RNA–Protein interactions for RNA: ENST00000340650.5

NHLRC1-201, Transcript of NHL repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 BASIC

Gene NHLRC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1-201ENST00000340650 SIGLEC1Q9BZZ2 1709 aa26.51■■□□□ 1.83
NHLRC1-201ENST00000340650 SMG6Q86US8 1419 aaKnown RBP26.5■■□□□ 1.83
NHLRC1-201ENST00000340650 KIF1BO60333 1816 aa26.5■■□□□ 1.83
NHLRC1-201ENST00000340650 MADDQ8WXG6 1647 aa26.5■■□□□ 1.83
NHLRC1-201ENST00000340650 GPRASP1Q5JY77 1395 aa26.49■■□□□ 1.83
NHLRC1-201ENST00000340650 MLECQ14165 292 aa26.49■■□□□ 1.83
NHLRC1-201ENST00000340650 ZC3H13Q5T200 1668 aaKnown RBP26.49■■□□□ 1.83
NHLRC1-201ENST00000340650 MROH2AA6NES4 1674 aa26.49■■□□□ 1.83
NHLRC1-201ENST00000340650 REREQ9P2R6 1566 aa26.48■■□□□ 1.83
NHLRC1-201ENST00000340650 ARHGEF40Q8TER5 1519 aa26.48■■□□□ 1.83
NHLRC1-201ENST00000340650 TRHP20396 242 aaPredicted RBP26.47■■□□□ 1.83
NHLRC1-201ENST00000340650 NOS1P29475 1434 aa26.47■■□□□ 1.83
NHLRC1-201ENST00000340650 NEURL4Q96JN8 1562 aa26.46■■□□□ 1.83
NHLRC1-201ENST00000340650 ARHGAP31Q2M1Z3 1444 aa26.46■■□□□ 1.83
NHLRC1-201ENST00000340650 AGLP35573 1532 aa26.45■■□□□ 1.82
NHLRC1-201ENST00000340650 ADGRB3O60242 1522 aa26.44■■□□□ 1.82
NHLRC1-201ENST00000340650 SYNMO15061 1565 aa26.44■■□□□ 1.82
NHLRC1-201ENST00000340650 STAC3Q96MF2 364 aa26.43■■□□□ 1.82
NHLRC1-201ENST00000340650 ADGRF5Q8IZF2 1346 aa26.43■■□□□ 1.82
NHLRC1-201ENST00000340650 RNF123Q5XPI4 1314 aa26.42■■□□□ 1.82
NHLRC1-201ENST00000340650 FBXO31Q5XUX0 539 aaPredicted RBP26.4■■□□□ 1.82
NHLRC1-201ENST00000340650 LAMC1P11047 1609 aa26.4■■□□□ 1.82
NHLRC1-201ENST00000340650 MYOM2P54296 1465 aa26.38■■□□□ 1.81
NHLRC1-201ENST00000340650 IDI1Q13907 227 aa26.38■■□□□ 1.81
NHLRC1-201ENST00000340650 NUDCQ9Y266 331 aa26.37■■□□□ 1.81
NHLRC1-201ENST00000340650 PIK3C2BO00750 1634 aa26.36■■□□□ 1.81
NHLRC1-201ENST00000340650 CFAP70Q5T0N1 1121 aa26.36■■□□□ 1.81
NHLRC1-201ENST00000340650 IFT172Q9UG01 1749 aa26.36■■□□□ 1.81
NHLRC1-201ENST00000340650 PREX1Q8TCU6 1659 aa26.35■■□□□ 1.81
NHLRC1-201ENST00000340650 ARID4BQ4LE39 1312 aaPredicted RBP26.35■■□□□ 1.81
NHLRC1-201ENST00000340650 CLTCQ00610 1675 aaKnown RBP26.35■■□□□ 1.81
NHLRC1-201ENST00000340650 NOP58Q9Y2X3 529 aaKnown RBP26.34■■□□□ 1.81
NHLRC1-201ENST00000340650 PPP6R1Q9UPN7 881 aa26.34■■□□□ 1.81
NHLRC1-201ENST00000340650 NUTM2DQ5VT03 806 aaPredicted RBP26.33■■□□□ 1.81
NHLRC1-201ENST00000340650 SLC52A1Q9NWF4 448 aa26.32■■□□□ 1.8
NHLRC1-201ENST00000340650 TESK2Q96S53 571 aa26.31■■□□□ 1.8
NHLRC1-201ENST00000340650 ERVK-7P63135 1459 aa26.3■■□□□ 1.8
NHLRC1-201ENST00000340650 NRXN1Q9ULB1 1477 aa26.29■■□□□ 1.8
NHLRC1-201ENST00000340650 PPLO60437 1756 aa26.28■■□□□ 1.8
NHLRC1-201ENST00000340650 ESF1Q9H501 851 aaKnown RBP26.28■■□□□ 1.8
NHLRC1-201ENST00000340650 SCAF11Q99590 1463 aaKnown RBP26.28■■□□□ 1.8
NHLRC1-201ENST00000340650 DISP3Q9P2K9 1392 aa26.27■■□□□ 1.8
NHLRC1-201ENST00000340650 RPGRIP1LQ68CZ1 1315 aa26.27■■□□□ 1.8
NHLRC1-201ENST00000340650 IQGAP1P46940 1657 aa26.26■■□□□ 1.79
NHLRC1-201ENST00000340650 DEKP35659 375 aaKnown RBP26.26■■□□□ 1.79
NHLRC1-201ENST00000340650 CNGB1Q14028 1251 aaPredicted RBP26.26■■□□□ 1.79
NHLRC1-201ENST00000340650 DNAJC5Q9H3Z4 198 aa26.26■■□□□ 1.79
NHLRC1-201ENST00000340650 KIAA1210Q9ULL0 1709 aa26.26■■□□□ 1.79
NHLRC1-201ENST00000340650 PIK3C2GO75747 1445 aa26.24■■□□□ 1.79
NHLRC1-201ENST00000340650 SENP3Q9H4L4 574 aaPredicted RBP26.24■■□□□ 1.79
NHLRC1-201ENST00000340650 CCDC136Q96JN2 1154 aa26.23■■□□□ 1.79
NHLRC1-201ENST00000340650 NEXMIFQ5QGS0 1516 aa26.23■■□□□ 1.79
NHLRC1-201ENST00000340650 TMF1P82094 1093 aa26.22■■□□□ 1.79
NHLRC1-201ENST00000340650 PAK3O75914 559 aaPredicted RBP26.2■■□□□ 1.79
NHLRC1-201ENST00000340650 PNISRQ8TF01 805 aaKnown RBP26.2■■□□□ 1.79
NHLRC1-201ENST00000340650 ZMYM3Q14202 1370 aa26.2■■□□□ 1.78
NHLRC1-201ENST00000340650 VGFO15240 615 aaPredicted RBP26.2■■□□□ 1.78
NHLRC1-201ENST00000340650 TMEM131LA2VDJ0 1609 aa26.2■■□□□ 1.78
NHLRC1-201ENST00000340650 MYO5BQ9ULV0 1848 aa26.2■■□□□ 1.78
NHLRC1-201ENST00000340650 STAG3Q9UJ98 1225 aa26.19■■□□□ 1.78
NHLRC1-201ENST00000340650 C14orf93Q9H972 538 aaKnown RBP26.18■■□□□ 1.78
NHLRC1-201ENST00000340650 EIF3AQ14152 1382 aaKnown RBP26.18■■□□□ 1.78
NHLRC1-201ENST00000340650 TMEM132EQ6IEE7 984 aa26.18■■□□□ 1.78
NHLRC1-201ENST00000340650 SPATA31D1Q6ZQQ2 1576 aa26.17■■□□□ 1.78
NHLRC1-201ENST00000340650 IPO9Q96P70 1041 aaKnown RBP26.16■■□□□ 1.78
NHLRC1-201ENST00000340650 LRPPRCP42704 1394 aaKnown RBP26.15■■□□□ 1.78
NHLRC1-201ENST00000340650 ANP32AP39687 249 aaKnown RBP26.15■■□□□ 1.78
NHLRC1-201ENST00000340650 TRAK1Q9UPV9 953 aa26.13■■□□□ 1.77
NHLRC1-201ENST00000340650 SETBP1Q9Y6X0 1596 aa26.12■■□□□ 1.77
NHLRC1-201ENST00000340650 KTN1Q86UP2 1357 aaKnown RBP26.11■■□□□ 1.77
NHLRC1-201ENST00000340650 ADGRB1O14514 1584 aa26.11■■□□□ 1.77
NHLRC1-201ENST00000340650 TMC1Q8TDI8 760 aa26.11■■□□□ 1.77
NHLRC1-201ENST00000340650 BRD4O60885 1362 aaPredicted RBP26.09■■□□□ 1.77
NHLRC1-201ENST00000340650 ZFYVE9O95405 1425 aa26.08■■□□□ 1.76
NHLRC1-201ENST00000340650 A2ML1A8K2U0 1454 aa26.07■■□□□ 1.76
NHLRC1-201ENST00000340650 NBR1Q14596 966 aa26.07■■□□□ 1.76
NHLRC1-201ENST00000340650 PANK3Q9H999 370 aa26.05■■□□□ 1.76
NHLRC1-201ENST00000340650 CEBPAP49715 358 aaPredicted RBP26.04■■□□□ 1.76
NHLRC1-201ENST00000340650 PLPPR3Q6T4P5 718 aa26.04■■□□□ 1.76
NHLRC1-201ENST00000340650 MYBBP1AQ9BQG0 1328 aaKnown RBP26.04■■□□□ 1.76
NHLRC1-201ENST00000340650 CENPJQ9HC77 1338 aaPredicted RBP26.04■■□□□ 1.76
NHLRC1-201ENST00000340650 ZBTB47Q9UFB7 747 aaPredicted RBP26.03■■□□□ 1.76
NHLRC1-201ENST00000340650 TNRQ92752 1358 aa26.03■■□□□ 1.76
NHLRC1-201ENST00000340650 RALBP1Q15311 655 aa26.03■■□□□ 1.76
NHLRC1-201ENST00000340650 CDCA8Q53HL2 280 aa26.02■■□□□ 1.76
NHLRC1-201ENST00000340650 PER1O15534 1290 aaPredicted RBP26.01■■□□□ 1.75
NHLRC1-201ENST00000340650 RRP1P56182 461 aaKnown RBP26■■□□□ 1.75
NHLRC1-201ENST00000340650 RIMS2Q9UQ26 1411 aa26■■□□□ 1.75
NHLRC1-201ENST00000340650 STK26Q9P289 416 aa25.99■■□□□ 1.75
NHLRC1-201ENST00000340650 MYO3AQ8NEV4 1616 aa25.99■■□□□ 1.75
NHLRC1-201ENST00000340650 ASXL1Q8IXJ9 1541 aa25.97■■□□□ 1.75
NHLRC1-201ENST00000340650 TCERG1O14776 1098 aaKnown RBP25.95■■□□□ 1.75
NHLRC1-201ENST00000340650 SBNO2Q9Y2G9 1366 aa25.95■■□□□ 1.74
NHLRC1-201ENST00000340650 SLC24A1O60721 1099 aa25.94■■□□□ 1.74
NHLRC1-201ENST00000340650 SAFB2Q14151 953 aaKnown RBP eCLIP25.94■■□□□ 1.74
NHLRC1-201ENST00000340650 KDM5AP29375 1690 aaKnown RBP25.94■■□□□ 1.74
NHLRC1-201ENST00000340650 QRICH2Q9H0J4 1663 aa25.94■■□□□ 1.74
NHLRC1-201ENST00000340650 CC2D1BQ5T0F9 858 aaKnown RBP25.94■■□□□ 1.74
NHLRC1-201ENST00000340650 SENP3-EIF4A1A0A087X0R7 540 aa25.93■■□□□ 1.74
NHLRC1-201ENST00000340650 RTL5Q5HYW3 569 aaPredicted RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms