RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 SYCP2Q9BX26 1530 aa16.27■□□□□ 0.2
DFFB-202ENST00000339350 ADCY10Q96PN6 1610 aa16.27■□□□□ 0.19
DFFB-202ENST00000339350 PER1O15534 1290 aaPredicted RBP16.27■□□□□ 0.19
DFFB-202ENST00000339350 TTC37Q6PGP7 1564 aa16.27■□□□□ 0.19
DFFB-202ENST00000339350 DISP3Q9P2K9 1392 aa16.26■□□□□ 0.19
DFFB-202ENST00000339350 STAC3Q96MF2 364 aa16.26■□□□□ 0.19
DFFB-202ENST00000339350 PLPPR3Q6T4P5 718 aa16.25■□□□□ 0.19
DFFB-202ENST00000339350 SAMD9LQ8IVG5 1584 aa16.25■□□□□ 0.19
DFFB-202ENST00000339350 PARD3Q8TEW0 1356 aa16.24■□□□□ 0.19
DFFB-202ENST00000339350 ZHX1Q9UKY1 873 aaPredicted RBP16.24■□□□□ 0.19
DFFB-202ENST00000339350 CCDC144AA2RUR9 1427 aa16.23■□□□□ 0.19
DFFB-202ENST00000339350 CDC42BPBQ9Y5S2 1711 aa16.23■□□□□ 0.19
DFFB-202ENST00000339350 ARHGEF12Q9NZN5 1544 aa16.23■□□□□ 0.19
DFFB-202ENST00000339350 L1TD1Q5T7N2 865 aaKnown RBP16.23■□□□□ 0.19
DFFB-202ENST00000339350 E9PCH4 1651 aa16.22■□□□□ 0.19
DFFB-202ENST00000339350 SHROOM2Q13796 1616 aa16.22■□□□□ 0.19
DFFB-202ENST00000339350 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.22■□□□□ 0.19
DFFB-202ENST00000339350 ADAMTS8Q9UP79 889 aa16.21■□□□□ 0.19
DFFB-202ENST00000339350 CCDC141Q6ZP82 1450 aa16.21■□□□□ 0.19
DFFB-202ENST00000339350 PLEKHH2Q8IVE3 1493 aa16.21■□□□□ 0.19
DFFB-202ENST00000339350 PRAG1Q86YV5 1406 aa16.21■□□□□ 0.19
DFFB-202ENST00000339350 PLCD3Q8N3E9 789 aa16.2■□□□□ 0.18
DFFB-202ENST00000339350 ZFP91Q96JP5 570 aaPredicted RBP16.2■□□□□ 0.18
DFFB-202ENST00000339350 KDM5DQ9BY66 1539 aa16.2■□□□□ 0.18
DFFB-202ENST00000339350 FAM135AQ9P2D6 1515 aa16.2■□□□□ 0.18
DFFB-202ENST00000339350 TESK2Q96S53 571 aa16.2■□□□□ 0.18
DFFB-202ENST00000339350 PDE3BQ13370 1112 aa16.19■□□□□ 0.18
DFFB-202ENST00000339350 TULP1O00294 542 aaPredicted RBP16.19■□□□□ 0.18
DFFB-202ENST00000339350 MS4A1P11836 297 aa16.18■□□□□ 0.18
DFFB-202ENST00000339350 PANK2Q9BZ23 570 aa16.18■□□□□ 0.18
DFFB-202ENST00000339350 SENP3Q9H4L4 574 aaPredicted RBP16.18■□□□□ 0.18
DFFB-202ENST00000339350 SAMD1Q6SPF0 538 aaPredicted RBP16.17■□□□□ 0.18
DFFB-202ENST00000339350 TRPM1Q7Z4N2 1603 aa16.17■□□□□ 0.18
DFFB-202ENST00000339350 ABCC2Q92887 1545 aa16.17■□□□□ 0.18
DFFB-202ENST00000339350 TPM2P07951 284 aa16.16■□□□□ 0.18
DFFB-202ENST00000339350 XRCC6P12956 609 aaKnown RBP eCLIP16.16■□□□□ 0.18
DFFB-202ENST00000339350 EFCAB2Q5VUJ9 269 aa16.16■□□□□ 0.18
DFFB-202ENST00000339350 TRAPPC8Q9Y2L5 1435 aa16.16■□□□□ 0.18
DFFB-202ENST00000339350 A2MP01023 1474 aa16.16■□□□□ 0.18
DFFB-202ENST00000339350 CCDC146Q8IYE0 955 aa16.16■□□□□ 0.18
DFFB-202ENST00000339350 CLASP1Q7Z460 1538 aa16.15■□□□□ 0.18
DFFB-202ENST00000339350 SHANK2Q9UPX8 1470 aa16.15■□□□□ 0.18
DFFB-202ENST00000339350 TMF1P82094 1093 aa16.15■□□□□ 0.18
DFFB-202ENST00000339350 PLA2R1Q13018 1463 aa16.14■□□□□ 0.17
DFFB-202ENST00000339350 PREX2Q70Z35 1606 aa16.14■□□□□ 0.17
DFFB-202ENST00000339350 ERBINQ96RT1 1412 aa16.13■□□□□ 0.17
DFFB-202ENST00000339350 COL17A1Q9UMD9 1497 aaPredicted RBP16.13■□□□□ 0.17
DFFB-202ENST00000339350 ZCCHC11Q5TAX3 1644 aaKnown RBP16.13■□□□□ 0.17
DFFB-202ENST00000339350 WDR43Q15061 677 aaKnown RBP eCLIP16.12■□□□□ 0.17
DFFB-202ENST00000339350 ARID3AQ99856 593 aa16.12■□□□□ 0.17
DFFB-202ENST00000339350 PRDM10Q9NQV6 1147 aa16.12■□□□□ 0.17
DFFB-202ENST00000339350 PLEKHH1Q9ULM0 1364 aa16.12■□□□□ 0.17
DFFB-202ENST00000339350 SPAG9O60271 1321 aaKnown RBP16.11■□□□□ 0.17
DFFB-202ENST00000339350 KNSTRNQ9Y448 316 aa16.11■□□□□ 0.17
DFFB-202ENST00000339350 ERBB4Q15303 1308 aa16.1■□□□□ 0.17
DFFB-202ENST00000339350 PPP2R1AP30153 589 aa16.09■□□□□ 0.17
DFFB-202ENST00000339350 BLMP54132 1417 aaPredicted RBP16.09■□□□□ 0.17
DFFB-202ENST00000339350 ESPNB1AK53 854 aa16.09■□□□□ 0.17
DFFB-202ENST00000339350 HOMEZQ8IX15 550 aa16.09■□□□□ 0.17
DFFB-202ENST00000339350 FTSJ3Q8IY81 847 aaKnown RBP16.09■□□□□ 0.17
DFFB-202ENST00000339350 KIF3BO15066 747 aa16.08■□□□□ 0.16
DFFB-202ENST00000339350 DUSP27Q5VZP5 1158 aa16.08■□□□□ 0.16
DFFB-202ENST00000339350 SECISBP2LQ93073 1101 aaKnown RBP16.08■□□□□ 0.16
DFFB-202ENST00000339350 GOLGA6L3A6NEY3 463 aa16.08■□□□□ 0.16
DFFB-202ENST00000339350 MYO5CQ9NQX4 1742 aa16.08■□□□□ 0.16
DFFB-202ENST00000339350 ARHGEF5Q12774 1597 aa16.07■□□□□ 0.16
DFFB-202ENST00000339350 KIAA1211Q6ZU35 1233 aa16.07■□□□□ 0.16
DFFB-202ENST00000339350 SMAP1Q8IYB5 467 aaPredicted RBP16.07■□□□□ 0.16
DFFB-202ENST00000339350 PLCH2O75038 1416 aa16.07■□□□□ 0.16
DFFB-202ENST00000339350 VGLL3A8MV65 326 aa16.07■□□□□ 0.16
DFFB-202ENST00000339350 SPINK5Q9NQ38 1064 aaPredicted RBP16.07■□□□□ 0.16
DFFB-202ENST00000339350 MAGI2Q86UL8 1455 aa16.06■□□□□ 0.16
DFFB-202ENST00000339350 ZMYM4Q5VZL5 1548 aa16.05■□□□□ 0.16
DFFB-202ENST00000339350 FAM13BQ9NYF5 915 aa16.05■□□□□ 0.16
DFFB-202ENST00000339350 GPRASP1Q5JY77 1395 aa16.05■□□□□ 0.16
DFFB-202ENST00000339350 BCAR3O75815 825 aa16.05■□□□□ 0.16
DFFB-202ENST00000339350 ZNF830Q96NB3 372 aaPredicted RBP16.05■□□□□ 0.16
DFFB-202ENST00000339350 PRDM15P57071 1507 aaPredicted RBP16.04■□□□□ 0.16
DFFB-202ENST00000339350 SCAPERQ9BY12 1400 aa16.04■□□□□ 0.16
DFFB-202ENST00000339350 GOLGA2Q08379 1002 aa16.04■□□□□ 0.16
DFFB-202ENST00000339350 KDM2BQ8NHM5 1336 aa16.04■□□□□ 0.16
DFFB-202ENST00000339350 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
DFFB-202ENST00000339350 APAF1O14727 1248 aa16.03■□□□□ 0.16
DFFB-202ENST00000339350 GZF1Q9H116 711 aaPredicted RBP16.03■□□□□ 0.16
DFFB-202ENST00000339350 CHGAP10645 457 aaKnown RBP16.02■□□□□ 0.15
DFFB-202ENST00000339350 C8orf34Q49A92 452 aa16.02■□□□□ 0.15
DFFB-202ENST00000339350 DMRT2Q9Y5R5 561 aa16.02■□□□□ 0.15
DFFB-202ENST00000339350 RIPK4P57078 832 aa16.01■□□□□ 0.15
DFFB-202ENST00000339350 AMER1Q5JTC6 1135 aaPredicted RBP16.01■□□□□ 0.15
DFFB-202ENST00000339350 CENPQQ7L2Z9 268 aaPredicted RBP16.01■□□□□ 0.15
DFFB-202ENST00000339350 TMEM51Q9NW97 253 aa16.01■□□□□ 0.15
DFFB-202ENST00000339350 NEUROD2Q15784 382 aa16■□□□□ 0.15
DFFB-202ENST00000339350 FSD2A1L4K1 749 aa15.99■□□□□ 0.15
DFFB-202ENST00000339350 NCLP19338 710 aaKnown RBP15.99■□□□□ 0.15
DFFB-202ENST00000339350 FAM161AQ3B820 660 aa15.99■□□□□ 0.15
DFFB-202ENST00000339350 TEX2Q8IWB9 1127 aa15.99■□□□□ 0.15
DFFB-202ENST00000339350 WDR7Q9Y4E6 1490 aa15.99■□□□□ 0.15
DFFB-202ENST00000339350 TNNT2P45379 298 aaPredicted RBP15.98■□□□□ 0.15
DFFB-202ENST00000339350 GGT6Q6P531 493 aa15.98■□□□□ 0.15
DFFB-202ENST00000339350 PPP4R3BQ5MIZ7 849 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms