RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 ZMYM4Q5VZL5 1548 aa22.25■■□□□ 1.15
SCNN1A-202ENST00000338748 CHGAP10645 457 aaKnown RBP22.24■■□□□ 1.15
SCNN1A-202ENST00000338748 NOS1P29475 1434 aa22.24■■□□□ 1.15
SCNN1A-202ENST00000338748 NRXN1Q9ULB1 1477 aa22.24■■□□□ 1.15
SCNN1A-202ENST00000338748 SYNMO15061 1565 aa22.23■■□□□ 1.15
SCNN1A-202ENST00000338748 TMF1P82094 1093 aa22.23■■□□□ 1.15
SCNN1A-202ENST00000338748 PER1O15534 1290 aaPredicted RBP22.23■■□□□ 1.15
SCNN1A-202ENST00000338748 PPLO60437 1756 aa22.19■■□□□ 1.14
SCNN1A-202ENST00000338748 ZC3H13Q5T200 1668 aaKnown RBP22.19■■□□□ 1.14
SCNN1A-202ENST00000338748 PIK3C2BO00750 1634 aa22.19■■□□□ 1.14
SCNN1A-202ENST00000338748 PANK3Q9H999 370 aa22.18■■□□□ 1.14
SCNN1A-202ENST00000338748 ARHGAP31Q2M1Z3 1444 aa22.16■■□□□ 1.14
SCNN1A-202ENST00000338748 PARD3Q8TEW0 1356 aa22.16■■□□□ 1.14
SCNN1A-202ENST00000338748 MYBBP1AQ9BQG0 1328 aaKnown RBP22.16■■□□□ 1.14
SCNN1A-202ENST00000338748 PIK3C2GO75747 1445 aa22.15■■□□□ 1.14
SCNN1A-202ENST00000338748 KIF13AQ9H1H9 1805 aa22.15■■□□□ 1.14
SCNN1A-202ENST00000338748 FKBP8Q14318 412 aa22.14■■□□□ 1.14
SCNN1A-202ENST00000338748 RALBP1Q15311 655 aa22.14■■□□□ 1.14
SCNN1A-202ENST00000338748 KTN1Q86UP2 1357 aaKnown RBP22.14■■□□□ 1.13
SCNN1A-202ENST00000338748 PNISRQ8TF01 805 aaKnown RBP22.14■■□□□ 1.13
SCNN1A-202ENST00000338748 ZBED9Q6R2W3 1325 aa22.13■■□□□ 1.13
SCNN1A-202ENST00000338748 EIF3AQ14152 1382 aaKnown RBP22.13■■□□□ 1.13
SCNN1A-202ENST00000338748 TMC1Q8TDI8 760 aa22.12■■□□□ 1.13
SCNN1A-202ENST00000338748 CC2D1BQ5T0F9 858 aaKnown RBP22.11■■□□□ 1.13
SCNN1A-202ENST00000338748 MYOM1P52179 1685 aa22.11■■□□□ 1.13
SCNN1A-202ENST00000338748 BRD4O60885 1362 aaPredicted RBP22.11■■□□□ 1.13
SCNN1A-202ENST00000338748 NUTM2DQ5VT03 806 aaPredicted RBP22.1■■□□□ 1.13
SCNN1A-202ENST00000338748 PREX1Q8TCU6 1659 aa22.1■■□□□ 1.13
SCNN1A-202ENST00000338748 IDI1Q13907 227 aa22.1■■□□□ 1.13
SCNN1A-202ENST00000338748 NEXMIFQ5QGS0 1516 aa22.1■■□□□ 1.13
SCNN1A-202ENST00000338748 SENP3-EIF4A1A0A087X0R7 540 aa22.09■■□□□ 1.13
SCNN1A-202ENST00000338748 ADGRB1O14514 1584 aa22.09■■□□□ 1.13
SCNN1A-202ENST00000338748 SETBP1Q9Y6X0 1596 aa22.09■■□□□ 1.13
SCNN1A-202ENST00000338748 BCANQ96GW7 911 aa22.08■■□□□ 1.13
SCNN1A-202ENST00000338748 ERVK-7P63135 1459 aa22.08■■□□□ 1.13
SCNN1A-202ENST00000338748 PELP1Q8IZL8 1130 aaKnown RBP22.07■■□□□ 1.12
SCNN1A-202ENST00000338748 REREQ9P2R6 1566 aa22.07■■□□□ 1.12
SCNN1A-202ENST00000338748 MYO3AQ8NEV4 1616 aa22.07■■□□□ 1.12
SCNN1A-202ENST00000338748 MYO5BQ9ULV0 1848 aa22.07■■□□□ 1.12
SCNN1A-202ENST00000338748 C14orf93Q9H972 538 aaKnown RBP22.06■■□□□ 1.12
SCNN1A-202ENST00000338748 LRPPRCP42704 1394 aaKnown RBP22.06■■□□□ 1.12
SCNN1A-202ENST00000338748 RPGRIP1LQ68CZ1 1315 aa22.06■■□□□ 1.12
SCNN1A-202ENST00000338748 FBXO31Q5XUX0 539 aaPredicted RBP22.06■■□□□ 1.12
SCNN1A-202ENST00000338748 TMEM132EQ6IEE7 984 aa22.06■■□□□ 1.12
SCNN1A-202ENST00000338748 NLRP13Q86W25 1043 aa22.05■■□□□ 1.12
SCNN1A-202ENST00000338748 KDM5AP29375 1690 aaKnown RBP22.05■■□□□ 1.12
SCNN1A-202ENST00000338748 TRAK1Q9UPV9 953 aa22.03■■□□□ 1.12
SCNN1A-202ENST00000338748 AGLP35573 1532 aa22.03■■□□□ 1.12
SCNN1A-202ENST00000338748 CDCA8Q53HL2 280 aa22.02■■□□□ 1.12
SCNN1A-202ENST00000338748 TMEM131LA2VDJ0 1609 aa22.02■■□□□ 1.12
SCNN1A-202ENST00000338748 NEFLP07196 543 aa22.02■■□□□ 1.11
SCNN1A-202ENST00000338748 SLC52A1Q9NWF4 448 aa22.01■■□□□ 1.11
SCNN1A-202ENST00000338748 SENP3Q9H4L4 574 aaPredicted RBP22■■□□□ 1.11
SCNN1A-202ENST00000338748 ARHGEF40Q8TER5 1519 aa22■■□□□ 1.11
SCNN1A-202ENST00000338748 CLTCQ00610 1675 aaKnown RBP22■■□□□ 1.11
SCNN1A-202ENST00000338748 AMER1Q5JTC6 1135 aaPredicted RBP21.99■■□□□ 1.11
SCNN1A-202ENST00000338748 CENPJQ9HC77 1338 aaPredicted RBP21.99■■□□□ 1.11
SCNN1A-202ENST00000338748 SBNO2Q9Y2G9 1366 aa21.99■■□□□ 1.11
SCNN1A-202ENST00000338748 QRICH2Q9H0J4 1663 aa21.98■■□□□ 1.11
SCNN1A-202ENST00000338748 VGFO15240 615 aaPredicted RBP21.97■■□□□ 1.11
SCNN1A-202ENST00000338748 MLECQ14165 292 aa21.97■■□□□ 1.11
SCNN1A-202ENST00000338748 KNSTRNQ9Y448 316 aa21.97■■□□□ 1.11
SCNN1A-202ENST00000338748 IRX6P78412 446 aaPredicted RBP21.96■■□□□ 1.11
SCNN1A-202ENST00000338748 ASXL1Q8IXJ9 1541 aa21.95■■□□□ 1.1
SCNN1A-202ENST00000338748 ARHGEF28Q8N1W1 1705 aaKnown RBP21.93■■□□□ 1.1
SCNN1A-202ENST00000338748 ZFYVE9O95405 1425 aa21.93■■□□□ 1.1
SCNN1A-202ENST00000338748 CARD14Q9BXL6 1004 aa21.91■■□□□ 1.1
SCNN1A-202ENST00000338748 SMG6Q86US8 1419 aaKnown RBP21.9■■□□□ 1.1
SCNN1A-202ENST00000338748 SPATA31D1Q6ZQQ2 1576 aa21.89■■□□□ 1.09
SCNN1A-202ENST00000338748 SLC24A1O60721 1099 aa21.89■■□□□ 1.09
SCNN1A-202ENST00000338748 PPP2R1AP30153 589 aa21.89■■□□□ 1.09
SCNN1A-202ENST00000338748 PPP6R1Q9UPN7 881 aa21.88■■□□□ 1.09
SCNN1A-202ENST00000338748 TULP4Q9NRJ4 1543 aa21.86■■□□□ 1.09
SCNN1A-202ENST00000338748 NPC1L1Q9UHC9 1359 aa21.86■■□□□ 1.09
SCNN1A-202ENST00000338748 NUDCQ9Y266 331 aa21.86■■□□□ 1.09
SCNN1A-202ENST00000338748 SALL2Q9Y467 1007 aaPredicted RBP21.84■■□□□ 1.09
SCNN1A-202ENST00000338748 A2ML1A8K2U0 1454 aa21.84■■□□□ 1.09
SCNN1A-202ENST00000338748 SAFB2Q14151 953 aaKnown RBP eCLIP21.84■■□□□ 1.09
SCNN1A-202ENST00000338748 STK26Q9P289 416 aa21.84■■□□□ 1.09
SCNN1A-202ENST00000338748 BLMP54132 1417 aaPredicted RBP21.84■■□□□ 1.09
SCNN1A-202ENST00000338748 SLC12A5Q9H2X9 1139 aa21.83■■□□□ 1.09
SCNN1A-202ENST00000338748 STAG3Q9UJ98 1225 aa21.82■■□□□ 1.08
SCNN1A-202ENST00000338748 ALKQ9UM73 1620 aa21.81■■□□□ 1.08
SCNN1A-202ENST00000338748 PTPRMP28827 1452 aa21.8■■□□□ 1.08
SCNN1A-202ENST00000338748 ZMYM3Q14202 1370 aa21.79■■□□□ 1.08
SCNN1A-202ENST00000338748 NSD3Q9BZ95 1437 aa21.79■■□□□ 1.08
SCNN1A-202ENST00000338748 ADAMTS8Q9UP79 889 aa21.79■■□□□ 1.08
SCNN1A-202ENST00000338748 YTHDC2Q9H6S0 1430 aaKnown RBP21.78■■□□□ 1.08
SCNN1A-202ENST00000338748 INSRP06213 1382 aa21.76■■□□□ 1.07
SCNN1A-202ENST00000338748 CABP2Q9NPB3 220 aa21.76■■□□□ 1.07
SCNN1A-202ENST00000338748 RIMS2Q9UQ26 1411 aa21.76■■□□□ 1.07
SCNN1A-202ENST00000338748 EVC2Q86UK5 1308 aa21.76■■□□□ 1.07
SCNN1A-202ENST00000338748 PRAM1Q96QH2 718 aa21.74■■□□□ 1.07
SCNN1A-202ENST00000338748 SETD1AO15047 1707 aaKnown RBP21.73■■□□□ 1.07
SCNN1A-202ENST00000338748 ESF1Q9H501 851 aaKnown RBP21.73■■□□□ 1.07
SCNN1A-202ENST00000338748 CDCA7LQ96GN5 454 aa21.72■■□□□ 1.07
SCNN1A-202ENST00000338748 RNF123Q5XPI4 1314 aa21.71■■□□□ 1.07
SCNN1A-202ENST00000338748 MINK1Q8N4C8 1332 aaPredicted RBP21.71■■□□□ 1.07
SCNN1A-202ENST00000338748 WDR43Q15061 677 aaKnown RBP eCLIP21.7■■□□□ 1.06
SCNN1A-202ENST00000338748 NRXN3Q9Y4C0 1643 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms