RNA–Protein interactions for RNA: ENST00000337303.8

PBRM1-202, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-202ENST00000337303 TRAK2O60296 914 aa8.29□□□□□ -1.08
PBRM1-202ENST00000337303 AMPHP49418 695 aa8.29□□□□□ -1.08
PBRM1-202ENST00000337303 BICD2Q8TD16 824 aa8.29□□□□□ -1.08
PBRM1-202ENST00000337303 R3HCC1Q9Y3T6 440 aaKnown RBP8.29□□□□□ -1.08
PBRM1-202ENST00000337303 ROCK1Q13464 1354 aa8.28□□□□□ -1.08
PBRM1-202ENST00000337303 LRRFIP1Q32MZ4 808 aaKnown RBP8.28□□□□□ -1.08
PBRM1-202ENST00000337303 MCTP1Q6DN14 999 aa8.28□□□□□ -1.08
PBRM1-202ENST00000337303 CNTLNQ9NXG0 1405 aa8.28□□□□□ -1.08
PBRM1-202ENST00000337303 ANO2Q9NQ90 1003 aa8.28□□□□□ -1.08
PBRM1-202ENST00000337303 ERCC6Q03468 1493 aa8.28□□□□□ -1.08
PBRM1-202ENST00000337303 UACAQ9BZF9 1416 aa8.28□□□□□ -1.08
PBRM1-202ENST00000337303 TDRD9Q8NDG6 1382 aaKnown RBP8.28□□□□□ -1.08
PBRM1-202ENST00000337303 SMC3Q9UQE7 1217 aa8.28□□□□□ -1.08
PBRM1-202ENST00000337303 KIF7Q2M1P5 1343 aa8.28□□□□□ -1.08
PBRM1-202ENST00000337303 RNF20Q5VTR2 975 aa8.28□□□□□ -1.08
PBRM1-202ENST00000337303 SASS6Q6UVJ0 657 aa8.28□□□□□ -1.08
PBRM1-202ENST00000337303 BRPF3Q9ULD4 1205 aa8.28□□□□□ -1.08
PBRM1-202ENST00000337303 MBD3O95983 291 aa8.27□□□□□ -1.08
PBRM1-202ENST00000337303 HMGN5P82970 282 aaKnown RBP8.27□□□□□ -1.08
PBRM1-202ENST00000337303 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.27□□□□□ -1.08
PBRM1-202ENST00000337303 ANKRD20A12PQ8NF67 263 aa8.27□□□□□ -1.08
PBRM1-202ENST00000337303 IFT57Q9NWB7 429 aa8.27□□□□□ -1.08
PBRM1-202ENST00000337303 LNPKQ9C0E8 428 aa8.27□□□□□ -1.09
PBRM1-202ENST00000337303 EVC2Q86UK5 1308 aa8.27□□□□□ -1.09
PBRM1-202ENST00000337303 AKAP17AQ02040 695 aaKnown RBP8.27□□□□□ -1.09
PBRM1-202ENST00000337303 AEBP2Q6ZN18 517 aaPredicted RBP8.27□□□□□ -1.09
PBRM1-202ENST00000337303 NGDNQ8NEJ9 315 aaKnown RBP8.27□□□□□ -1.09
PBRM1-202ENST00000337303 BRD4O60885 1362 aaPredicted RBP8.27□□□□□ -1.09
PBRM1-202ENST00000337303 TOP2AP11388 1531 aaKnown RBP8.27□□□□□ -1.09
PBRM1-202ENST00000337303 VPS37CA5D8V6 355 aaPredicted RBP8.27□□□□□ -1.09
PBRM1-202ENST00000337303 MNS1Q8NEH6 495 aa8.27□□□□□ -1.09
PBRM1-202ENST00000337303 RUNDC1Q96C34 613 aa8.27□□□□□ -1.09
PBRM1-202ENST00000337303 ACBD3Q9H3P7 528 aa8.27□□□□□ -1.09
PBRM1-202ENST00000337303 FRAT2O75474 233 aaPredicted RBP8.26□□□□□ -1.09
PBRM1-202ENST00000337303 HOOK1Q9UJC3 728 aaKnown RBP8.26□□□□□ -1.09
PBRM1-202ENST00000337303 SYNE3Q6ZMZ3 975 aa8.26□□□□□ -1.09
PBRM1-202ENST00000337303 NOM1Q5C9Z4 860 aaKnown RBP8.26□□□□□ -1.09
PBRM1-202ENST00000337303 CCDC73Q6ZRK6 1079 aa8.26□□□□□ -1.09
PBRM1-202ENST00000337303 CDC45O75419 566 aa8.26□□□□□ -1.09
PBRM1-202ENST00000337303 CPLX1O14810 134 aa8.25□□□□□ -1.09
PBRM1-202ENST00000337303 MARCH6O60337 910 aa8.25□□□□□ -1.09
PBRM1-202ENST00000337303 TRIM29Q14134 588 aa8.25□□□□□ -1.09
PBRM1-202ENST00000337303 HSP90B2PQ58FF3 399 aa8.25□□□□□ -1.09
PBRM1-202ENST00000337303 DIAPH1O60610 1272 aaKnown RBP8.25□□□□□ -1.09
PBRM1-202ENST00000337303 CCDC173Q0VFZ6 552 aa8.25□□□□□ -1.09
PBRM1-202ENST00000337303 IL27Q8NEV9 243 aa8.25□□□□□ -1.09
PBRM1-202ENST00000337303 CCDC66A2RUB6 948 aa8.25□□□□□ -1.09
PBRM1-202ENST00000337303 RIPK4P57078 832 aa8.25□□□□□ -1.09
PBRM1-202ENST00000337303 COG3Q96JB2 828 aa8.25□□□□□ -1.09
PBRM1-202ENST00000337303 WASHC2CQ9Y4E1 1318 aa8.25□□□□□ -1.09
PBRM1-202ENST00000337303 NCBP3Q53F19 620 aaKnown RBP8.24□□□□□ -1.09
PBRM1-202ENST00000337303 IFIT2P09913 472 aaKnown RBP8.24□□□□□ -1.09
PBRM1-202ENST00000337303 SMARCA2P51531 1590 aa8.24□□□□□ -1.09
PBRM1-202ENST00000337303 VGFO15240 615 aaPredicted RBP8.24□□□□□ -1.09
PBRM1-202ENST00000337303 HSP90AB4PQ58FF6 505 aa8.24□□□□□ -1.09
PBRM1-202ENST00000337303 PANK1Q8TE04 598 aa8.24□□□□□ -1.09
PBRM1-202ENST00000337303 STAC3Q96MF2 364 aa8.24□□□□□ -1.09
PBRM1-202ENST00000337303 BACH2Q9BYV9 841 aa8.24□□□□□ -1.09
PBRM1-202ENST00000337303 WIZO95785 1651 aa8.24□□□□□ -1.09
PBRM1-202ENST00000337303 LETM1O95202 739 aaPredicted RBP8.24□□□□□ -1.09
PBRM1-202ENST00000337303 PDE4CQ08493 712 aa8.24□□□□□ -1.09
PBRM1-202ENST00000337303 NEXNQ0ZGT2 675 aa8.24□□□□□ -1.09
PBRM1-202ENST00000337303 RNF214Q8ND24 703 aa8.24□□□□□ -1.09
PBRM1-202ENST00000337303 CCDC47Q96A33 483 aaKnown RBP8.24□□□□□ -1.09
PBRM1-202ENST00000337303 GNAI1P63096 354 aa8.23□□□□□ -1.09
PBRM1-202ENST00000337303 ANO8Q9HCE9 1232 aaPredicted RBP8.23□□□□□ -1.09
PBRM1-202ENST00000337303 TEFQ10587 303 aa8.23□□□□□ -1.09
PBRM1-202ENST00000337303 PKNOX2Q96KN3 472 aa8.23□□□□□ -1.09
PBRM1-202ENST00000337303 C9orf78Q9NZ63 289 aaPredicted RBP8.23□□□□□ -1.09
PBRM1-202ENST00000337303 MCM2P49736 904 aa8.23□□□□□ -1.09
PBRM1-202ENST00000337303 CAVIN1Q6NZI2 390 aaKnown RBP8.23□□□□□ -1.09
PBRM1-202ENST00000337303 LTV1Q96GA3 475 aaPredicted RBP8.23□□□□□ -1.09
PBRM1-202ENST00000337303 WASHC2AQ641Q2 1341 aa8.23□□□□□ -1.09
PBRM1-202ENST00000337303 CDR1P51861 262 aa8.23□□□□□ -1.09
PBRM1-202ENST00000337303 NAT10Q9H0A0 1025 aaKnown RBP8.23□□□□□ -1.09
PBRM1-202ENST00000337303 PDE3AQ14432 1141 aa8.22□□□□□ -1.09
PBRM1-202ENST00000337303 CWC15Q9P013 229 aaKnown RBP8.22□□□□□ -1.09
PBRM1-202ENST00000337303 PDS5BQ9NTI5 1447 aa8.22□□□□□ -1.09
PBRM1-202ENST00000337303 ERC2O15083 957 aa8.22□□□□□ -1.09
PBRM1-202ENST00000337303 MIA2Q96PC5 1412 aa8.22□□□□□ -1.09
PBRM1-202ENST00000337303 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.22□□□□□ -1.09
PBRM1-202ENST00000337303 AK7Q96M32 723 aa8.22□□□□□ -1.09
PBRM1-202ENST00000337303 RUFY1Q96T51 708 aa8.22□□□□□ -1.09
PBRM1-202ENST00000337303 TRDNQ13061 729 aa8.22□□□□□ -1.09
PBRM1-202ENST00000337303 RABEP1Q15276 862 aa8.22□□□□□ -1.09
PBRM1-202ENST00000337303 NUTM2DQ5VT03 806 aaPredicted RBP8.21□□□□□ -1.09
PBRM1-202ENST00000337303 PCMTD1Q96MG8 357 aaPredicted RBP8.21□□□□□ -1.09
PBRM1-202ENST00000337303 FKBP5Q13451 457 aaPredicted RBP8.21□□□□□ -1.1
PBRM1-202ENST00000337303 EID1Q9Y6B2 187 aa8.21□□□□□ -1.1
PBRM1-202ENST00000337303 G3BP1Q13283 466 aaKnown RBP eCLIP8.2□□□□□ -1.1
PBRM1-202ENST00000337303 SDF4Q9BRK5 362 aa8.2□□□□□ -1.1
PBRM1-202ENST00000337303 TRIM5Q9C035 493 aa8.2□□□□□ -1.1
PBRM1-202ENST00000337303 TMX4Q9H1E5 349 aaPredicted RBP8.2□□□□□ -1.1
PBRM1-202ENST00000337303 TSPY26PQ9H489 355 aa8.2□□□□□ -1.1
PBRM1-202ENST00000337303 ADAMTS8Q9UP79 889 aa8.2□□□□□ -1.1
PBRM1-202ENST00000337303 RRP9O43818 475 aaKnown RBP8.2□□□□□ -1.1
PBRM1-202ENST00000337303 PDCP20941 246 aa8.2□□□□□ -1.1
PBRM1-202ENST00000337303 C1orf141Q5JVX7 400 aa8.2□□□□□ -1.1
PBRM1-202ENST00000337303 ERCC4Q92889 916 aaPredicted RBP8.2□□□□□ -1.1
PBRM1-202ENST00000337303 CDCA7LQ96GN5 454 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms