RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 PAK3O75914 559 aaPredicted RBP15.72■□□□□ 0.11
C2orf88-201ENST00000340623 NGDNQ8NEJ9 315 aaKnown RBP15.72■□□□□ 0.11
C2orf88-201ENST00000340623 CABP2Q9NPB3 220 aa15.72■□□□□ 0.11
C2orf88-201ENST00000340623 CCDC7Q96M83 1385 aa15.71■□□□□ 0.11
C2orf88-201ENST00000340623 MAGI2Q86UL8 1455 aa15.71■□□□□ 0.11
C2orf88-201ENST00000340623 MAST1Q9Y2H9 1570 aa15.71■□□□□ 0.11
C2orf88-201ENST00000340623 HAP1P54257 671 aaPredicted RBP15.71■□□□□ 0.11
C2orf88-201ENST00000340623 TERF2IPQ9NYB0 399 aa15.71■□□□□ 0.1
C2orf88-201ENST00000340623 DIP2BQ9P265 1576 aa15.7■□□□□ 0.1
C2orf88-201ENST00000340623 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.7■□□□□ 0.1
C2orf88-201ENST00000340623 NPATQ14207 1427 aa15.7■□□□□ 0.1
C2orf88-201ENST00000340623 AEBP2Q6ZN18 517 aaPredicted RBP15.69■□□□□ 0.1
C2orf88-201ENST00000340623 CFAP53Q96M91 514 aa15.69■□□□□ 0.1
C2orf88-201ENST00000340623 KTN1Q86UP2 1357 aaKnown RBP15.69■□□□□ 0.1
C2orf88-201ENST00000340623 CNTLNQ9NXG0 1405 aa15.67■□□□□ 0.1
C2orf88-201ENST00000340623 WAPLQ7Z5K2 1190 aa15.66■□□□□ 0.1
C2orf88-201ENST00000340623 PLXNC1O60486 1568 aa15.65■□□□□ 0.1
C2orf88-201ENST00000340623 U2SURPO15042 1029 aaKnown RBP15.64■□□□□ 0.09
C2orf88-201ENST00000340623 C11orf95C9JLR9 678 aaPredicted RBP15.64■□□□□ 0.09
C2orf88-201ENST00000340623 C14orf93Q9H972 538 aaKnown RBP15.64■□□□□ 0.09
C2orf88-201ENST00000340623 PROSER2Q86WR7 435 aaPredicted RBP15.64■□□□□ 0.09
C2orf88-201ENST00000340623 RBM33Q96EV2 1170 aaKnown RBP15.64■□□□□ 0.09
C2orf88-201ENST00000340623 CROCC2H7BZ55 1655 aa15.62■□□□□ 0.09
C2orf88-201ENST00000340623 GLI2P10070 1586 aa15.62■□□□□ 0.09
C2orf88-201ENST00000340623 HSPA2P54652 639 aa15.62■□□□□ 0.09
C2orf88-201ENST00000340623 NEUROD2Q15784 382 aa15.62■□□□□ 0.09
C2orf88-201ENST00000340623 SLC12A5Q9H2X9 1139 aa15.62■□□□□ 0.09
C2orf88-201ENST00000340623 COL17A1Q9UMD9 1497 aaPredicted RBP15.62■□□□□ 0.09
C2orf88-201ENST00000340623 RIMS2Q9UQ26 1411 aa15.61■□□□□ 0.09
C2orf88-201ENST00000340623 PRAG1Q86YV5 1406 aa15.61■□□□□ 0.09
C2orf88-201ENST00000340623 RALBP1Q15311 655 aa15.61■□□□□ 0.09
C2orf88-201ENST00000340623 PRKRIP1Q9H875 184 aaPredicted RBP15.6■□□□□ 0.09
C2orf88-201ENST00000340623 CCER2I3L3R5 266 aa15.59■□□□□ 0.09
C2orf88-201ENST00000340623 CDK19Q9BWU1 502 aa15.59■□□□□ 0.09
C2orf88-201ENST00000340623 UGGT1Q9NYU2 1555 aa15.59■□□□□ 0.09
C2orf88-201ENST00000340623 NUDCQ9Y266 331 aa15.59■□□□□ 0.09
C2orf88-201ENST00000340623 AMOTL2Q9Y2J4 779 aa15.59■□□□□ 0.09
C2orf88-201ENST00000340623 TSHZ2Q9NRE2 1034 aa15.59■□□□□ 0.09
C2orf88-201ENST00000340623 KDM5DQ9BY66 1539 aa15.58■□□□□ 0.08
C2orf88-201ENST00000340623 PMFBP1Q8TBY8 1022 aa15.57■□□□□ 0.08
C2orf88-201ENST00000340623 CGNL1Q0VF96 1302 aa15.56■□□□□ 0.08
C2orf88-201ENST00000340623 ATF3P18847 181 aa15.56■□□□□ 0.08
C2orf88-201ENST00000340623 ABCC3O15438 1527 aa15.56■□□□□ 0.08
C2orf88-201ENST00000340623 PLA2R1Q13018 1463 aa15.56■□□□□ 0.08
C2orf88-201ENST00000340623 NLRP13Q86W25 1043 aa15.55■□□□□ 0.08
C2orf88-201ENST00000340623 CABP1Q9NZU7 370 aa15.55■□□□□ 0.08
C2orf88-201ENST00000340623 INO80Q9ULG1 1556 aaPredicted RBP15.55■□□□□ 0.08
C2orf88-201ENST00000340623 PRDM15P57071 1507 aaPredicted RBP15.55■□□□□ 0.08
C2orf88-201ENST00000340623 DIP2CQ9Y2E4 1556 aa15.55■□□□□ 0.08
C2orf88-201ENST00000340623 KIDINS220Q9ULH0 1771 aa15.55■□□□□ 0.08
C2orf88-201ENST00000340623 GGNBP2Q9H3C7 697 aa15.54■□□□□ 0.08
C2orf88-201ENST00000340623 SCAF11Q99590 1463 aaKnown RBP15.54■□□□□ 0.08
C2orf88-201ENST00000340623 CANXP27824 592 aaKnown RBP15.54■□□□□ 0.08
C2orf88-201ENST00000340623 RALGAPBQ86X10 1494 aa15.53■□□□□ 0.08
C2orf88-201ENST00000340623 PSME1Q06323 249 aa15.53■□□□□ 0.08
C2orf88-201ENST00000340623 SUPT16HQ9Y5B9 1047 aaKnown RBP15.52■□□□□ 0.08
C2orf88-201ENST00000340623 MAPK8IP3Q9UPT6 1336 aa15.52■□□□□ 0.08
C2orf88-201ENST00000340623 ABCA6Q8N139 1617 aa15.52■□□□□ 0.08
C2orf88-201ENST00000340623 U2AF1L5P0DN76 240 aaPredicted RBP15.52■□□□□ 0.08
C2orf88-201ENST00000340623 U2AF1Q01081 240 aaKnown RBP eCLIP15.52■□□□□ 0.08
C2orf88-201ENST00000340623 ESCO1Q5FWF5 840 aa15.52■□□□□ 0.08
C2orf88-201ENST00000340623 NUTM2GQ5VZR2 741 aa15.52■□□□□ 0.07
C2orf88-201ENST00000340623 NCKAP5LQ9HCH0 1330 aa15.52■□□□□ 0.07
C2orf88-201ENST00000340623 COG3Q96JB2 828 aa15.51■□□□□ 0.07
C2orf88-201ENST00000340623 KDM5CP41229 1560 aa15.51■□□□□ 0.07
C2orf88-201ENST00000340623 MYBBP1AQ9BQG0 1328 aaKnown RBP15.51■□□□□ 0.07
C2orf88-201ENST00000340623 MAP3K4Q9Y6R4 1608 aa15.51■□□□□ 0.07
C2orf88-201ENST00000340623 IQGAP3Q86VI3 1631 aa15.5■□□□□ 0.07
C2orf88-201ENST00000340623 A0A0G2JS52 829 aa15.5■□□□□ 0.07
C2orf88-201ENST00000340623 LTKP29376 864 aa15.5■□□□□ 0.07
C2orf88-201ENST00000340623 EFCAB6Q5THR3 1501 aa15.5■□□□□ 0.07
C2orf88-201ENST00000340623 UNC13BO14795 1591 aa15.5■□□□□ 0.07
C2orf88-201ENST00000340623 PTPRTO14522 1441 aa15.49■□□□□ 0.07
C2orf88-201ENST00000340623 ERVK-7P63135 1459 aa15.49■□□□□ 0.07
C2orf88-201ENST00000340623 DISP3Q9P2K9 1392 aa15.49■□□□□ 0.07
C2orf88-201ENST00000340623 NUDT16Q96DE0 195 aaKnown RBP15.49■□□□□ 0.07
C2orf88-201ENST00000340623 TET3O43151 1660 aa15.49■□□□□ 0.07
C2orf88-201ENST00000340623 LTV1Q96GA3 475 aaPredicted RBP15.48■□□□□ 0.07
C2orf88-201ENST00000340623 TRPM2O94759 1503 aa15.48■□□□□ 0.07
C2orf88-201ENST00000340623 SPATA31E1Q6ZUB1 1445 aa15.48■□□□□ 0.07
C2orf88-201ENST00000340623 UHRF1BP1Q6BDS2 1440 aa15.48■□□□□ 0.07
C2orf88-201ENST00000340623 AMPHP49418 695 aa15.47■□□□□ 0.07
C2orf88-201ENST00000340623 TMEM2Q9UHN6 1383 aa15.47■□□□□ 0.07
C2orf88-201ENST00000340623 CCDC61Q9Y6R9 512 aa15.47■□□□□ 0.07
C2orf88-201ENST00000340623 CCDC146Q8IYE0 955 aa15.46■□□□□ 0.06
C2orf88-201ENST00000340623 WASLO00401 505 aaPredicted RBP15.45■□□□□ 0.06
C2orf88-201ENST00000340623 ATAD2Q6PL18 1390 aa15.45■□□□□ 0.06
C2orf88-201ENST00000340623 TESK2Q96S53 571 aa15.45■□□□□ 0.06
C2orf88-201ENST00000340623 LAS1LQ9Y4W2 734 aaKnown RBP15.45■□□□□ 0.06
C2orf88-201ENST00000340623 ARHGAP31Q2M1Z3 1444 aa15.44■□□□□ 0.06
C2orf88-201ENST00000340623 NLRP6P59044 892 aa15.44■□□□□ 0.06
C2orf88-201ENST00000340623 XPCQ01831 940 aaPredicted RBP15.44■□□□□ 0.06
C2orf88-201ENST00000340623 KCNA6P17658 529 aa15.44■□□□□ 0.06
C2orf88-201ENST00000340623 CEP152O94986 1710 aa15.44■□□□□ 0.06
C2orf88-201ENST00000340623 CSB-PGBD3P0DP91 1061 aa15.43■□□□□ 0.06
C2orf88-201ENST00000340623 EIF2AK4Q9P2K8 1649 aaKnown RBP15.43■□□□□ 0.06
C2orf88-201ENST00000340623 TBX22Q9Y458 520 aa15.42■□□□□ 0.06
C2orf88-201ENST00000340623 ARHGEF40Q8TER5 1519 aa15.42■□□□□ 0.06
C2orf88-201ENST00000340623 ABTB2Q8N961 1025 aa15.41■□□□□ 0.06
C2orf88-201ENST00000340623 YTHDC2Q9H6S0 1430 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms