RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 MYO5BQ9ULV0 1848 aa25.18■■□□□ 1.62
H3F3C-201ENST00000340398 RPRD2Q5VT52 1461 aaKnown RBP25.17■■□□□ 1.62
H3F3C-201ENST00000340398 ITGAEP38570 1179 aa25.17■■□□□ 1.62
H3F3C-201ENST00000340398 NUTM2DQ5VT03 806 aaPredicted RBP25.15■■□□□ 1.62
H3F3C-201ENST00000340398 FAM135BQ49AJ0 1406 aa25.14■■□□□ 1.62
H3F3C-201ENST00000340398 PPP1R15AO75807 674 aaPredicted RBP25.14■■□□□ 1.62
H3F3C-201ENST00000340398 ZFYVE9O95405 1425 aa25.13■■□□□ 1.61
H3F3C-201ENST00000340398 RIMS2Q9UQ26 1411 aa25.13■■□□□ 1.61
H3F3C-201ENST00000340398 RGS17Q9UGC6 210 aaPredicted RBP25.12■■□□□ 1.61
H3F3C-201ENST00000340398 GCC2Q8IWJ2 1684 aa25.11■■□□□ 1.61
H3F3C-201ENST00000340398 HDGFP51858 240 aaKnown RBP25.11■■□□□ 1.61
H3F3C-201ENST00000340398 TMEM131LA2VDJ0 1609 aa25.11■■□□□ 1.61
H3F3C-201ENST00000340398 PLEKHG1Q9ULL1 1385 aa25.1■■□□□ 1.61
H3F3C-201ENST00000340398 UNC13BO14795 1591 aa25.1■■□□□ 1.61
H3F3C-201ENST00000340398 ROCK1Q13464 1354 aa25.09■■□□□ 1.61
H3F3C-201ENST00000340398 E9PCH4 1651 aa25.08■■□□□ 1.61
H3F3C-201ENST00000340398 TBX22Q9Y458 520 aa25.07■■□□□ 1.6
H3F3C-201ENST00000340398 NUP155O75694 1391 aa25.06■■□□□ 1.6
H3F3C-201ENST00000340398 NWD1Q149M9 1564 aa25.06■■□□□ 1.6
H3F3C-201ENST00000340398 SLAIN2Q9P270 581 aa25.06■■□□□ 1.6
H3F3C-201ENST00000340398 CHD2O14647 1828 aaKnown RBP25.06■■□□□ 1.6
H3F3C-201ENST00000340398 ROBO1Q9Y6N7 1651 aa25.06■■□□□ 1.6
H3F3C-201ENST00000340398 NKTRP30414 1462 aaKnown RBP25.05■■□□□ 1.6
H3F3C-201ENST00000340398 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.05■■□□□ 1.6
H3F3C-201ENST00000340398 MSH6P52701 1360 aa25.05■■□□□ 1.6
H3F3C-201ENST00000340398 IQGAP3Q86VI3 1631 aa25.01■■□□□ 1.59
H3F3C-201ENST00000340398 ADAMTS13Q76LX8 1427 aa25■■□□□ 1.59
H3F3C-201ENST00000340398 POTEAQ6S8J7 498 aa24.97■■□□□ 1.59
H3F3C-201ENST00000340398 C14orf37Q86TY3 774 aa24.97■■□□□ 1.59
H3F3C-201ENST00000340398 AMOTL2Q9Y2J4 779 aa24.94■■□□□ 1.58
H3F3C-201ENST00000340398 C19orf44Q9H6X5 657 aa24.91■■□□□ 1.58
H3F3C-201ENST00000340398 PHLPP1O60346 1717 aa24.91■■□□□ 1.58
H3F3C-201ENST00000340398 PTPRUQ92729 1446 aa24.9■■□□□ 1.58
H3F3C-201ENST00000340398 NCOA3Q9Y6Q9 1424 aa24.89■■□□□ 1.58
H3F3C-201ENST00000340398 ZNF326Q5BKZ1 582 aaKnown RBP24.89■■□□□ 1.58
H3F3C-201ENST00000340398 ATF3P18847 181 aa24.88■■□□□ 1.57
H3F3C-201ENST00000340398 PIK3R4Q99570 1358 aa24.88■■□□□ 1.57
H3F3C-201ENST00000340398 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.87■■□□□ 1.57
H3F3C-201ENST00000340398 CADPS2Q86UW7 1296 aa24.87■■□□□ 1.57
H3F3C-201ENST00000340398 JCADQ9P266 1359 aa24.86■■□□□ 1.57
H3F3C-201ENST00000340398 DIP2AQ14689 1571 aa24.85■■□□□ 1.57
H3F3C-201ENST00000340398 SPHKAPQ2M3C7 1700 aa24.83■■□□□ 1.57
H3F3C-201ENST00000340398 TRPM2O94759 1503 aa24.83■■□□□ 1.57
H3F3C-201ENST00000340398 COL16A1Q07092 1604 aaPredicted RBP24.81■■□□□ 1.56
H3F3C-201ENST00000340398 METP08581 1390 aa24.8■■□□□ 1.56
H3F3C-201ENST00000340398 NRXN3Q9Y4C0 1643 aa24.8■■□□□ 1.56
H3F3C-201ENST00000340398 BRINP3Q76B58 766 aa24.79■■□□□ 1.56
H3F3C-201ENST00000340398 NAIPQ13075 1403 aa24.78■■□□□ 1.56
H3F3C-201ENST00000340398 RRBP1Q9P2E9 1410 aaKnown RBP24.78■■□□□ 1.56
H3F3C-201ENST00000340398 TRIM52Q96A61 297 aa24.76■■□□□ 1.55
H3F3C-201ENST00000340398 SETBP1Q9Y6X0 1596 aa24.76■■□□□ 1.55
H3F3C-201ENST00000340398 CLTCL1P53675 1640 aa24.75■■□□□ 1.55
H3F3C-201ENST00000340398 LRP6O75581 1613 aa24.74■■□□□ 1.55
H3F3C-201ENST00000340398 SPATA31A6Q5VVP1 1343 aa24.73■■□□□ 1.55
H3F3C-201ENST00000340398 MEX3CQ5U5Q3 659 aaKnown RBP24.73■■□□□ 1.55
H3F3C-201ENST00000340398 XRN1Q8IZH2 1706 aaKnown RBP24.72■■□□□ 1.55
H3F3C-201ENST00000340398 AHDC1Q5TGY3 1603 aaPredicted RBP24.72■■□□□ 1.55
H3F3C-201ENST00000340398 NEXMIFQ5QGS0 1516 aa24.71■■□□□ 1.55
H3F3C-201ENST00000340398 NUTM2BA6NNL0 878 aaPredicted RBP24.71■■□□□ 1.55
H3F3C-201ENST00000340398 NUTM2EB1AL46 878 aaPredicted RBP24.71■■□□□ 1.55
H3F3C-201ENST00000340398 NUTM2AQ8IVF1 878 aaPredicted RBP24.71■■□□□ 1.55
H3F3C-201ENST00000340398 DDX17Q92841 729 aaKnown RBP24.7■■□□□ 1.54
H3F3C-201ENST00000340398 KIF1BO60333 1816 aa24.68■■□□□ 1.54
H3F3C-201ENST00000340398 MST1RQ04912 1400 aa24.68■■□□□ 1.54
H3F3C-201ENST00000340398 SLC4A1APQ9BWU0 796 aaKnown RBP24.67■■□□□ 1.54
H3F3C-201ENST00000340398 DCCP43146 1447 aa24.67■■□□□ 1.54
H3F3C-201ENST00000340398 SETD1AO15047 1707 aaKnown RBP24.65■■□□□ 1.54
H3F3C-201ENST00000340398 SHPRHQ149N8 1683 aa24.65■■□□□ 1.54
H3F3C-201ENST00000340398 ASXL1Q8IXJ9 1541 aa24.65■■□□□ 1.54
H3F3C-201ENST00000340398 VGFO15240 615 aaPredicted RBP24.64■■□□□ 1.54
H3F3C-201ENST00000340398 FOXD1Q16676 465 aa24.64■■□□□ 1.54
H3F3C-201ENST00000340398 ZNF772Q68DY9 489 aaPredicted RBP24.64■■□□□ 1.54
H3F3C-201ENST00000340398 HFM1A2PYH4 1435 aa24.61■■□□□ 1.53
H3F3C-201ENST00000340398 ADGRL3Q9HAR2 1447 aa24.61■■□□□ 1.53
H3F3C-201ENST00000340398 LRRC59Q96AG4 307 aaKnown RBP24.6■■□□□ 1.53
H3F3C-201ENST00000340398 SETD5Q9C0A6 1442 aa24.6■■□□□ 1.53
H3F3C-201ENST00000340398 NALCNQ8IZF0 1738 aa24.59■■□□□ 1.53
H3F3C-201ENST00000340398 ROBO2Q9HCK4 1378 aa24.58■■□□□ 1.53
H3F3C-201ENST00000340398 NHSL1Q5SYE7 1610 aa24.57■■□□□ 1.52
H3F3C-201ENST00000340398 RPGRIP1LQ68CZ1 1315 aa24.57■■□□□ 1.52
H3F3C-201ENST00000340398 RXRBP28702 533 aa24.56■■□□□ 1.52
H3F3C-201ENST00000340398 ORAI2Q96SN7 254 aa24.56■■□□□ 1.52
H3F3C-201ENST00000340398 AFF2P51816 1311 aa24.55■■□□□ 1.52
H3F3C-201ENST00000340398 C1orf167Q5SNV9 1468 aa24.53■■□□□ 1.52
H3F3C-201ENST00000340398 RGL3Q3MIN7 710 aa24.52■■□□□ 1.52
H3F3C-201ENST00000340398 C8orf37Q96NL8 207 aa24.52■■□□□ 1.52
H3F3C-201ENST00000340398 UPF1Q92900 1129 aaKnown RBP eCLIP24.51■■□□□ 1.51
H3F3C-201ENST00000340398 PNPLA6Q8IY17 1366 aa24.51■■□□□ 1.51
H3F3C-201ENST00000340398 ADGRF5Q8IZF2 1346 aa24.5■■□□□ 1.51
H3F3C-201ENST00000340398 PTCH1Q13635 1447 aa24.5■■□□□ 1.51
H3F3C-201ENST00000340398 PPLO60437 1756 aa24.49■■□□□ 1.51
H3F3C-201ENST00000340398 ADAMTS2O95450 1211 aa24.49■■□□□ 1.51
H3F3C-201ENST00000340398 QTRT2Q9H974 415 aaKnown RBP24.48■■□□□ 1.51
H3F3C-201ENST00000340398 MPHOSPH9Q99550 1183 aa24.47■■□□□ 1.51
H3F3C-201ENST00000340398 STK26Q9P289 416 aa24.47■■□□□ 1.51
H3F3C-201ENST00000340398 SOS2Q07890 1332 aaPredicted RBP24.45■■□□□ 1.5
H3F3C-201ENST00000340398 WAPLQ7Z5K2 1190 aa24.45■■□□□ 1.5
H3F3C-201ENST00000340398 NGLY1Q96IV0 654 aa24.45■■□□□ 1.5
H3F3C-201ENST00000340398 TMEM132EQ6IEE7 984 aa24.43■■□□□ 1.5
H3F3C-201ENST00000340398 ESCO1Q5FWF5 840 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms