RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 RRBP1Q9P2E9 1410 aaKnown RBP26.87■■□□□ 1.89
CMTM1-204ENST00000336328 PROSER2Q86WR7 435 aaPredicted RBP26.84■■□□□ 1.89
CMTM1-204ENST00000336328 E9PCH4 1651 aa26.83■■□□□ 1.89
CMTM1-204ENST00000336328 RIMS2Q9UQ26 1411 aa26.82■■□□□ 1.88
CMTM1-204ENST00000336328 PLEKHG1Q9ULL1 1385 aa26.82■■□□□ 1.88
CMTM1-204ENST00000336328 TMEM131LA2VDJ0 1609 aa26.81■■□□□ 1.88
CMTM1-204ENST00000336328 ZFYVE9O95405 1425 aa26.81■■□□□ 1.88
CMTM1-204ENST00000336328 TBX22Q9Y458 520 aa26.8■■□□□ 1.88
CMTM1-204ENST00000336328 MYO5BQ9ULV0 1848 aa26.77■■□□□ 1.88
CMTM1-204ENST00000336328 TMEM94Q12767 1356 aa26.76■■□□□ 1.87
CMTM1-204ENST00000336328 ALKQ9UM73 1620 aa26.75■■□□□ 1.87
CMTM1-204ENST00000336328 ILDR2Q71H61 639 aa26.73■■□□□ 1.87
CMTM1-204ENST00000336328 NKTRP30414 1462 aaKnown RBP26.72■■□□□ 1.87
CMTM1-204ENST00000336328 NAIPQ13075 1403 aa26.72■■□□□ 1.87
CMTM1-204ENST00000336328 SENP3Q9H4L4 574 aaPredicted RBP26.71■■□□□ 1.87
CMTM1-204ENST00000336328 XIRP1Q702N8 1843 aaKnown RBP26.71■■□□□ 1.87
CMTM1-204ENST00000336328 TRIM52Q96A61 297 aa26.7■■□□□ 1.86
CMTM1-204ENST00000336328 NUTM2DQ5VT03 806 aaPredicted RBP26.69■■□□□ 1.86
CMTM1-204ENST00000336328 PIK3R4Q99570 1358 aa26.69■■□□□ 1.86
CMTM1-204ENST00000336328 FAM135BQ49AJ0 1406 aa26.68■■□□□ 1.86
CMTM1-204ENST00000336328 ZNF326Q5BKZ1 582 aaKnown RBP26.68■■□□□ 1.86
CMTM1-204ENST00000336328 MSH6P52701 1360 aa26.68■■□□□ 1.86
CMTM1-204ENST00000336328 CHD2O14647 1828 aaKnown RBP26.67■■□□□ 1.86
CMTM1-204ENST00000336328 NWD1Q149M9 1564 aa26.67■■□□□ 1.86
CMTM1-204ENST00000336328 SOCS7O14512 581 aa26.65■■□□□ 1.86
CMTM1-204ENST00000336328 SPHKAPQ2M3C7 1700 aa26.65■■□□□ 1.86
CMTM1-204ENST00000336328 HFM1A2PYH4 1435 aa26.65■■□□□ 1.86
CMTM1-204ENST00000336328 NCOA3Q9Y6Q9 1424 aa26.65■■□□□ 1.86
CMTM1-204ENST00000336328 RBM33Q96EV2 1170 aaKnown RBP26.64■■□□□ 1.86
CMTM1-204ENST00000336328 DIP2AQ14689 1571 aa26.63■■□□□ 1.85
CMTM1-204ENST00000336328 SLC4A1APQ9BWU0 796 aaKnown RBP26.61■■□□□ 1.85
CMTM1-204ENST00000336328 ADAMTS13Q76LX8 1427 aa26.61■■□□□ 1.85
CMTM1-204ENST00000336328 C14orf37Q86TY3 774 aa26.6■■□□□ 1.85
CMTM1-204ENST00000336328 SLAIN2Q9P270 581 aa26.6■■□□□ 1.85
CMTM1-204ENST00000336328 PHF23Q9BUL5 403 aaPredicted RBP26.59■■□□□ 1.85
CMTM1-204ENST00000336328 AMOTL2Q9Y2J4 779 aa26.58■■□□□ 1.85
CMTM1-204ENST00000336328 MED1Q15648 1581 aaPredicted RBP26.57■■□□□ 1.84
CMTM1-204ENST00000336328 ACIN1Q9UKV3 1341 aaKnown RBP26.57■■□□□ 1.84
CMTM1-204ENST00000336328 C19orf44Q9H6X5 657 aa26.56■■□□□ 1.84
CMTM1-204ENST00000336328 TRPM2O94759 1503 aa26.55■■□□□ 1.84
CMTM1-204ENST00000336328 CADPS2Q86UW7 1296 aa26.54■■□□□ 1.84
CMTM1-204ENST00000336328 VGFO15240 615 aaPredicted RBP26.53■■□□□ 1.84
CMTM1-204ENST00000336328 ATF3P18847 181 aa26.53■■□□□ 1.84
CMTM1-204ENST00000336328 KIF1BO60333 1816 aa26.52■■□□□ 1.84
CMTM1-204ENST00000336328 RPGRIP1LQ68CZ1 1315 aa26.5■■□□□ 1.83
CMTM1-204ENST00000336328 CLTCL1P53675 1640 aa26.49■■□□□ 1.83
CMTM1-204ENST00000336328 ROBO1Q9Y6N7 1651 aa26.48■■□□□ 1.83
CMTM1-204ENST00000336328 SETBP1Q9Y6X0 1596 aa26.48■■□□□ 1.83
CMTM1-204ENST00000336328 PTPRUQ92729 1446 aa26.44■■□□□ 1.82
CMTM1-204ENST00000336328 NEXMIFQ5QGS0 1516 aa26.42■■□□□ 1.82
CMTM1-204ENST00000336328 MPHOSPH9Q99550 1183 aa26.41■■□□□ 1.82
CMTM1-204ENST00000336328 METP08581 1390 aa26.4■■□□□ 1.82
CMTM1-204ENST00000336328 NRXN3Q9Y4C0 1643 aa26.39■■□□□ 1.82
CMTM1-204ENST00000336328 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.39■■□□□ 1.82
CMTM1-204ENST00000336328 DCCP43146 1447 aa26.37■■□□□ 1.81
CMTM1-204ENST00000336328 JCADQ9P266 1359 aa26.36■■□□□ 1.81
CMTM1-204ENST00000336328 CCDC144AA2RUR9 1427 aa26.35■■□□□ 1.81
CMTM1-204ENST00000336328 PHLPP1O60346 1717 aa26.35■■□□□ 1.81
CMTM1-204ENST00000336328 FOXD1Q16676 465 aa26.35■■□□□ 1.81
CMTM1-204ENST00000336328 XRN1Q8IZH2 1706 aaKnown RBP26.34■■□□□ 1.81
CMTM1-204ENST00000336328 SETD5Q9C0A6 1442 aa26.31■■□□□ 1.8
CMTM1-204ENST00000336328 RGL3Q3MIN7 710 aa26.3■■□□□ 1.8
CMTM1-204ENST00000336328 BRINP3Q76B58 766 aa26.29■■□□□ 1.8
CMTM1-204ENST00000336328 RGS17Q9UGC6 210 aaPredicted RBP26.27■■□□□ 1.8
CMTM1-204ENST00000336328 SPATA31A6Q5VVP1 1343 aa26.27■■□□□ 1.8
CMTM1-204ENST00000336328 ANKRD30BQ9BXX2 1392 aa26.27■■□□□ 1.8
CMTM1-204ENST00000336328 ADGRL3Q9HAR2 1447 aa26.26■■□□□ 1.79
CMTM1-204ENST00000336328 PPLO60437 1756 aa26.25■■□□□ 1.79
CMTM1-204ENST00000336328 AHDC1Q5TGY3 1603 aaPredicted RBP26.25■■□□□ 1.79
CMTM1-204ENST00000336328 PTCH1Q13635 1447 aa26.23■■□□□ 1.79
CMTM1-204ENST00000336328 COL16A1Q07092 1604 aaPredicted RBP26.22■■□□□ 1.79
CMTM1-204ENST00000336328 MST1RQ04912 1400 aa26.22■■□□□ 1.79
CMTM1-204ENST00000336328 LRRC59Q96AG4 307 aaKnown RBP26.21■■□□□ 1.79
CMTM1-204ENST00000336328 ADGRF5Q8IZF2 1346 aa26.2■■□□□ 1.79
CMTM1-204ENST00000336328 SPATA31E1Q6ZUB1 1445 aa26.2■■□□□ 1.78
CMTM1-204ENST00000336328 MEX3CQ5U5Q3 659 aaKnown RBP26.19■■□□□ 1.78
CMTM1-204ENST00000336328 PRAG1Q86YV5 1406 aa26.19■■□□□ 1.78
CMTM1-204ENST00000336328 ROBO2Q9HCK4 1378 aa26.19■■□□□ 1.78
CMTM1-204ENST00000336328 SETD1AO15047 1707 aaKnown RBP26.17■■□□□ 1.78
CMTM1-204ENST00000336328 ASXL1Q8IXJ9 1541 aa26.16■■□□□ 1.78
CMTM1-204ENST00000336328 HRCP23327 699 aa26.16■■□□□ 1.78
CMTM1-204ENST00000336328 RAB3GAP2Q9H2M9 1393 aa26.16■■□□□ 1.78
CMTM1-204ENST00000336328 POTEAQ6S8J7 498 aa26.15■■□□□ 1.78
CMTM1-204ENST00000336328 ZNF772Q68DY9 489 aaPredicted RBP26.13■■□□□ 1.77
CMTM1-204ENST00000336328 NALCNQ8IZF0 1738 aa26.13■■□□□ 1.77
CMTM1-204ENST00000336328 STK26Q9P289 416 aa26.12■■□□□ 1.77
CMTM1-204ENST00000336328 SHPRHQ149N8 1683 aa26.12■■□□□ 1.77
CMTM1-204ENST00000336328 C1orf167Q5SNV9 1468 aa26.11■■□□□ 1.77
CMTM1-204ENST00000336328 LRPPRCP42704 1394 aaKnown RBP26.09■■□□□ 1.77
CMTM1-204ENST00000336328 ABCC11Q96J66 1382 aa26.09■■□□□ 1.77
CMTM1-204ENST00000336328 NUTM2BA6NNL0 878 aaPredicted RBP26.09■■□□□ 1.77
CMTM1-204ENST00000336328 NUTM2EB1AL46 878 aaPredicted RBP26.09■■□□□ 1.77
CMTM1-204ENST00000336328 NUTM2AQ8IVF1 878 aaPredicted RBP26.09■■□□□ 1.77
CMTM1-204ENST00000336328 NHSL1Q5SYE7 1610 aa26.08■■□□□ 1.77
CMTM1-204ENST00000336328 SIRT1Q96EB6 747 aa26.08■■□□□ 1.77
CMTM1-204ENST00000336328 C14orf93Q9H972 538 aaKnown RBP26.08■■□□□ 1.77
CMTM1-204ENST00000336328 TMEM132EQ6IEE7 984 aa26.07■■□□□ 1.76
CMTM1-204ENST00000336328 ORAI2Q96SN7 254 aa26.07■■□□□ 1.76
CMTM1-204ENST00000336328 IFT172Q9UG01 1749 aa26.07■■□□□ 1.76
CMTM1-204ENST00000336328 PIK3C2GO75747 1445 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms