RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 SPHKAPQ2M3C7 1700 aa15.39■□□□□ 0.05
LRP1-202ENST00000338962 PIK3C2BO00750 1634 aa15.39■□□□□ 0.05
LRP1-202ENST00000338962 A2ML1A8K2U0 1454 aa15.39■□□□□ 0.05
LRP1-202ENST00000338962 C11orf95C9JLR9 678 aaPredicted RBP15.39■□□□□ 0.05
LRP1-202ENST00000338962 UGGT1Q9NYU2 1555 aa15.38■□□□□ 0.05
LRP1-202ENST00000338962 POLR1AO95602 1720 aaPredicted RBP15.38■□□□□ 0.05
LRP1-202ENST00000338962 CARD11Q9BXL7 1154 aa15.38■□□□□ 0.05
LRP1-202ENST00000338962 CFAP65Q6ZU64 1925 aaKnown RBP15.37■□□□□ 0.05
LRP1-202ENST00000338962 KIF7Q2M1P5 1343 aa15.37■□□□□ 0.05
LRP1-202ENST00000338962 THEMISQ8N1K5 641 aaPredicted RBP15.37■□□□□ 0.05
LRP1-202ENST00000338962 RGL3Q3MIN7 710 aa15.36■□□□□ 0.05
LRP1-202ENST00000338962 CLTCL1P53675 1640 aa15.35■□□□□ 0.05
LRP1-202ENST00000338962 MYO3AQ8NEV4 1616 aa15.35■□□□□ 0.05
LRP1-202ENST00000338962 STAG3Q9UJ98 1225 aa15.35■□□□□ 0.05
LRP1-202ENST00000338962 PRAG1Q86YV5 1406 aa15.35■□□□□ 0.05
LRP1-202ENST00000338962 CEP170BQ9Y4F5 1589 aaPredicted RBP15.35■□□□□ 0.05
LRP1-202ENST00000338962 ROCK2O75116 1388 aaKnown RBP15.35■□□□□ 0.05
LRP1-202ENST00000338962 LMTK3Q96Q04 1460 aa15.34■□□□□ 0.05
LRP1-202ENST00000338962 NEURL4Q96JN8 1562 aa15.34■□□□□ 0.05
LRP1-202ENST00000338962 CHGAP10645 457 aaKnown RBP15.33■□□□□ 0.04
LRP1-202ENST00000338962 ADGRB3O60242 1522 aa15.33■□□□□ 0.04
LRP1-202ENST00000338962 KDM5AP29375 1690 aaKnown RBP15.32■□□□□ 0.04
LRP1-202ENST00000338962 TMEM131LA2VDJ0 1609 aa15.32■□□□□ 0.04
LRP1-202ENST00000338962 RPGRIP1LQ68CZ1 1315 aa15.32■□□□□ 0.04
LRP1-202ENST00000338962 TMEM2Q9UHN6 1383 aa15.32■□□□□ 0.04
LRP1-202ENST00000338962 ZNF142P52746 1687 aaPredicted RBP15.31■□□□□ 0.04
LRP1-202ENST00000338962 ARHGAP23Q9P227 1491 aa15.3■□□□□ 0.04
LRP1-202ENST00000338962 TRPM1Q7Z4N2 1603 aa15.3■□□□□ 0.04
LRP1-202ENST00000338962 HDGFP51858 240 aaKnown RBP15.29■□□□□ 0.04
LRP1-202ENST00000338962 SLIT1O75093 1534 aa15.29■□□□□ 0.04
LRP1-202ENST00000338962 UBR1Q8IWV7 1749 aa15.29■□□□□ 0.04
LRP1-202ENST00000338962 STAC3Q96MF2 364 aa15.29■□□□□ 0.04
LRP1-202ENST00000338962 ZFYVE9O95405 1425 aa15.28■□□□□ 0.04
LRP1-202ENST00000338962 POLR3GLQ9BT43 218 aa15.28■□□□□ 0.04
LRP1-202ENST00000338962 ST20-MTHFSA0A0A6YYL1 179 aa15.28■□□□□ 0.04
LRP1-202ENST00000338962 HSPA2P54652 639 aa15.28■□□□□ 0.04
LRP1-202ENST00000338962 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.28■□□□□ 0.04
LRP1-202ENST00000338962 LTKP29376 864 aa15.27■□□□□ 0.04
LRP1-202ENST00000338962 ANKLE2Q86XL3 938 aa15.27■□□□□ 0.04
LRP1-202ENST00000338962 PRKRIP1Q9H875 184 aaPredicted RBP15.26■□□□□ 0.03
LRP1-202ENST00000338962 RIMS2Q9UQ26 1411 aa15.26■□□□□ 0.03
LRP1-202ENST00000338962 TXNDC2Q86VQ3 553 aa15.26■□□□□ 0.03
LRP1-202ENST00000338962 EID1Q9Y6B2 187 aa15.26■□□□□ 0.03
LRP1-202ENST00000338962 GPRASP1Q5JY77 1395 aa15.26■□□□□ 0.03
LRP1-202ENST00000338962 VGFO15240 615 aaPredicted RBP15.25■□□□□ 0.03
LRP1-202ENST00000338962 KIF1BO60333 1816 aa15.24■□□□□ 0.03
LRP1-202ENST00000338962 NBPF1Q3BBV0 1214 aa15.24■□□□□ 0.03
LRP1-202ENST00000338962 LAMC1P11047 1609 aa15.23■□□□□ 0.03
LRP1-202ENST00000338962 NEXMIFQ5QGS0 1516 aa15.23■□□□□ 0.03
LRP1-202ENST00000338962 SCAF11Q99590 1463 aaKnown RBP15.22■□□□□ 0.03
LRP1-202ENST00000338962 MED14O60244 1454 aa15.21■□□□□ 0.03
LRP1-202ENST00000338962 NCKAP5LQ9HCH0 1330 aa15.21■□□□□ 0.03
LRP1-202ENST00000338962 NUTM2DQ5VT03 806 aaPredicted RBP15.21■□□□□ 0.02
LRP1-202ENST00000338962 PLEKHG1Q9ULL1 1385 aa15.2■□□□□ 0.02
LRP1-202ENST00000338962 ADGRF5Q8IZF2 1346 aa15.2■□□□□ 0.02
LRP1-202ENST00000338962 MYOM2P54296 1465 aa15.2■□□□□ 0.02
LRP1-202ENST00000338962 NRXN1Q9ULB1 1477 aa15.19■□□□□ 0.02
LRP1-202ENST00000338962 MYO5BQ9ULV0 1848 aa15.19■□□□□ 0.02
LRP1-202ENST00000338962 MRS2Q9HD23 443 aa15.17■□□□□ 0.02
LRP1-202ENST00000338962 DMRT2Q9Y5R5 561 aa15.17■□□□□ 0.02
LRP1-202ENST00000338962 NPHP4O75161 1426 aaPredicted RBP15.16■□□□□ 0.02
LRP1-202ENST00000338962 PIK3C2GO75747 1445 aa15.16■□□□□ 0.02
LRP1-202ENST00000338962 TBX22Q9Y458 520 aa15.15■□□□□ 0.02
LRP1-202ENST00000338962 PPLO60437 1756 aa15.15■□□□□ 0.02
LRP1-202ENST00000338962 HNRNPUQ00839 825 aaKnown RBP eCLIP15.15■□□□□ 0.02
LRP1-202ENST00000338962 CCDC184Q52MB2 194 aa15.15■□□□□ 0.02
LRP1-202ENST00000338962 C14orf93Q9H972 538 aaKnown RBP15.15■□□□□ 0.02
LRP1-202ENST00000338962 ADAMTS13Q76LX8 1427 aa15.14■□□□□ 0.01
LRP1-202ENST00000338962 IFT172Q9UG01 1749 aa15.14■□□□□ 0.01
LRP1-202ENST00000338962 SETBP1Q9Y6X0 1596 aa15.13■□□□□ 0.01
LRP1-202ENST00000338962 TESK2Q96S53 571 aa15.13■□□□□ 0.01
LRP1-202ENST00000338962 STRCQ7RTU9 1775 aa15.13■□□□□ 0.01
LRP1-202ENST00000338962 CNGB1Q14028 1251 aaPredicted RBP15.12■□□□□ 0.01
LRP1-202ENST00000338962 TMF1P82094 1093 aa15.12■□□□□ 0.01
LRP1-202ENST00000338962 SLC26A8Q96RN1 970 aa15.12■□□□□ 0.01
LRP1-202ENST00000338962 BCANQ96GW7 911 aa15.11■□□□□ 0.01
LRP1-202ENST00000338962 CFAP70Q5T0N1 1121 aa15.11■□□□□ 0.01
LRP1-202ENST00000338962 FAM9BQ8IZU0 186 aa15.11■□□□□ 0.01
LRP1-202ENST00000338962 DISP3Q9P2K9 1392 aa15.11■□□□□ 0.01
LRP1-202ENST00000338962 IQGAP1P46940 1657 aa15.1■□□□□ 0.01
LRP1-202ENST00000338962 PIK3R4Q99570 1358 aa15.09■□□□□ 0.01
LRP1-202ENST00000338962 FBXO41Q8TF61 875 aa15.09■□□□□ 0.01
LRP1-202ENST00000338962 KIAA1210Q9ULL0 1709 aa15.09■□□□□ 0.01
LRP1-202ENST00000338962 NRXN3Q9Y4C0 1643 aa15.09■□□□□ 0.01
LRP1-202ENST00000338962 KTN1Q86UP2 1357 aaKnown RBP15.08■□□□□ 0.01
LRP1-202ENST00000338962 ALKQ9UM73 1620 aa15.08■□□□□ 0
LRP1-202ENST00000338962 METP08581 1390 aa15.08■□□□□ 0
LRP1-202ENST00000338962 EIF3AQ14152 1382 aaKnown RBP15.08■□□□□ 0
LRP1-202ENST00000338962 SENP3Q9H4L4 574 aaPredicted RBP15.08■□□□□ 0
LRP1-202ENST00000338962 DIP2AQ14689 1571 aa15.07■□□□□ 0
LRP1-202ENST00000338962 SUPT16HQ9Y5B9 1047 aaKnown RBP15.07■□□□□ 0
LRP1-202ENST00000338962 RALBP1Q15311 655 aa15.05■□□□□ 0
LRP1-202ENST00000338962 KCNA6P17658 529 aa15.04■□□□□ -0
LRP1-202ENST00000338962 TMEM132EQ6IEE7 984 aa15.04■□□□□ -0
LRP1-202ENST00000338962 CDCA8Q53HL2 280 aa15.04■□□□□ -0
LRP1-202ENST00000338962 ADGRB1O14514 1584 aa15.03■□□□□ -0
LRP1-202ENST00000338962 TMC1Q8TDI8 760 aa15.03■□□□□ -0
LRP1-202ENST00000338962 MYBBP1AQ9BQG0 1328 aaKnown RBP15.03■□□□□ -0
LRP1-202ENST00000338962 PTPRUQ92729 1446 aa15.03■□□□□ -0
LRP1-202ENST00000338962 ABCC11Q96J66 1382 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms