RNA–Protein interactions for RNA: ENST00000340898.6

RNFT1P3-201, Transcript of ring finger protein, transmembrane 1 pseudogene 3, humanhuman

BASIC

Gene RNFT1P3, Length 1,052 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1P3-201ENST00000340898 CTTNBP2Q8WZ74 1663 aa10.12□□□□□ -0.79
RNFT1P3-201ENST00000340898 ARXQ96QS3 562 aa10.12□□□□□ -0.79
RNFT1P3-201ENST00000340898 KIF13AQ9H1H9 1805 aa10.12□□□□□ -0.79
RNFT1P3-201ENST00000340898 HOXB3P14651 431 aaPredicted RBP10.11□□□□□ -0.79
RNFT1P3-201ENST00000340898 AMHR2Q16671 573 aa10.11□□□□□ -0.79
RNFT1P3-201ENST00000340898 ARSIQ5FYB1 569 aa10.11□□□□□ -0.79
RNFT1P3-201ENST00000340898 KIAA0556O60303 1618 aa10.11□□□□□ -0.79
RNFT1P3-201ENST00000340898 FAM69CQ0P6D2 419 aa10.1□□□□□ -0.79
RNFT1P3-201ENST00000340898 TYW1BQ6NUM6 668 aa10.1□□□□□ -0.79
RNFT1P3-201ENST00000340898 FBXW7Q969H0 707 aa10.1□□□□□ -0.79
RNFT1P3-201ENST00000340898 DDRGK1Q96HY6 314 aa10.1□□□□□ -0.79
RNFT1P3-201ENST00000340898 EEA1Q15075 1411 aa10.08□□□□□ -0.8
RNFT1P3-201ENST00000340898 UACAQ9BZF9 1416 aa10.08□□□□□ -0.8
RNFT1P3-201ENST00000340898 MAP3K7O43318 606 aa10.08□□□□□ -0.8
RNFT1P3-201ENST00000340898 NUDT7P0C024 238 aa10.08□□□□□ -0.8
RNFT1P3-201ENST00000340898 PTGDRQ13258 359 aa10.08□□□□□ -0.8
RNFT1P3-201ENST00000340898 FAM117AQ9C073 453 aa10.08□□□□□ -0.8
RNFT1P3-201ENST00000340898 PLSCR2Q9NRY7 297 aa10.08□□□□□ -0.8
RNFT1P3-201ENST00000340898 PCDHGA10Q9Y5H3 936 aa10.08□□□□□ -0.8
RNFT1P3-201ENST00000340898 ABCC10Q5T3U5 1492 aa10.08□□□□□ -0.8
RNFT1P3-201ENST00000340898 MAPKBP1O60336 1514 aa10.07□□□□□ -0.8
RNFT1P3-201ENST00000340898 UHRF1BP1LA0JNW5 1464 aa10.07□□□□□ -0.8
RNFT1P3-201ENST00000340898 PLB1Q6P1J6 1458 aa10.07□□□□□ -0.8
RNFT1P3-201ENST00000340898 FECHP22830 423 aa10.07□□□□□ -0.8
RNFT1P3-201ENST00000340898 RANGAP1P46060 587 aaPredicted RBP10.07□□□□□ -0.8
RNFT1P3-201ENST00000340898 GPR153Q6NV75 609 aa10.07□□□□□ -0.8
RNFT1P3-201ENST00000340898 ABCC2Q92887 1545 aa10.07□□□□□ -0.8
RNFT1P3-201ENST00000340898 KDM4FA0A1W2PPD8 638 aa10.06□□□□□ -0.8
RNFT1P3-201ENST00000340898 PRIM1P49642 420 aaKnown RBP10.06□□□□□ -0.8
RNFT1P3-201ENST00000340898 EN1Q05925 392 aaPredicted RBP10.06□□□□□ -0.8
RNFT1P3-201ENST00000340898 PARP9Q8IXQ6 854 aa10.06□□□□□ -0.8
RNFT1P3-201ENST00000340898 RBM33Q96EV2 1170 aaKnown RBP10.06□□□□□ -0.8
RNFT1P3-201ENST00000340898 PSDA5PKW4 1024 aaPredicted RBP10.05□□□□□ -0.8
RNFT1P3-201ENST00000340898 FOSBP53539 338 aa10.05□□□□□ -0.8
RNFT1P3-201ENST00000340898 ZNF454Q8N9F8 522 aa10.05□□□□□ -0.8
RNFT1P3-201ENST00000340898 DIP2BQ9P265 1576 aa10.05□□□□□ -0.8
RNFT1P3-201ENST00000340898 KDM5BQ9UGL1 1544 aa10.04□□□□□ -0.8
RNFT1P3-201ENST00000340898 TTLL12Q14166 644 aaPredicted RBP10.04□□□□□ -0.8
RNFT1P3-201ENST00000340898 KHSRPQ92945 711 aaKnown RBP eCLIP10.04□□□□□ -0.8
RNFT1P3-201ENST00000340898 ZDHHC16Q969W1 377 aa10.04□□□□□ -0.8
RNFT1P3-201ENST00000340898 ASXL2Q76L83 1435 aa10.04□□□□□ -0.8
RNFT1P3-201ENST00000340898 GOLGA3Q08378 1498 aa10.04□□□□□ -0.8
RNFT1P3-201ENST00000340898 ABCA8O94911 1581 aa10.02□□□□□ -0.81
RNFT1P3-201ENST00000340898 KIF21BO75037 1637 aa10.02□□□□□ -0.81
RNFT1P3-201ENST00000340898 ZCCHC11Q5TAX3 1644 aaKnown RBP10.02□□□□□ -0.81
RNFT1P3-201ENST00000340898 SAMD9Q5K651 1589 aa10.01□□□□□ -0.81
RNFT1P3-201ENST00000340898 PLEKHG3A1L390 1219 aa10.01□□□□□ -0.81
RNFT1P3-201ENST00000340898 ARID3CA6NKF2 412 aa10.01□□□□□ -0.81
RNFT1P3-201ENST00000340898 CERKQ8TCT0 537 aa10.01□□□□□ -0.81
RNFT1P3-201ENST00000340898 TSPOAP1O95153 1857 aa10.01□□□□□ -0.81
RNFT1P3-201ENST00000340898 POTEMA6NI47 508 aa10□□□□□ -0.81
RNFT1P3-201ENST00000340898 HOXB1P14653 301 aaPredicted RBP10□□□□□ -0.81
RNFT1P3-201ENST00000340898 PPP4R3BQ5MIZ7 849 aa10□□□□□ -0.81
RNFT1P3-201ENST00000340898 UBTFP17480 764 aaKnown RBP9.99□□□□□ -0.81
RNFT1P3-201ENST00000340898 C6orf132Q5T0Z8 1188 aa9.99□□□□□ -0.81
RNFT1P3-201ENST00000340898 LHX6Q9UPM6 363 aa9.99□□□□□ -0.81
RNFT1P3-201ENST00000340898 FHOD3Q2V2M9 1422 aa9.99□□□□□ -0.81
RNFT1P3-201ENST00000340898 CDHR5Q9HBB8 845 aa9.98□□□□□ -0.81
RNFT1P3-201ENST00000340898 NPDC1Q9NQX5 325 aaPredicted RBP9.98□□□□□ -0.81
RNFT1P3-201ENST00000340898 ATP10BO94823 1461 aa9.98□□□□□ -0.81
RNFT1P3-201ENST00000340898 EPRSP07814 1512 aaKnown RBP9.97□□□□□ -0.81
RNFT1P3-201ENST00000340898 TSR1Q2NL82 804 aaKnown RBP9.97□□□□□ -0.81
RNFT1P3-201ENST00000340898 POTEGQ6S5H5 508 aa9.97□□□□□ -0.81
RNFT1P3-201ENST00000340898 GIGYF2Q6Y7W6 1299 aaKnown RBP9.97□□□□□ -0.81
RNFT1P3-201ENST00000340898 HOMEZQ8IX15 550 aa9.97□□□□□ -0.81
RNFT1P3-201ENST00000340898 KCNH8Q96L42 1107 aa9.97□□□□□ -0.81
RNFT1P3-201ENST00000340898 ZMYND15Q9H091 742 aa9.97□□□□□ -0.81
RNFT1P3-201ENST00000340898 GOPCQ9HD26 462 aa9.97□□□□□ -0.81
RNFT1P3-201ENST00000340898 GLI2P10070 1586 aa9.97□□□□□ -0.81
RNFT1P3-201ENST00000340898 PPRC1Q5VV67 1664 aaKnown RBP9.96□□□□□ -0.81
RNFT1P3-201ENST00000340898 CLCN1P35523 988 aa9.95□□□□□ -0.82
RNFT1P3-201ENST00000340898 ADAM33Q9BZ11 813 aa9.95□□□□□ -0.82
RNFT1P3-201ENST00000340898 WDR7Q9Y4E6 1490 aa9.94□□□□□ -0.82
RNFT1P3-201ENST00000340898 COL17A1Q9UMD9 1497 aaPredicted RBP9.93□□□□□ -0.82
RNFT1P3-201ENST00000340898 RAPGEF6Q8TEU7 1601 aa9.93□□□□□ -0.82
RNFT1P3-201ENST00000340898 MAP3K4Q9Y6R4 1608 aa9.93□□□□□ -0.82
RNFT1P3-201ENST00000340898 NUP153P49790 1475 aaKnown RBP9.92□□□□□ -0.82
RNFT1P3-201ENST00000340898 ARHGAP35Q9NRY4 1499 aa9.92□□□□□ -0.82
RNFT1P3-201ENST00000340898 MS4A1P11836 297 aa9.92□□□□□ -0.82
RNFT1P3-201ENST00000340898 PTPREP23469 700 aa9.92□□□□□ -0.82
RNFT1P3-201ENST00000340898 RSPH6AQ9H0K4 717 aa9.92□□□□□ -0.82
RNFT1P3-201ENST00000340898 GPCPD1Q9NPB8 672 aa9.92□□□□□ -0.82
RNFT1P3-201ENST00000340898 OATP04181 439 aa9.91□□□□□ -0.82
RNFT1P3-201ENST00000340898 MDM2Q00987 491 aaPredicted RBP9.91□□□□□ -0.82
RNFT1P3-201ENST00000340898 FLIIQ13045 1269 aa9.91□□□□□ -0.82
RNFT1P3-201ENST00000340898 PCMTD1Q96MG8 357 aaPredicted RBP9.91□□□□□ -0.82
RNFT1P3-201ENST00000340898 BCL2L12Q9HB09 334 aa9.91□□□□□ -0.82
RNFT1P3-201ENST00000340898 TMUB1Q9BVT8 246 aa9.9□□□□□ -0.82
RNFT1P3-201ENST00000340898 REPIN1Q9BWE0 567 aaKnown RBP9.9□□□□□ -0.82
RNFT1P3-201ENST00000340898 PCDH10Q9P2E7 1040 aa9.9□□□□□ -0.82
RNFT1P3-201ENST00000340898 EFCAB5A4FU69 1503 aa9.9□□□□□ -0.82
RNFT1P3-201ENST00000340898 KDM6BO15054 1643 aa9.89□□□□□ -0.83
RNFT1P3-201ENST00000340898 RBM27Q9P2N5 1060 aaKnown RBP9.89□□□□□ -0.83
RNFT1P3-201ENST00000340898 CD109Q6YHK3 1445 aa9.89□□□□□ -0.83
RNFT1P3-201ENST00000340898 ERBB3P21860 1342 aa9.88□□□□□ -0.83
RNFT1P3-201ENST00000340898 PRSS12P56730 875 aa9.88□□□□□ -0.83
RNFT1P3-201ENST00000340898 SSTR3P32745 418 aaPredicted RBP9.87□□□□□ -0.83
RNFT1P3-201ENST00000340898 ATP1B4Q9UN42 357 aaPredicted RBP9.87□□□□□ -0.83
RNFT1P3-201ENST00000340898 SH3D19Q5HYK7 790 aa9.86□□□□□ -0.83
RNFT1P3-201ENST00000340898 PADI6Q6TGC4 694 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms