09
SNRNP48-201ENST00000342415 CABP2Q9NPB3 220 aa15.58■□□□□ 0.09
SNRNP48-201ENST00000342415 RIPK4P57078 832 aa15.58■□□□□ 0.08
SNRNP48-201ENST00000342415 LMOD2Q6P5Q4 547 aa15.58■□□□□ 0.08
SNRNP48-201ENST00000342415 DNMBPQ6XZF7 1577 aa15.58■□□□□ 0.08
SNRNP48-201ENST00000342415 PLB1Q6P1J6 1458 aa15.57■□□□□ 0.08
SNRNP48-201ENST00000342415 GRIN2BQ13224 1484 aa15.57■□□□□ 0.08
SNRNP48-201ENST00000342415 ROCK1Q13464 1354 aa15.57■□□□□ 0.08
SNRNP48-201ENST00000342415 SLFN5Q08AF3 891 aa15.56■□□□□ 0.08
SNRNP48-201ENST00000342415 HMOX1P09601 288 aa15.56■□□□□ 0.08
SNRNP48-201ENST00000342415 DUSP27Q5VZP5 1158 aa15.56■□□□□ 0.08
SNRNP48-201ENST00000342415 DDX49Q9Y6V7 483 aaKnown RBP15.55■□□□□ 0.08
SNRNP48-201ENST00000342415 ERBINQ96RT1 1412 aa15.55■□□□□ 0.08
SNRNP48-201ENST00000342415 EXOSC9Q06265 439 aaKnown RBP15.55■□□□□ 0.08
SNRNP48-201ENST00000342415 CHMP4BQ9H444 224 aaKnown RBP15.54■□□□□ 0.08
SNRNP48-201ENST00000342415 C1orf115Q9H7X2 142 aa15.54■□□□□ 0.08
SNRNP48-201ENST00000342415 TERF2IPQ9NYB0 399 aa15.54■□□□□ 0.08
SNRNP48-201ENST00000342415 THOC2Q8NI27 1593 aaKnown RBP15.53■□□□□ 0.08
SNRNP48-201ENST00000342415 DISP3Q9P2K9 1392 aa15.53■□□□□ 0.08
SNRNP48-201ENST00000342415 HECW1Q76N89 1606 aa15.53■□□□□ 0.08
SNRNP48-201ENST00000342415 IGHDP01880 384 aa15.53■□□□□ 0.08
SNRNP48-201ENST00000342415 CHMP5Q9NZZ3 219 aa15.53■□□□□ 0.08
SNRNP48-201ENST00000342415 ARHGEF11O15085 1522 aa15.52■□□□□ 0.08
SNRNP48-201ENST00000342415 CALD1Q05682 793 aaKnown RBP15.52■□□□□ 0.08
SNRNP48-201ENST00000342415 DHX29Q7Z478 1369 aaKnown RBP15.52■□□□□ 0.07
SNRNP48-201ENST00000342415 OS9Q13438 667 aaPredicted RBP15.51■□□□□ 0.07
SNRNP48-201ENST00000342415 WWC1Q8IX03 1113 aa15.51■□□□□ 0.07
SNRNP48-201ENST00000342415 DDX19BQ9UMR2 479 aa15.51■□□□□ 0.07
SNRNP48-201ENST00000342415 CAMSAP2Q08AD1 1489 aa15.51■□□□□ 0.07
SNRNP48-201ENST00000342415 A0A0G2JS52 829 aa15.5■□□□□ 0.07
SNRNP48-201ENST00000342415 RSPH6AQ9H0K4 717 aa15.5■□□□□ 0.07
SNRNP48-201ENST00000342415 PDE3AQ14432 1141 aa15.5■□□□□ 0.07
SNRNP48-201ENST00000342415 TRIM6-TRIM34B2RNG4 842 aa15.5■□□□□ 0.07
SNRNP48-201ENST00000342415 TRAK2O60296 914 aa15.5■□□□□ 0.07
SNRNP48-201ENST00000342415 URB2Q14146 1524 aaKnown RBP15.5■□□□□ 0.07
SNRNP48-201ENST00000342415 EVC2Q86UK5 1308 aa15.49■□□□□ 0.07
SNRNP48-201ENST00000342415 KCNJ4P48050 445 aa15.48■□□□□ 0.07
SNRNP48-201ENST00000342415 VSIG10Q8N0Z9 540 aa15.48■□□□□ 0.07
SNRNP48-201ENST00000342415 HSP90AA2PQ14568 343 aaPredicted RBP15.48■□□□□ 0.07
SNRNP48-201ENST00000342415 DDX11L8A8MPP1 907 aa15.47■□□□□ 0.07
SNRNP48-201ENST00000342415 DIAPH1O60610 1272 aaKnown RBP15.47■□□□□ 0.07
SNRNP48-201ENST00000342415 NECTIN2Q92692 538 aa15.47■□□□□ 0.07
SNRNP48-201ENST00000342415 SNAPC4Q5SXM2 1469 aa15.47■□□□□ 0.07
SNRNP48-201ENST00000342415 RTF1Q92541 710 aaKnown RBP15.47■□□□□ 0.07
SNRNP48-201ENST00000342415 TNNQ9UQP3 1299 aa15.46■□□□□ 0.07
SNRNP48-201ENST00000342415 NOB1Q9ULX3 412 aaKnown RBP15.46■□□□□ 0.07
SNRNP48-201ENST00000342415 IQGAP2Q13576 1575 aa15.46■□□□□ 0.07
SNRNP48-201ENST00000342415 ARHGAP5Q13017 1502 aa15.46■□□□□ 0.07
SNRNP48-201ENST00000342415 SPINK5Q9NQ38 1064 aaPredicted RBP15.46■□□□□ 0.06
SNRNP48-201ENST00000342415 UGGT2Q9NYU1 1516 aa15.45■□□□□ 0.06
SNRNP48-201ENST00000342415 RILPL2Q969X0 211 aa15.44■□□□□ 0.06
SNRNP48-201ENST00000342415 VGFO15240 615 aaPredicted RBP15.43■□□□□ 0.06
SNRNP48-201ENST00000342415 SEC24BO95487 1268 aa15.43■□□□□ 0.06
SNRNP48-201ENST00000342415 LTV1Q96GA3 475 aaPredicted RBP15.43■□□□□ 0.06
SNRNP48-201ENST00000342415 PER1O15534 1290 aaPredicted RBP15.43■□□□□ 0.06
SNRNP48-201ENST00000342415 ZNF608Q9ULD9 1512 aaPredicted RBP15.42■□□□□ 0.06
SNRNP48-201ENST00000342415 RARSP54136 660 aaKnown RBP15.42■□□□□ 0.06
SNRNP48-201ENST00000342415 C8orf34Q49A92 452 aa15.42■□□□□ 0.06
SNRNP48-201ENST00000342415 CYB5RLQ6IPT4 315 aa15.42■□□□□ 0.06
SNRNP48-201ENST00000342415 THUMPD2Q9BTF0 503 aaKnown RBP15.42■□□□□ 0.06
SNRNP48-201ENST00000342415 NAP1L2Q9ULW6 460 aaPredicted RBP15.42■□□□□ 0.06
SNRNP48-201ENST00000342415 PRKCSHP14314 528 aaPredicted RBP15.42■□□□□ 0.06
SNRNP48-201ENST00000342415 MCTP1Q6DN14 999 aa15.42■□□□□ 0.06
SNRNP48-201ENST00000342415 NGEFQ8N5V2 710 aa15.41■□□□□ 0.06
SNRNP48-201ENST00000342415 KIAA0586Q9BVV6 1533 aa15.41■□□□□ 0.06
SNRNP48-201ENST00000342415 TESK2Q96S53 571 aa15.41■□□□□ 0.06
SNRNP48-201ENST00000342415 MCCP23508 829 aa15.41■□□□□ 0.06
SNRNP48-201ENST00000342415 TBC1D2Q9BYX2 928 aa15.41■□□□□ 0.06
SNRNP48-201ENST00000342415 PRKAR2BP31323 418 aa15.4■□□□□ 0.06
SNRNP48-201ENST00000342415 MVPQ14764 893 aaKnown RBP15.4■□□□□ 0.06
SNRNP48-201ENST00000342415 PLEKHH1Q9ULM0 1364 aa15.4■□□□□ 0.06
SNRNP48-201ENST00000342415 MCM4P33991 863 aa15.4■□□□□ 0.06
SNRNP48-201ENST00000342415 CUL7Q14999 1698 aa15.4■□□□□ 0.06
SNRNP48-201ENST00000342415 PCDHB15Q9Y5E8 787 aa15.39■□□□□ 0.05
SNRNP48-201ENST00000342415 ST18O60284 1047 aa15.39■□□□□ 0.05
SNRNP48-201ENST00000342415 FGD1P98174 961 aa15.39■□□□□ 0.05
SNRNP48-201ENST00000342415 GPATCH8Q9UKJ3 1502 aaKnown RBP15.39■□□□□ 0.05
SNRNP48-201ENST00000342415 ADGRF5Q8IZF2 1346 aa15.39■□□□□ 0.05
SNRNP48-201ENST00000342415 MPNDQ8N594 471 aa15.39■□□□□ 0.05
SNRNP48-201ENST00000342415 AMER1Q5JTC6 1135 aaPredicted RBP15.38■□□□□ 0.05
SNRNP48-201ENST00000342415 RNF214Q8ND24 703 aa15.38■□□□□ 0.05
SNRNP48-201ENST00000342415 SYNJ2O15056 1496 aa15.38■□□□□ 0.05
SNRNP48-201ENST00000342415 ATF7IPQ6VMQ6 1270 aa15.38■□□□□ 0.05
SNRNP48-201ENST00000342415 TMEM57Q8N5G2 664 aa15.38■□□□□ 0.05
SNRNP48-201ENST00000342415 GOLGA6L4A6NEF3 574 aa15.37■□□□□ 0.05
SNRNP48-201ENST00000342415 SSH1Q8WYL5 1049 aa15.37■□□□□ 0.05
SNRNP48-201ENST00000342415 STK31Q9BXU1 1019 aa15.37■□□□□ 0.05
SNRNP48-201ENST00000342415 DMRT2Q9Y5R5 561 aa15.37■□□□□ 0.05
SNRNP48-201ENST00000342415 FBLN1P23142 703 aa15.37■□□□□ 0.05
SNRNP48-201ENST00000342415 SCAPERQ9BY12 1400 aa15.37■□□□□ 0.05
SNRNP48-201ENST00000342415 RNF123Q5XPI4 1314 aa15.37■□□□□ 0.05
SNRNP48-201ENST00000342415 PARD3Q8TEW0 1356 aa15.36■□□□□ 0.05
SNRNP48-201ENST00000342415 MRE11P49959 708 aa15.36■□□□□ 0.05
SNRNP48-201ENST00000342415 CFAP43Q8NDM7 1665 aa15.36■□□□□ 0.05
SNRNP48-201ENST00000342415 KIF16BQ96L93 1317 aa15.36■□□□□ 0.05
SNRNP48-201ENST00000342415 FAM13BQ9NYF5 915 aa15.36■□□□□ 0.05
SNRNP48-201ENST00000342415 PLEKHH2Q8IVE3 1493 aa15.36■□□□□ 0.05
SNRNP48-201ENST00000342415 KIAA1211Q6ZU35 1233 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms