RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 AMOTL1Q8IY63 956 aa14.01□□□□□ -0.17
TNC-201ENST00000341037 EXOC6Q8TAG9 804 aa14.01□□□□□ -0.17
TNC-201ENST00000341037 E9PSI1 815 aa14□□□□□ -0.17
TNC-201ENST00000341037 CENPQQ7L2Z9 268 aaPredicted RBP14□□□□□ -0.17
TNC-201ENST00000341037 KLHL34Q8N239 644 aa14□□□□□ -0.17
TNC-201ENST00000341037 VPS37DQ86XT2 251 aa13.99□□□□□ -0.17
TNC-201ENST00000341037 USP47Q96K76 1375 aa13.99□□□□□ -0.17
TNC-201ENST00000341037 CADPSQ9ULU8 1353 aa13.99□□□□□ -0.17
TNC-201ENST00000341037 DDX11L8A8MPP1 907 aa13.98□□□□□ -0.17
TNC-201ENST00000341037 FOSBP53539 338 aa13.98□□□□□ -0.17
TNC-201ENST00000341037 DHX16O60231 1041 aaKnown RBP13.98□□□□□ -0.17
TNC-201ENST00000341037 RRP1P56182 461 aaKnown RBP13.98□□□□□ -0.17
TNC-201ENST00000341037 CCAR2Q8N163 923 aaKnown RBP13.98□□□□□ -0.17
TNC-201ENST00000341037 TPM2P07951 284 aa13.98□□□□□ -0.17
TNC-201ENST00000341037 IFIT2P09913 472 aaKnown RBP13.98□□□□□ -0.17
TNC-201ENST00000341037 DIAPH1O60610 1272 aaKnown RBP13.98□□□□□ -0.17
TNC-201ENST00000341037 GOLGA6L19H0YKK7 550 aa13.97□□□□□ -0.17
TNC-201ENST00000341037 RIPK4P57078 832 aa13.97□□□□□ -0.17
TNC-201ENST00000341037 TSR1Q2NL82 804 aaKnown RBP13.97□□□□□ -0.17
TNC-201ENST00000341037 APAF1O14727 1248 aa13.97□□□□□ -0.17
TNC-201ENST00000341037 FAM161AQ3B820 660 aa13.97□□□□□ -0.17
TNC-201ENST00000341037 SAMD1Q6SPF0 538 aaPredicted RBP13.97□□□□□ -0.17
TNC-201ENST00000341037 PTPRGP23470 1445 aa13.96□□□□□ -0.17
TNC-201ENST00000341037 TRIM29Q14134 588 aa13.96□□□□□ -0.17
TNC-201ENST00000341037 PCMTD1Q96MG8 357 aaPredicted RBP13.96□□□□□ -0.17
TNC-201ENST00000341037 NUTM2GQ5VZR2 741 aa13.96□□□□□ -0.17
TNC-201ENST00000341037 DDX49Q9Y6V7 483 aaKnown RBP13.96□□□□□ -0.17
TNC-201ENST00000341037 TNNT3P45378 269 aaPredicted RBP13.95□□□□□ -0.18
TNC-201ENST00000341037 BECN2A8MW95 431 aa13.94□□□□□ -0.18
TNC-201ENST00000341037 NFXL1Q6ZNB6 911 aa13.94□□□□□ -0.18
TNC-201ENST00000341037 HMOX1P09601 288 aa13.94□□□□□ -0.18
TNC-201ENST00000341037 PDE4AP27815 886 aa13.94□□□□□ -0.18
TNC-201ENST00000341037 FBXO3Q9UK99 471 aa13.94□□□□□ -0.18
TNC-201ENST00000341037 FYB1O15117 783 aa13.93□□□□□ -0.18
TNC-201ENST00000341037 FKBP5Q13451 457 aaPredicted RBP13.93□□□□□ -0.18
TNC-201ENST00000341037 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
TNC-201ENST00000341037 LRRFIP1Q32MZ4 808 aaKnown RBP13.93□□□□□ -0.18
TNC-201ENST00000341037 RUFY2Q8WXA3 655 aa13.93□□□□□ -0.18
TNC-201ENST00000341037 AEBP2Q6ZN18 517 aaPredicted RBP13.93□□□□□ -0.18
TNC-201ENST00000341037 AIMP1Q12904 312 aaKnown RBP13.92□□□□□ -0.18
TNC-201ENST00000341037 TSPYL4Q9UJ04 414 aa13.92□□□□□ -0.18
TNC-201ENST00000341037 DHX57Q6P158 1386 aaKnown RBP13.92□□□□□ -0.18
TNC-201ENST00000341037 DDX58O95786 925 aaKnown RBP13.92□□□□□ -0.18
TNC-201ENST00000341037 G3BP1Q13283 466 aaKnown RBP eCLIP13.92□□□□□ -0.18
TNC-201ENST00000341037 ZNF592Q92610 1267 aa13.92□□□□□ -0.18
TNC-201ENST00000341037 TPM1P09493 284 aa13.91□□□□□ -0.18
TNC-201ENST00000341037 CWC22Q9HCG8 908 aaKnown RBP13.91□□□□□ -0.18
TNC-201ENST00000341037 ATP6V1DQ9Y5K8 247 aa13.91□□□□□ -0.18
TNC-201ENST00000341037 RUSC2Q8N2Y8 1516 aa13.91□□□□□ -0.18
TNC-201ENST00000341037 CPLX1O14810 134 aa13.91□□□□□ -0.18
TNC-201ENST00000341037 KDM4AO75164 1064 aa13.9□□□□□ -0.18
TNC-201ENST00000341037 ZKSCAN1P17029 563 aaPredicted RBP13.9□□□□□ -0.18
TNC-201ENST00000341037 DDX19BQ9UMR2 479 aa13.9□□□□□ -0.18
TNC-201ENST00000341037 PRKRIP1Q9H875 184 aaPredicted RBP13.9□□□□□ -0.18
TNC-201ENST00000341037 DZIP1LQ8IYY4 767 aaKnown RBP13.89□□□□□ -0.19
TNC-201ENST00000341037 RBM33Q96EV2 1170 aaKnown RBP13.89□□□□□ -0.19
TNC-201ENST00000341037 ERICH2A1L162 156 aa13.89□□□□□ -0.19
TNC-201ENST00000341037 CHMP4CQ96CF2 233 aa13.89□□□□□ -0.19
TNC-201ENST00000341037 FAM69CQ0P6D2 419 aa13.89□□□□□ -0.19
TNC-201ENST00000341037 CPLX2Q6PUV4 134 aaKnown RBP13.89□□□□□ -0.19
TNC-201ENST00000341037 ATF3P18847 181 aa13.89□□□□□ -0.19
TNC-201ENST00000341037 TRDNQ13061 729 aa13.89□□□□□ -0.19
TNC-201ENST00000341037 RIC3Q7Z5B4 369 aa13.89□□□□□ -0.19
TNC-201ENST00000341037 CCDC27Q2M243 656 aa13.88□□□□□ -0.19
TNC-201ENST00000341037 CABP2Q9NPB3 220 aa13.88□□□□□ -0.19
TNC-201ENST00000341037 ROCK1Q13464 1354 aa13.88□□□□□ -0.19
TNC-201ENST00000341037 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.88□□□□□ -0.19
TNC-201ENST00000341037 PHF23Q9BUL5 403 aaPredicted RBP13.88□□□□□ -0.19
TNC-201ENST00000341037 BICD2Q8TD16 824 aa13.88□□□□□ -0.19
TNC-201ENST00000341037 NEUROD6Q96NK8 337 aa13.88□□□□□ -0.19
TNC-201ENST00000341037 REC8O95072 547 aa13.88□□□□□ -0.19
TNC-201ENST00000341037 MTMR7Q9Y216 660 aa13.88□□□□□ -0.19
TNC-201ENST00000341037 RUNDC1Q96C34 613 aa13.87□□□□□ -0.19
TNC-201ENST00000341037 API5Q9BZZ5 524 aaKnown RBP13.87□□□□□ -0.19
TNC-201ENST00000341037 SMARCA4P51532 1647 aa13.87□□□□□ -0.19
TNC-201ENST00000341037 PATL2C9JE40 543 aaKnown RBP13.87□□□□□ -0.19
TNC-201ENST00000341037 USP35Q9P2H5 1018 aa13.87□□□□□ -0.19
TNC-201ENST00000341037 ZBED9Q6R2W3 1325 aa13.86□□□□□ -0.19
TNC-201ENST00000341037 CCDC47Q96A33 483 aaKnown RBP13.86□□□□□ -0.19
TNC-201ENST00000341037 VPS37CA5D8V6 355 aaPredicted RBP13.86□□□□□ -0.19
TNC-201ENST00000341037 OSCARQ8IYS5 282 aa13.86□□□□□ -0.19
TNC-201ENST00000341037 RAPGEF4Q8WZA2 1011 aa13.86□□□□□ -0.19
TNC-201ENST00000341037 SKOR2Q2VWA4 1001 aaPredicted RBP13.86□□□□□ -0.19
TNC-201ENST00000341037 CNKSR2Q8WXI2 1034 aa13.86□□□□□ -0.19
TNC-201ENST00000341037 GGNBP2Q9H3C7 697 aa13.86□□□□□ -0.19
TNC-201ENST00000341037 NLRP2Q9NX02 1062 aa13.86□□□□□ -0.19
TNC-201ENST00000341037 CCDC43Q96MW1 224 aaKnown RBP13.85□□□□□ -0.19
TNC-201ENST00000341037 FAM177BA6PVY3 158 aa13.85□□□□□ -0.19
TNC-201ENST00000341037 RNF20Q5VTR2 975 aa13.85□□□□□ -0.19
TNC-201ENST00000341037 WASHC4Q2M389 1173 aa13.85□□□□□ -0.19
TNC-201ENST00000341037 CCDC70Q6NSX1 233 aa13.84□□□□□ -0.19
TNC-201ENST00000341037 ATAD2BQ9ULI0 1458 aa13.84□□□□□ -0.19
TNC-201ENST00000341037 TMEM132EQ6IEE7 984 aa13.83□□□□□ -0.2
TNC-201ENST00000341037 LNPKQ9C0E8 428 aa13.83□□□□□ -0.2
TNC-201ENST00000341037 INTS3Q68E01 1043 aaKnown RBP13.83□□□□□ -0.2
TNC-201ENST00000341037 SMC3Q9UQE7 1217 aa13.83□□□□□ -0.2
TNC-201ENST00000341037 ZNF644Q9H582 1327 aaPredicted RBP13.83□□□□□ -0.2
TNC-201ENST00000341037 ANKRD20A12PQ8NF67 263 aa13.82□□□□□ -0.2
TNC-201ENST00000341037 HOOK1Q9UJC3 728 aaKnown RBP13.82□□□□□ -0.2
TNC-201ENST00000341037 GNAI1P63096 354 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms