RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 NEURL4Q96JN8 1562 aa21.09■□□□□ 0.97
CSRP1-201ENST00000340006 SENP3Q9H4L4 574 aaPredicted RBP21.09■□□□□ 0.97
CSRP1-201ENST00000340006 CEP170BQ9Y4F5 1589 aaPredicted RBP21.09■□□□□ 0.97
CSRP1-201ENST00000340006 EID1Q9Y6B2 187 aa21.08■□□□□ 0.96
CSRP1-201ENST00000340006 KDM5AP29375 1690 aaKnown RBP21.07■□□□□ 0.96
CSRP1-201ENST00000340006 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.07■□□□□ 0.96
CSRP1-201ENST00000340006 TXNDC2Q86VQ3 553 aa21.06■□□□□ 0.96
CSRP1-201ENST00000340006 BCANQ96GW7 911 aa21.06■□□□□ 0.96
CSRP1-201ENST00000340006 RIMS2Q9UQ26 1411 aa21.05■□□□□ 0.96
CSRP1-201ENST00000340006 TMEM2Q9UHN6 1383 aa21.05■□□□□ 0.96
CSRP1-201ENST00000340006 PPLO60437 1756 aa21.04■□□□□ 0.96
CSRP1-201ENST00000340006 ADGRF5Q8IZF2 1346 aa21.04■□□□□ 0.96
CSRP1-201ENST00000340006 NBPF8Q3BBV2 869 aa21.03■□□□□ 0.96
CSRP1-201ENST00000340006 ZNF142P52746 1687 aaPredicted RBP21.02■□□□□ 0.96
CSRP1-201ENST00000340006 ANKLE2Q86XL3 938 aa21.02■□□□□ 0.96
CSRP1-201ENST00000340006 NEXMIFQ5QGS0 1516 aa21.02■□□□□ 0.96
CSRP1-201ENST00000340006 LTKP29376 864 aa21.01■□□□□ 0.95
CSRP1-201ENST00000340006 IFT172Q9UG01 1749 aa21.01■□□□□ 0.95
CSRP1-201ENST00000340006 HSPA2P54652 639 aa20.99■□□□□ 0.95
CSRP1-201ENST00000340006 ZFYVE9O95405 1425 aa20.97■□□□□ 0.95
CSRP1-201ENST00000340006 PRAG1Q86YV5 1406 aa20.97■□□□□ 0.95
CSRP1-201ENST00000340006 MYOM2P54296 1465 aa20.97■□□□□ 0.95
CSRP1-201ENST00000340006 CFAP70Q5T0N1 1121 aa20.96■□□□□ 0.95
CSRP1-201ENST00000340006 SLIT1O75093 1534 aa20.96■□□□□ 0.95
CSRP1-201ENST00000340006 ARHGAP23Q9P227 1491 aa20.94■□□□□ 0.94
CSRP1-201ENST00000340006 NCKAP5LQ9HCH0 1330 aa20.94■□□□□ 0.94
CSRP1-201ENST00000340006 NBPF1Q3BBV0 1214 aa20.93■□□□□ 0.94
CSRP1-201ENST00000340006 C14orf93Q9H972 538 aaKnown RBP20.92■□□□□ 0.94
CSRP1-201ENST00000340006 LMTK3Q96Q04 1460 aa20.92■□□□□ 0.94
CSRP1-201ENST00000340006 SCAF11Q99590 1463 aaKnown RBP20.92■□□□□ 0.94
CSRP1-201ENST00000340006 ROCK2O75116 1388 aaKnown RBP20.91■□□□□ 0.94
CSRP1-201ENST00000340006 PIK3C2GO75747 1445 aa20.9■□□□□ 0.94
CSRP1-201ENST00000340006 CARD11Q9BXL7 1154 aa20.9■□□□□ 0.94
CSRP1-201ENST00000340006 NRXN1Q9ULB1 1477 aa20.9■□□□□ 0.94
CSRP1-201ENST00000340006 SLC26A8Q96RN1 970 aa20.9■□□□□ 0.94
CSRP1-201ENST00000340006 PLEKHG1Q9ULL1 1385 aa20.89■□□□□ 0.93
CSRP1-201ENST00000340006 TMEM132EQ6IEE7 984 aa20.89■□□□□ 0.93
CSRP1-201ENST00000340006 TRPM1Q7Z4N2 1603 aa20.87■□□□□ 0.93
CSRP1-201ENST00000340006 ALKQ9UM73 1620 aa20.84■□□□□ 0.93
CSRP1-201ENST00000340006 POLR1AO95602 1720 aaPredicted RBP20.84■□□□□ 0.93
CSRP1-201ENST00000340006 KIAA1210Q9ULL0 1709 aa20.84■□□□□ 0.93
CSRP1-201ENST00000340006 RALGAPBQ86X10 1494 aa20.84■□□□□ 0.93
CSRP1-201ENST00000340006 STK26Q9P289 416 aa20.83■□□□□ 0.93
CSRP1-201ENST00000340006 TBX22Q9Y458 520 aa20.83■□□□□ 0.93
CSRP1-201ENST00000340006 NPHP4O75161 1426 aaPredicted RBP20.82■□□□□ 0.92
CSRP1-201ENST00000340006 IQGAP1P46940 1657 aa20.82■□□□□ 0.92
CSRP1-201ENST00000340006 SETBP1Q9Y6X0 1596 aa20.81■□□□□ 0.92
CSRP1-201ENST00000340006 LAMC1P11047 1609 aa20.81■□□□□ 0.92
CSRP1-201ENST00000340006 EIF4G2P78344 907 aaKnown RBP eCLIP20.81■□□□□ 0.92
CSRP1-201ENST00000340006 TRAK1Q9UPV9 953 aa20.81■□□□□ 0.92
CSRP1-201ENST00000340006 ADAMTS13Q76LX8 1427 aa20.79■□□□□ 0.92
CSRP1-201ENST00000340006 NRXN3Q9Y4C0 1643 aa20.79■□□□□ 0.92
CSRP1-201ENST00000340006 HIRIP3Q9BW71 556 aaPredicted RBP20.79■□□□□ 0.92
CSRP1-201ENST00000340006 MED14O60244 1454 aa20.79■□□□□ 0.92
CSRP1-201ENST00000340006 METP08581 1390 aa20.78■□□□□ 0.92
CSRP1-201ENST00000340006 STRCQ7RTU9 1775 aa20.77■□□□□ 0.92
CSRP1-201ENST00000340006 DMRT2Q9Y5R5 561 aa20.76■□□□□ 0.91
CSRP1-201ENST00000340006 GPRASP1Q5JY77 1395 aa20.76■□□□□ 0.91
CSRP1-201ENST00000340006 HSPA5P11021 654 aaKnown RBP20.75■□□□□ 0.91
CSRP1-201ENST00000340006 USP47Q96K76 1375 aa20.74■□□□□ 0.91
CSRP1-201ENST00000340006 AMOTL2Q9Y2J4 779 aa20.74■□□□□ 0.91
CSRP1-201ENST00000340006 YTHDC2Q9H6S0 1430 aaKnown RBP20.73■□□□□ 0.91
CSRP1-201ENST00000340006 ST20-MTHFSA0A0A6YYL1 179 aa20.73■□□□□ 0.91
CSRP1-201ENST00000340006 SETD1AO15047 1707 aaKnown RBP20.73■□□□□ 0.91
CSRP1-201ENST00000340006 ADGRB1O14514 1584 aa20.73■□□□□ 0.91
CSRP1-201ENST00000340006 POGKQ9P215 609 aa20.72■□□□□ 0.91
CSRP1-201ENST00000340006 DIP2AQ14689 1571 aa20.72■□□□□ 0.91
CSRP1-201ENST00000340006 LRPPRCP42704 1394 aaKnown RBP20.7■□□□□ 0.9
CSRP1-201ENST00000340006 EIF3AQ14152 1382 aaKnown RBP20.7■□□□□ 0.9
CSRP1-201ENST00000340006 SAFB2Q14151 953 aaKnown RBP eCLIP20.7■□□□□ 0.9
CSRP1-201ENST00000340006 ASXL1Q8IXJ9 1541 aa20.69■□□□□ 0.9
CSRP1-201ENST00000340006 PIK3R4Q99570 1358 aa20.69■□□□□ 0.9
CSRP1-201ENST00000340006 ZNF316A6NFI3 1004 aaPredicted RBP20.68■□□□□ 0.9
CSRP1-201ENST00000340006 WAPLQ7Z5K2 1190 aa20.68■□□□□ 0.9
CSRP1-201ENST00000340006 PRAM1Q96QH2 718 aa20.68■□□□□ 0.9
CSRP1-201ENST00000340006 ABCC11Q96J66 1382 aa20.68■□□□□ 0.9
CSRP1-201ENST00000340006 KCNA6P17658 529 aa20.66■□□□□ 0.9
CSRP1-201ENST00000340006 CENPJQ9HC77 1338 aaPredicted RBP20.66■□□□□ 0.9
CSRP1-201ENST00000340006 PTPRUQ92729 1446 aa20.66■□□□□ 0.9
CSRP1-201ENST00000340006 CHD2O14647 1828 aaKnown RBP20.66■□□□□ 0.9
CSRP1-201ENST00000340006 SIRT1Q96EB6 747 aa20.63■□□□□ 0.89
CSRP1-201ENST00000340006 ARHGEF28Q8N1W1 1705 aaKnown RBP20.61■□□□□ 0.89
CSRP1-201ENST00000340006 PROSER2Q86WR7 435 aaPredicted RBP20.61■□□□□ 0.89
CSRP1-201ENST00000340006 SLC24A1O60721 1099 aa20.61■□□□□ 0.89
CSRP1-201ENST00000340006 ROBO2Q9HCK4 1378 aa20.6■□□□□ 0.89
CSRP1-201ENST00000340006 RBM33Q96EV2 1170 aaKnown RBP20.6■□□□□ 0.89
CSRP1-201ENST00000340006 MINK1Q8N4C8 1332 aaPredicted RBP20.6■□□□□ 0.89
CSRP1-201ENST00000340006 TMF1P82094 1093 aa20.59■□□□□ 0.89
CSRP1-201ENST00000340006 POLR3GLQ9BT43 218 aa20.59■□□□□ 0.89
CSRP1-201ENST00000340006 C14orf37Q86TY3 774 aa20.58■□□□□ 0.89
CSRP1-201ENST00000340006 TESK2Q96S53 571 aa20.58■□□□□ 0.89
CSRP1-201ENST00000340006 ZNF335Q9H4Z2 1342 aaPredicted RBP20.58■□□□□ 0.89
CSRP1-201ENST00000340006 PLEKHH1Q9ULM0 1364 aa20.58■□□□□ 0.89
CSRP1-201ENST00000340006 TECPR2O15040 1411 aa20.58■□□□□ 0.89
CSRP1-201ENST00000340006 DLC1Q96QB1 1528 aa20.58■□□□□ 0.89
CSRP1-201ENST00000340006 KNDC1Q76NI1 1749 aa20.58■□□□□ 0.89
CSRP1-201ENST00000340006 FAM135BQ49AJ0 1406 aa20.57■□□□□ 0.88
CSRP1-201ENST00000340006 QRICH2Q9H0J4 1663 aa20.56■□□□□ 0.88
CSRP1-201ENST00000340006 XRN1Q8IZH2 1706 aaKnown RBP20.56■□□□□ 0.88
CSRP1-201ENST00000340006 CPS1P31327 1500 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms