RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 CDK11BP21127 795 aaKnown RBP11.87□□□□□ -0.51
RPGR-202ENST00000339363 RALBP1Q15311 655 aa11.87□□□□□ -0.51
RPGR-202ENST00000339363 C8orf34Q49A92 452 aa11.87□□□□□ -0.51
RPGR-202ENST00000339363 KDM2BQ8NHM5 1336 aa11.87□□□□□ -0.51
RPGR-202ENST00000339363 ADGRL2O95490 1459 aa11.87□□□□□ -0.51
RPGR-202ENST00000339363 KDM5DQ9BY66 1539 aa11.87□□□□□ -0.51
RPGR-202ENST00000339363 CROCC2H7BZ55 1655 aa11.87□□□□□ -0.51
RPGR-202ENST00000339363 CCDC146Q8IYE0 955 aa11.87□□□□□ -0.51
RPGR-202ENST00000339363 ANKRD30AQ9BXX3 1397 aa11.86□□□□□ -0.51
RPGR-202ENST00000339363 SEC24BO95487 1268 aa11.86□□□□□ -0.51
RPGR-202ENST00000339363 PRAG1Q86YV5 1406 aa11.85□□□□□ -0.51
RPGR-202ENST00000339363 ADGBQ8N7X0 1667 aa11.85□□□□□ -0.51
RPGR-202ENST00000339363 KTN1Q86UP2 1357 aaKnown RBP11.85□□□□□ -0.51
RPGR-202ENST00000339363 ZBTB7CA1YPR0 619 aa11.84□□□□□ -0.51
RPGR-202ENST00000339363 CEP170Q5SW79 1584 aa11.84□□□□□ -0.51
RPGR-202ENST00000339363 BCAR3O75815 825 aa11.84□□□□□ -0.51
RPGR-202ENST00000339363 DUSP27Q5VZP5 1158 aa11.84□□□□□ -0.51
RPGR-202ENST00000339363 MRE11P49959 708 aa11.83□□□□□ -0.51
RPGR-202ENST00000339363 MAGI2Q86UL8 1455 aa11.83□□□□□ -0.52
RPGR-202ENST00000339363 MAGI1Q96QZ7 1491 aaPredicted RBP11.83□□□□□ -0.52
RPGR-202ENST00000339363 A2MP01023 1474 aa11.83□□□□□ -0.52
RPGR-202ENST00000339363 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
RPGR-202ENST00000339363 R3HCC1Q9Y3T6 440 aaKnown RBP11.83□□□□□ -0.52
RPGR-202ENST00000339363 BLMP54132 1417 aaPredicted RBP11.82□□□□□ -0.52
RPGR-202ENST00000339363 IGHDP01880 384 aa11.82□□□□□ -0.52
RPGR-202ENST00000339363 CHMP4BQ9H444 224 aaKnown RBP11.82□□□□□ -0.52
RPGR-202ENST00000339363 TRPM1Q7Z4N2 1603 aa11.81□□□□□ -0.52
RPGR-202ENST00000339363 ABCC10Q5T3U5 1492 aa11.81□□□□□ -0.52
RPGR-202ENST00000339363 TNNQ9UQP3 1299 aa11.81□□□□□ -0.52
RPGR-202ENST00000339363 ATP10BO94823 1461 aa11.81□□□□□ -0.52
RPGR-202ENST00000339363 JPH4Q96JJ6 628 aa11.8□□□□□ -0.52
RPGR-202ENST00000339363 FAM135AQ9P2D6 1515 aa11.8□□□□□ -0.52
RPGR-202ENST00000339363 USP19O94966 1318 aa11.79□□□□□ -0.52
RPGR-202ENST00000339363 PTPRGP23470 1445 aa11.79□□□□□ -0.52
RPGR-202ENST00000339363 MAP7D2Q96T17 732 aa11.79□□□□□ -0.52
RPGR-202ENST00000339363 ADCY10Q96PN6 1610 aa11.79□□□□□ -0.52
RPGR-202ENST00000339363 NAP1L2Q9ULW6 460 aaPredicted RBP11.79□□□□□ -0.52
RPGR-202ENST00000339363 ARHGEF12Q9NZN5 1544 aa11.79□□□□□ -0.52
RPGR-202ENST00000339363 TRAK2O60296 914 aa11.79□□□□□ -0.52
RPGR-202ENST00000339363 GRPEL1Q9HAV7 217 aa11.79□□□□□ -0.52
RPGR-202ENST00000339363 COL17A1Q9UMD9 1497 aaPredicted RBP11.78□□□□□ -0.52
RPGR-202ENST00000339363 DNTTIP2Q5QJE6 756 aaKnown RBP11.78□□□□□ -0.52
RPGR-202ENST00000339363 CENPQQ7L2Z9 268 aaPredicted RBP11.78□□□□□ -0.52
RPGR-202ENST00000339363 CHMP7Q8WUX9 453 aaPredicted RBP11.78□□□□□ -0.52
RPGR-202ENST00000339363 PPP2R1AP30153 589 aa11.78□□□□□ -0.52
RPGR-202ENST00000339363 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.78□□□□□ -0.52
RPGR-202ENST00000339363 ZNF521Q96K83 1311 aa11.77□□□□□ -0.52
RPGR-202ENST00000339363 TSPY4P0CV99 314 aa11.77□□□□□ -0.53
RPGR-202ENST00000339363 TSPY10P0CW01 314 aa11.77□□□□□ -0.53
RPGR-202ENST00000339363 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.77□□□□□ -0.53
RPGR-202ENST00000339363 MAPK8IP2Q13387 824 aaPredicted RBP11.76□□□□□ -0.53
RPGR-202ENST00000339363 ERBINQ96RT1 1412 aa11.76□□□□□ -0.53
RPGR-202ENST00000339363 PLEKHD1A6NEE1 506 aa11.76□□□□□ -0.53
RPGR-202ENST00000339363 AEBP2Q6ZN18 517 aaPredicted RBP11.76□□□□□ -0.53
RPGR-202ENST00000339363 ITSN2Q9NZM3 1697 aa11.76□□□□□ -0.53
RPGR-202ENST00000339363 ZMYM4Q5VZL5 1548 aa11.76□□□□□ -0.53
RPGR-202ENST00000339363 WDR7Q9Y4E6 1490 aa11.76□□□□□ -0.53
RPGR-202ENST00000339363 PDE3BQ13370 1112 aa11.75□□□□□ -0.53
RPGR-202ENST00000339363 CCDC144AA2RUR9 1427 aa11.75□□□□□ -0.53
RPGR-202ENST00000339363 PLCD3Q8N3E9 789 aa11.75□□□□□ -0.53
RPGR-202ENST00000339363 APAF1O14727 1248 aa11.75□□□□□ -0.53
RPGR-202ENST00000339363 PLEKHH2Q8IVE3 1493 aa11.75□□□□□ -0.53
RPGR-202ENST00000339363 SAMD9LQ8IVG5 1584 aa11.74□□□□□ -0.53
RPGR-202ENST00000339363 MCM4P33991 863 aa11.74□□□□□ -0.53
RPGR-202ENST00000339363 ABCA8O94911 1581 aa11.74□□□□□ -0.53
RPGR-202ENST00000339363 PANK1Q8TE04 598 aa11.74□□□□□ -0.53
RPGR-202ENST00000339363 PAXIP1Q6ZW49 1069 aaPredicted RBP11.73□□□□□ -0.53
RPGR-202ENST00000339363 PRDM4Q9UKN5 801 aa11.73□□□□□ -0.53
RPGR-202ENST00000339363 PRDM15P57071 1507 aaPredicted RBP11.72□□□□□ -0.53
RPGR-202ENST00000339363 UQCRHLA0A096LP55 91 aa11.72□□□□□ -0.53
RPGR-202ENST00000339363 UQCRHP07919 91 aa11.72□□□□□ -0.53
RPGR-202ENST00000339363 GPRASP1Q5JY77 1395 aa11.72□□□□□ -0.53
RPGR-202ENST00000339363 SHROOM2Q13796 1616 aa11.72□□□□□ -0.53
RPGR-202ENST00000339363 SLFN5Q08AF3 891 aa11.72□□□□□ -0.53
RPGR-202ENST00000339363 VGLL3A8MV65 326 aa11.71□□□□□ -0.53
RPGR-202ENST00000339363 RRP7AQ9Y3A4 280 aaKnown RBP11.71□□□□□ -0.53
RPGR-202ENST00000339363 BCL2L13Q9BXK5 485 aa11.71□□□□□ -0.53
RPGR-202ENST00000339363 MYO5CQ9NQX4 1742 aa11.71□□□□□ -0.54
RPGR-202ENST00000339363 SYNJ2O15056 1496 aa11.71□□□□□ -0.54
RPGR-202ENST00000339363 CDC42BPBQ9Y5S2 1711 aa11.71□□□□□ -0.54
RPGR-202ENST00000339363 SYCP2Q9BX26 1530 aa11.7□□□□□ -0.54
RPGR-202ENST00000339363 CARD14Q9BXL6 1004 aa11.7□□□□□ -0.54
RPGR-202ENST00000339363 COG6Q9Y2V7 657 aa11.7□□□□□ -0.54
RPGR-202ENST00000339363 PTMAP06454 111 aaKnown RBP11.7□□□□□ -0.54
RPGR-202ENST00000339363 RLBP1P12271 317 aa11.7□□□□□ -0.54
RPGR-202ENST00000339363 NEUROD2Q15784 382 aa11.7□□□□□ -0.54
RPGR-202ENST00000339363 TAF7LQ5H9L4 462 aa11.69□□□□□ -0.54
RPGR-202ENST00000339363 DDX11L8A8MPP1 907 aa11.69□□□□□ -0.54
RPGR-202ENST00000339363 GOLGA2Q08379 1002 aa11.69□□□□□ -0.54
RPGR-202ENST00000339363 SMAP1Q8IYB5 467 aaPredicted RBP11.69□□□□□ -0.54
RPGR-202ENST00000339363 ERBB4Q15303 1308 aa11.69□□□□□ -0.54
RPGR-202ENST00000339363 CENPJQ9HC77 1338 aaPredicted RBP11.69□□□□□ -0.54
RPGR-202ENST00000339363 MTERF4Q7Z6M4 381 aaKnown RBP11.68□□□□□ -0.54
RPGR-202ENST00000339363 SHANK2Q9UPX8 1470 aa11.68□□□□□ -0.54
RPGR-202ENST00000339363 TRMT2AQ8IZ69 625 aaKnown RBP11.68□□□□□ -0.54
RPGR-202ENST00000339363 TMF1P82094 1093 aa11.68□□□□□ -0.54
RPGR-202ENST00000339363 SENP3Q9H4L4 574 aaPredicted RBP11.68□□□□□ -0.54
RPGR-202ENST00000339363 CHMP5Q9NZZ3 219 aa11.68□□□□□ -0.54
RPGR-202ENST00000339363 GOLGA6L22H0YM25 854 aa11.67□□□□□ -0.54
RPGR-202ENST00000339363 ZSCAN30Q86W11 494 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms