RNA–Protein interactions for RNA: ENST00000336803.1

CLDN2-201, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN2, Length 2,959 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-201ENST00000336803 PPLO60437 1756 aa12.62□□□□□ -0.39
CLDN2-201ENST00000336803 SIGLEC1Q9BZZ2 1709 aa12.62□□□□□ -0.39
CLDN2-201ENST00000336803 SETBP1Q9Y6X0 1596 aa12.61□□□□□ -0.39
CLDN2-201ENST00000336803 DISP3Q9P2K9 1392 aa12.61□□□□□ -0.39
CLDN2-201ENST00000336803 MRS2Q9HD23 443 aa12.6□□□□□ -0.39
CLDN2-201ENST00000336803 WASHC2CQ9Y4E1 1318 aa12.6□□□□□ -0.39
CLDN2-201ENST00000336803 MYO3AQ8NEV4 1616 aa12.6□□□□□ -0.39
CLDN2-201ENST00000336803 RALBP1Q15311 655 aa12.59□□□□□ -0.39
CLDN2-201ENST00000336803 SUPT16HQ9Y5B9 1047 aaKnown RBP12.59□□□□□ -0.39
CLDN2-201ENST00000336803 TMF1P82094 1093 aa12.59□□□□□ -0.39
CLDN2-201ENST00000336803 YEATS2Q9ULM3 1422 aa12.59□□□□□ -0.39
CLDN2-201ENST00000336803 SYNMO15061 1565 aa12.58□□□□□ -0.4
CLDN2-201ENST00000336803 PER1O15534 1290 aaPredicted RBP12.58□□□□□ -0.4
CLDN2-201ENST00000336803 RPGRIP1LQ68CZ1 1315 aa12.58□□□□□ -0.4
CLDN2-201ENST00000336803 HNRNPUQ00839 825 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLDN2-201ENST00000336803 POLR3GLQ9BT43 218 aa12.57□□□□□ -0.4
CLDN2-201ENST00000336803 EIF3AQ14152 1382 aaKnown RBP12.57□□□□□ -0.4
CLDN2-201ENST00000336803 PARD3Q8TEW0 1356 aa12.57□□□□□ -0.4
CLDN2-201ENST00000336803 AGLP35573 1532 aa12.57□□□□□ -0.4
CLDN2-201ENST00000336803 BRD4O60885 1362 aaPredicted RBP12.57□□□□□ -0.4
CLDN2-201ENST00000336803 GGT6Q6P531 493 aa12.57□□□□□ -0.4
CLDN2-201ENST00000336803 FAM69CQ0P6D2 419 aa12.56□□□□□ -0.4
CLDN2-201ENST00000336803 PIK3C2GO75747 1445 aa12.55□□□□□ -0.4
CLDN2-201ENST00000336803 MYBBP1AQ9BQG0 1328 aaKnown RBP12.55□□□□□ -0.4
CLDN2-201ENST00000336803 KIF13AQ9H1H9 1805 aa12.55□□□□□ -0.4
CLDN2-201ENST00000336803 ZBED9Q6R2W3 1325 aa12.55□□□□□ -0.4
CLDN2-201ENST00000336803 ADGRF5Q8IZF2 1346 aa12.55□□□□□ -0.4
CLDN2-201ENST00000336803 MYOM1P52179 1685 aa12.54□□□□□ -0.4
CLDN2-201ENST00000336803 PREX1Q8TCU6 1659 aa12.54□□□□□ -0.4
CLDN2-201ENST00000336803 LRPPRCP42704 1394 aaKnown RBP12.53□□□□□ -0.4
CLDN2-201ENST00000336803 SBNO2Q9Y2G9 1366 aa12.53□□□□□ -0.4
CLDN2-201ENST00000336803 TSPOAP1O95153 1857 aa12.53□□□□□ -0.4
CLDN2-201ENST00000336803 CDCA8Q53HL2 280 aa12.53□□□□□ -0.4
CLDN2-201ENST00000336803 KDM5AP29375 1690 aaKnown RBP12.53□□□□□ -0.4
CLDN2-201ENST00000336803 ADGRB1O14514 1584 aa12.53□□□□□ -0.4
CLDN2-201ENST00000336803 PNISRQ8TF01 805 aaKnown RBP12.53□□□□□ -0.4
CLDN2-201ENST00000336803 NEXMIFQ5QGS0 1516 aa12.53□□□□□ -0.4
CLDN2-201ENST00000336803 CFAP65Q6ZU64 1925 aaKnown RBP12.52□□□□□ -0.4
CLDN2-201ENST00000336803 PPP6R1Q9UPN7 881 aa12.52□□□□□ -0.4
CLDN2-201ENST00000336803 ZFYVE9O95405 1425 aa12.52□□□□□ -0.41
CLDN2-201ENST00000336803 CNGB1Q14028 1251 aaPredicted RBP12.52□□□□□ -0.41
CLDN2-201ENST00000336803 FAM9BQ8IZU0 186 aa12.52□□□□□ -0.41
CLDN2-201ENST00000336803 INSRP06213 1382 aa12.51□□□□□ -0.41
CLDN2-201ENST00000336803 CFAP70Q5T0N1 1121 aa12.51□□□□□ -0.41
CLDN2-201ENST00000336803 C14orf93Q9H972 538 aaKnown RBP12.51□□□□□ -0.41
CLDN2-201ENST00000336803 PANK3Q9H999 370 aa12.5□□□□□ -0.41
CLDN2-201ENST00000336803 TMEM131LA2VDJ0 1609 aa12.5□□□□□ -0.41
CLDN2-201ENST00000336803 SLC52A1Q9NWF4 448 aa12.5□□□□□ -0.41
CLDN2-201ENST00000336803 ERVK-7P63135 1459 aa12.5□□□□□ -0.41
CLDN2-201ENST00000336803 NPC1L1Q9UHC9 1359 aa12.49□□□□□ -0.41
CLDN2-201ENST00000336803 NLRP13Q86W25 1043 aa12.48□□□□□ -0.41
CLDN2-201ENST00000336803 ARHGEF40Q8TER5 1519 aa12.48□□□□□ -0.41
CLDN2-201ENST00000336803 TMC1Q8TDI8 760 aa12.48□□□□□ -0.41
CLDN2-201ENST00000336803 QRICH2Q9H0J4 1663 aa12.46□□□□□ -0.41
CLDN2-201ENST00000336803 MYO5BQ9ULV0 1848 aa12.46□□□□□ -0.42
CLDN2-201ENST00000336803 ASXL1Q8IXJ9 1541 aa12.46□□□□□ -0.42
CLDN2-201ENST00000336803 VGFO15240 615 aaPredicted RBP12.45□□□□□ -0.42
CLDN2-201ENST00000336803 FKBP8Q14318 412 aa12.45□□□□□ -0.42
CLDN2-201ENST00000336803 SPATA31D1Q6ZQQ2 1576 aa12.45□□□□□ -0.42
CLDN2-201ENST00000336803 SMG6Q86US8 1419 aaKnown RBP12.45□□□□□ -0.42
CLDN2-201ENST00000336803 IDI1Q13907 227 aa12.45□□□□□ -0.42
CLDN2-201ENST00000336803 ARHGEF28Q8N1W1 1705 aaKnown RBP12.44□□□□□ -0.42
CLDN2-201ENST00000336803 NEFLP07196 543 aa12.44□□□□□ -0.42
CLDN2-201ENST00000336803 CLTCQ00610 1675 aaKnown RBP12.44□□□□□ -0.42
CLDN2-201ENST00000336803 CHGAP10645 457 aaKnown RBP12.44□□□□□ -0.42
CLDN2-201ENST00000336803 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
CLDN2-201ENST00000336803 ERICH6BQ5W0A0 696 aa12.43□□□□□ -0.42
CLDN2-201ENST00000336803 PUS7Q96PZ0 661 aaKnown RBP12.43□□□□□ -0.42
CLDN2-201ENST00000336803 CENPJQ9HC77 1338 aaPredicted RBP12.43□□□□□ -0.42
CLDN2-201ENST00000336803 BLMP54132 1417 aaPredicted RBP12.41□□□□□ -0.42
CLDN2-201ENST00000336803 KNSTRNQ9Y448 316 aa12.41□□□□□ -0.42
CLDN2-201ENST00000336803 USP32Q8NFA0 1604 aa12.4□□□□□ -0.42
CLDN2-201ENST00000336803 CC2D1BQ5T0F9 858 aaKnown RBP12.39□□□□□ -0.43
CLDN2-201ENST00000336803 NUDCQ9Y266 331 aa12.37□□□□□ -0.43
CLDN2-201ENST00000336803 RNF123Q5XPI4 1314 aa12.37□□□□□ -0.43
CLDN2-201ENST00000336803 PPP2R1AP30153 589 aa12.36□□□□□ -0.43
CLDN2-201ENST00000336803 A2ML1A8K2U0 1454 aa12.36□□□□□ -0.43
CLDN2-201ENST00000336803 TULP4Q9NRJ4 1543 aa12.36□□□□□ -0.43
CLDN2-201ENST00000336803 FBXO31Q5XUX0 539 aaPredicted RBP12.36□□□□□ -0.43
CLDN2-201ENST00000336803 TRAK1Q9UPV9 953 aa12.36□□□□□ -0.43
CLDN2-201ENST00000336803 ALKQ9UM73 1620 aa12.36□□□□□ -0.43
CLDN2-201ENST00000336803 TMEM132EQ6IEE7 984 aa12.36□□□□□ -0.43
CLDN2-201ENST00000336803 SETD1AO15047 1707 aaKnown RBP12.35□□□□□ -0.43
CLDN2-201ENST00000336803 PTPRMP28827 1452 aa12.35□□□□□ -0.43
CLDN2-201ENST00000336803 CARD14Q9BXL6 1004 aa12.35□□□□□ -0.43
CLDN2-201ENST00000336803 PDE3BQ13370 1112 aa12.34□□□□□ -0.43
CLDN2-201ENST00000336803 DLC1Q96QB1 1528 aa12.33□□□□□ -0.44
CLDN2-201ENST00000336803 SENP3Q9H4L4 574 aaPredicted RBP12.33□□□□□ -0.44
CLDN2-201ENST00000336803 YTHDC2Q9H6S0 1430 aaKnown RBP12.32□□□□□ -0.44
CLDN2-201ENST00000336803 EVC2Q86UK5 1308 aa12.32□□□□□ -0.44
CLDN2-201ENST00000336803 NINLQ9Y2I6 1382 aa12.32□□□□□ -0.44
CLDN2-201ENST00000336803 ZMYM3Q14202 1370 aa12.31□□□□□ -0.44
CLDN2-201ENST00000336803 NUTM2DQ5VT03 806 aaPredicted RBP12.3□□□□□ -0.44
CLDN2-201ENST00000336803 BCANQ96GW7 911 aa12.3□□□□□ -0.44
CLDN2-201ENST00000336803 DAXXQ9UER7 740 aaPredicted RBP12.3□□□□□ -0.44
CLDN2-201ENST00000336803 RIMS2Q9UQ26 1411 aa12.3□□□□□ -0.44
CLDN2-201ENST00000336803 NRXN3Q9Y4C0 1643 aa12.3□□□□□ -0.44
CLDN2-201ENST00000336803 TSHZ2Q9NRE2 1034 aa12.3□□□□□ -0.44
CLDN2-201ENST00000336803 ANKRD36BQ8N2N9 1353 aa12.29□□□□□ -0.44
CLDN2-201ENST00000336803 SENP3-EIF4A1A0A087X0R7 540 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms