RNA–Protein interactions for RNA: ENST00000342018.12

GTF3C5-201, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 5 BASIC

Gene GTF3C5, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-201ENST00000342018 MYO3AQ8NEV4 1616 aa27.45■■□□□ 1.99
GTF3C5-201ENST00000342018 MYOM2P54296 1465 aa27.45■■□□□ 1.99
GTF3C5-201ENST00000342018 KDM4FA0A1W2PPD8 638 aa27.44■■□□□ 1.98
GTF3C5-201ENST00000342018 UBR1Q8IWV7 1749 aa27.43■■□□□ 1.98
GTF3C5-201ENST00000342018 VGFO15240 615 aaPredicted RBP27.43■■□□□ 1.98
GTF3C5-201ENST00000342018 RALGAPBQ86X10 1494 aa27.41■■□□□ 1.98
GTF3C5-201ENST00000342018 ROCK2O75116 1388 aaKnown RBP27.41■■□□□ 1.98
GTF3C5-201ENST00000342018 RIMS2Q9UQ26 1411 aa27.41■■□□□ 1.98
GTF3C5-201ENST00000342018 TRPM1Q7Z4N2 1603 aa27.4■■□□□ 1.98
GTF3C5-201ENST00000342018 NBPF1Q3BBV0 1214 aa27.4■■□□□ 1.98
GTF3C5-201ENST00000342018 HIRIP3Q9BW71 556 aaPredicted RBP27.39■■□□□ 1.98
GTF3C5-201ENST00000342018 CARD11Q9BXL7 1154 aa27.39■■□□□ 1.97
GTF3C5-201ENST00000342018 KDM5AP29375 1690 aaKnown RBP27.37■■□□□ 1.97
GTF3C5-201ENST00000342018 CFAP70Q5T0N1 1121 aa27.37■■□□□ 1.97
GTF3C5-201ENST00000342018 NRXN1Q9ULB1 1477 aa27.37■■□□□ 1.97
GTF3C5-201ENST00000342018 CEP170BQ9Y4F5 1589 aaPredicted RBP27.37■■□□□ 1.97
GTF3C5-201ENST00000342018 TMEM2Q9UHN6 1383 aa27.36■■□□□ 1.97
GTF3C5-201ENST00000342018 SETD1BQ9UPS6 1966 aaKnown RBP27.35■■□□□ 1.97
GTF3C5-201ENST00000342018 ZNF316A6NFI3 1004 aaPredicted RBP27.35■■□□□ 1.97
GTF3C5-201ENST00000342018 THEMISQ8N1K5 641 aaPredicted RBP27.35■■□□□ 1.97
GTF3C5-201ENST00000342018 PIK3C2GO75747 1445 aa27.34■■□□□ 1.97
GTF3C5-201ENST00000342018 ZFYVE9O95405 1425 aa27.33■■□□□ 1.97
GTF3C5-201ENST00000342018 EIF4G2P78344 907 aaKnown RBP eCLIP27.33■■□□□ 1.97
GTF3C5-201ENST00000342018 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.33■■□□□ 1.97
GTF3C5-201ENST00000342018 HDGFP51858 240 aaKnown RBP27.32■■□□□ 1.96
GTF3C5-201ENST00000342018 HSPA5P11021 654 aaKnown RBP27.31■■□□□ 1.96
GTF3C5-201ENST00000342018 TXNDC2Q86VQ3 553 aa27.29■■□□□ 1.96
GTF3C5-201ENST00000342018 BCANQ96GW7 911 aa27.29■■□□□ 1.96
GTF3C5-201ENST00000342018 C14orf93Q9H972 538 aaKnown RBP27.28■■□□□ 1.96
GTF3C5-201ENST00000342018 EID1Q9Y6B2 187 aa27.28■■□□□ 1.96
GTF3C5-201ENST00000342018 USP47Q96K76 1375 aa27.28■■□□□ 1.96
GTF3C5-201ENST00000342018 ZNF142P52746 1687 aaPredicted RBP27.28■■□□□ 1.96
GTF3C5-201ENST00000342018 LTKP29376 864 aa27.28■■□□□ 1.96
GTF3C5-201ENST00000342018 KIAA1210Q9ULL0 1709 aa27.26■■□□□ 1.95
GTF3C5-201ENST00000342018 GPRASP1Q5JY77 1395 aa27.26■■□□□ 1.95
GTF3C5-201ENST00000342018 TMEM132EQ6IEE7 984 aa27.25■■□□□ 1.95
GTF3C5-201ENST00000342018 SLIT1O75093 1534 aa27.24■■□□□ 1.95
GTF3C5-201ENST00000342018 ARHGAP23Q9P227 1491 aa27.22■■□□□ 1.95
GTF3C5-201ENST00000342018 LAMC1P11047 1609 aa27.2■■□□□ 1.94
GTF3C5-201ENST00000342018 ALKQ9UM73 1620 aa27.18■■□□□ 1.94
GTF3C5-201ENST00000342018 ST20-MTHFSA0A0A6YYL1 179 aa27.18■■□□□ 1.94
GTF3C5-201ENST00000342018 SCAF11Q99590 1463 aaKnown RBP27.17■■□□□ 1.94
GTF3C5-201ENST00000342018 SETBP1Q9Y6X0 1596 aa27.16■■□□□ 1.94
GTF3C5-201ENST00000342018 ANKLE2Q86XL3 938 aa27.16■■□□□ 1.94
GTF3C5-201ENST00000342018 PLEKHG1Q9ULL1 1385 aa27.16■■□□□ 1.94
GTF3C5-201ENST00000342018 IQGAP1P46940 1657 aa27.15■■□□□ 1.94
GTF3C5-201ENST00000342018 ADGRB1O14514 1584 aa27.15■■□□□ 1.94
GTF3C5-201ENST00000342018 NRXN3Q9Y4C0 1643 aa27.15■■□□□ 1.94
GTF3C5-201ENST00000342018 STK26Q9P289 416 aa27.14■■□□□ 1.94
GTF3C5-201ENST00000342018 TRAK1Q9UPV9 953 aa27.14■■□□□ 1.94
GTF3C5-201ENST00000342018 SLC26A8Q96RN1 970 aa27.12■■□□□ 1.93
GTF3C5-201ENST00000342018 ASXL1Q8IXJ9 1541 aa27.12■■□□□ 1.93
GTF3C5-201ENST00000342018 HSPA2P54652 639 aa27.09■■□□□ 1.93
GTF3C5-201ENST00000342018 EIF3AQ14152 1382 aaKnown RBP27.08■■□□□ 1.93
GTF3C5-201ENST00000342018 ADAMTS13Q76LX8 1427 aa27.08■■□□□ 1.93
GTF3C5-201ENST00000342018 METP08581 1390 aa27.08■■□□□ 1.93
GTF3C5-201ENST00000342018 SETD1AO15047 1707 aaKnown RBP27.07■■□□□ 1.92
GTF3C5-201ENST00000342018 NCKAP5LQ9HCH0 1330 aa27.07■■□□□ 1.92
GTF3C5-201ENST00000342018 YTHDC2Q9H6S0 1430 aaKnown RBP27.06■■□□□ 1.92
GTF3C5-201ENST00000342018 C11orf95C9JLR9 678 aaPredicted RBP27.04■■□□□ 1.92
GTF3C5-201ENST00000342018 LMTK3Q96Q04 1460 aa27.03■■□□□ 1.92
GTF3C5-201ENST00000342018 POLR3GLQ9BT43 218 aa27.02■■□□□ 1.92
GTF3C5-201ENST00000342018 POLR1AO95602 1720 aaPredicted RBP27.01■■□□□ 1.91
GTF3C5-201ENST00000342018 TESK2Q96S53 571 aa27■■□□□ 1.91
GTF3C5-201ENST00000342018 WASHC2AQ641Q2 1341 aa27■■□□□ 1.91
GTF3C5-201ENST00000342018 CENPJQ9HC77 1338 aaPredicted RBP27■■□□□ 1.91
GTF3C5-201ENST00000342018 SAFB2Q14151 953 aaKnown RBP eCLIP27■■□□□ 1.91
GTF3C5-201ENST00000342018 TBX22Q9Y458 520 aa27■■□□□ 1.91
GTF3C5-201ENST00000342018 MED14O60244 1454 aa26.99■■□□□ 1.91
GTF3C5-201ENST00000342018 LRPPRCP42704 1394 aaKnown RBP26.99■■□□□ 1.91
GTF3C5-201ENST00000342018 NPHP4O75161 1426 aaPredicted RBP26.99■■□□□ 1.91
GTF3C5-201ENST00000342018 ARHGEF28Q8N1W1 1705 aaKnown RBP26.97■■□□□ 1.91
GTF3C5-201ENST00000342018 PRAM1Q96QH2 718 aa26.96■■□□□ 1.91
GTF3C5-201ENST00000342018 POGKQ9P215 609 aa26.96■■□□□ 1.91
GTF3C5-201ENST00000342018 KIF7Q2M1P5 1343 aa26.96■■□□□ 1.91
GTF3C5-201ENST00000342018 DIP2AQ14689 1571 aa26.95■■□□□ 1.91
GTF3C5-201ENST00000342018 DDX10Q13206 875 aaKnown RBP26.95■■□□□ 1.9
GTF3C5-201ENST00000342018 CCDC7Q96M83 1385 aa26.95■■□□□ 1.9
GTF3C5-201ENST00000342018 TMF1P82094 1093 aa26.94■■□□□ 1.9
GTF3C5-201ENST00000342018 ABCC11Q96J66 1382 aa26.94■■□□□ 1.9
GTF3C5-201ENST00000342018 DISP3Q9P2K9 1392 aa26.93■■□□□ 1.9
GTF3C5-201ENST00000342018 DIEXFQ68CQ4 756 aaKnown RBP26.92■■□□□ 1.9
GTF3C5-201ENST00000342018 WAPLQ7Z5K2 1190 aa26.92■■□□□ 1.9
GTF3C5-201ENST00000342018 PTPRUQ92729 1446 aa26.92■■□□□ 1.9
GTF3C5-201ENST00000342018 QRICH2Q9H0J4 1663 aa26.92■■□□□ 1.9
GTF3C5-201ENST00000342018 AMOTL2Q9Y2J4 779 aa26.92■■□□□ 1.9
GTF3C5-201ENST00000342018 PLEKHH1Q9ULM0 1364 aa26.88■■□□□ 1.89
GTF3C5-201ENST00000342018 DLC1Q96QB1 1528 aa26.88■■□□□ 1.89
GTF3C5-201ENST00000342018 MINK1Q8N4C8 1332 aaPredicted RBP26.87■■□□□ 1.89
GTF3C5-201ENST00000342018 KNDC1Q76NI1 1749 aa26.86■■□□□ 1.89
GTF3C5-201ENST00000342018 ROBO2Q9HCK4 1378 aa26.86■■□□□ 1.89
GTF3C5-201ENST00000342018 TECPR2O15040 1411 aa26.85■■□□□ 1.89
GTF3C5-201ENST00000342018 SBNO2Q9Y2G9 1366 aa26.85■■□□□ 1.89
GTF3C5-201ENST00000342018 CPS1P31327 1500 aa26.84■■□□□ 1.89
GTF3C5-201ENST00000342018 PIK3R4Q99570 1358 aa26.84■■□□□ 1.89
GTF3C5-201ENST00000342018 SLC24A1O60721 1099 aa26.83■■□□□ 1.89
GTF3C5-201ENST00000342018 KCNA6P17658 529 aa26.83■■□□□ 1.89
GTF3C5-201ENST00000342018 STRCQ7RTU9 1775 aa26.81■■□□□ 1.88
GTF3C5-201ENST00000342018 CDCA8Q53HL2 280 aa26.81■■□□□ 1.88
GTF3C5-201ENST00000342018 FAM135BQ49AJ0 1406 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms