RNA–Protein interactions for RNA: ENST00000336292.10

SYNM-202, Transcript of synemin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNM, Length 7,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-202ENST00000336292 PCMTD1Q96MG8 357 aaPredicted RBP22.28■■□□□ 1.16
SYNM-202ENST00000336292 NEUROD6Q96NK8 337 aa22.27■■□□□ 1.16
SYNM-202ENST00000336292 RIC3Q7Z5B4 369 aa22.27■■□□□ 1.16
SYNM-202ENST00000336292 PAXIP1Q6ZW49 1069 aaPredicted RBP22.27■■□□□ 1.15
SYNM-202ENST00000336292 CHMP4CQ96CF2 233 aa22.27■■□□□ 1.15
SYNM-202ENST00000336292 PROSER2Q86WR7 435 aaPredicted RBP22.26■■□□□ 1.15
SYNM-202ENST00000336292 CENPJQ9HC77 1338 aaPredicted RBP22.26■■□□□ 1.15
SYNM-202ENST00000336292 ATP2B2Q01814 1243 aa22.26■■□□□ 1.15
SYNM-202ENST00000336292 EVC2Q86UK5 1308 aa22.26■■□□□ 1.15
SYNM-202ENST00000336292 TMEM132AQ24JP5 1023 aa22.26■■□□□ 1.15
SYNM-202ENST00000336292 L3MBTL2Q969R5 705 aa22.26■■□□□ 1.15
SYNM-202ENST00000336292 ABTB2Q8N961 1025 aa22.25■■□□□ 1.15
SYNM-202ENST00000336292 VGFO15240 615 aaPredicted RBP22.24■■□□□ 1.15
SYNM-202ENST00000336292 CHMP4AQ9BY43 222 aa22.24■■□□□ 1.15
SYNM-202ENST00000336292 HDAC5Q9UQL6 1122 aa22.24■■□□□ 1.15
SYNM-202ENST00000336292 RAB3GAP2Q9H2M9 1393 aa22.24■■□□□ 1.15
SYNM-202ENST00000336292 TMEM132EQ6IEE7 984 aa22.24■■□□□ 1.15
SYNM-202ENST00000336292 RBM5P52756 815 aaKnown RBP eCLIP22.23■■□□□ 1.15
SYNM-202ENST00000336292 ST20-MTHFSA0A0A6YYL1 179 aa22.22■■□□□ 1.15
SYNM-202ENST00000336292 CABP2Q9NPB3 220 aa22.22■■□□□ 1.15
SYNM-202ENST00000336292 PTPRGP23470 1445 aa22.22■■□□□ 1.15
SYNM-202ENST00000336292 CCDC34Q96HJ3 373 aa22.21■■□□□ 1.15
SYNM-202ENST00000336292 FKBP5Q13451 457 aaPredicted RBP22.2■■□□□ 1.14
SYNM-202ENST00000336292 IFIT2P09913 472 aaKnown RBP22.19■■□□□ 1.14
SYNM-202ENST00000336292 TSPYL4Q9UJ04 414 aa22.19■■□□□ 1.14
SYNM-202ENST00000336292 CFAP44Q96MT7 982 aa22.19■■□□□ 1.14
SYNM-202ENST00000336292 CCAR2Q8N163 923 aaKnown RBP22.19■■□□□ 1.14
SYNM-202ENST00000336292 CCDC144AA2RUR9 1427 aa22.19■■□□□ 1.14
SYNM-202ENST00000336292 CCDC18Q5T9S5 1454 aa22.19■■□□□ 1.14
SYNM-202ENST00000336292 MYCNP04198 464 aaPredicted RBP22.18■■□□□ 1.14
SYNM-202ENST00000336292 ANO2Q9NQ90 1003 aa22.18■■□□□ 1.14
SYNM-202ENST00000336292 BICDL1Q6ZP65 573 aa22.18■■□□□ 1.14
SYNM-202ENST00000336292 DIAPH3Q9NSV4 1193 aa22.18■■□□□ 1.14
SYNM-202ENST00000336292 NLRP6P59044 892 aa22.18■■□□□ 1.14
SYNM-202ENST00000336292 RALBP1Q15311 655 aa22.18■■□□□ 1.14
SYNM-202ENST00000336292 GBP4Q96PP9 640 aa22.18■■□□□ 1.14
SYNM-202ENST00000336292 BCL11BQ9C0K0 894 aaPredicted RBP22.18■■□□□ 1.14
SYNM-202ENST00000336292 FMN1Q68DA7 1419 aa22.17■■□□□ 1.14
SYNM-202ENST00000336292 CGNL1Q0VF96 1302 aa22.17■■□□□ 1.14
SYNM-202ENST00000336292 PATL2C9JE40 543 aaKnown RBP22.17■■□□□ 1.14
SYNM-202ENST00000336292 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.17■■□□□ 1.143e-10■■■■■ 153.8
SYNM-202ENST00000336292 CHMP4BP1P59074 171 aa22.17■■□□□ 1.14
SYNM-202ENST00000336292 WASHC4Q2M389 1173 aa22.16■■□□□ 1.14
SYNM-202ENST00000336292 TRIM29Q14134 588 aa22.15■■□□□ 1.14
SYNM-202ENST00000336292 RIPK4P57078 832 aa22.15■■□□□ 1.14
SYNM-202ENST00000336292 TOM1L2Q6ZVM7 507 aa22.15■■□□□ 1.14
SYNM-202ENST00000336292 TXNDC2Q86VQ3 553 aa22.14■■□□□ 1.14
SYNM-202ENST00000336292 ERICH2A1L162 156 aa22.14■■□□□ 1.13
SYNM-202ENST00000336292 MROH2BQ7Z745 1585 aa22.14■■□□□ 1.13
SYNM-202ENST00000336292 DDX58O95786 925 aaKnown RBP22.13■■□□□ 1.13
SYNM-202ENST00000336292 PAF1Q8N7H5 531 aa22.13■■□□□ 1.13
SYNM-202ENST00000336292 G3BP1Q13283 466 aaKnown RBP eCLIP22.12■■□□□ 1.13
SYNM-202ENST00000336292 GGNBP2Q9H3C7 697 aa22.12■■□□□ 1.13
SYNM-202ENST00000336292 TPM3P06753 285 aa22.12■■□□□ 1.13
SYNM-202ENST00000336292 KIF6Q6ZMV9 814 aa22.11■■□□□ 1.13
SYNM-202ENST00000336292 ADAMTS2O95450 1211 aa22.11■■□□□ 1.13
SYNM-202ENST00000336292 SPINK5Q9NQ38 1064 aaPredicted RBP22.11■■□□□ 1.13
SYNM-202ENST00000336292 ZNF219Q9P2Y4 722 aaPredicted RBP22.11■■□□□ 1.13
SYNM-202ENST00000336292 DIAPH1O60610 1272 aaKnown RBP22.1■■□□□ 1.13
SYNM-202ENST00000336292 TRDNQ13061 729 aa22.1■■□□□ 1.13
SYNM-202ENST00000336292 TSR1Q2NL82 804 aaKnown RBP22.1■■□□□ 1.13
SYNM-202ENST00000336292 CPLX1O14810 134 aa22.09■■□□□ 1.13
SYNM-202ENST00000336292 RRP12Q5JTH9 1297 aaKnown RBP22.09■■□□□ 1.13
SYNM-202ENST00000336292 ZFYVE27Q5T4F4 411 aa22.08■■□□□ 1.13
SYNM-202ENST00000336292 SYAP1Q96A49 352 aaPredicted RBP22.08■■□□□ 1.13
SYNM-202ENST00000336292 GRM1Q13255 1194 aa22.08■■□□□ 1.12
SYNM-202ENST00000336292 R3HCC1Q9Y3T6 440 aaKnown RBP22.08■■□□□ 1.12
SYNM-202ENST00000336292 ST18O60284 1047 aa22.07■■□□□ 1.12
SYNM-202ENST00000336292 TPM2P07951 284 aa22.07■■□□□ 1.12
SYNM-202ENST00000336292 PDE3BQ13370 1112 aa22.06■■□□□ 1.12
SYNM-202ENST00000336292 MYL6BP14649 208 aa22.06■■□□□ 1.12
SYNM-202ENST00000336292 COG6Q9Y2V7 657 aa22.06■■□□□ 1.12
SYNM-202ENST00000336292 WWC3Q9ULE0 1092 aa22.04■■□□□ 1.12
SYNM-202ENST00000336292 FAM161AQ3B820 660 aa22.04■■□□□ 1.12
SYNM-202ENST00000336292 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.04■■□□□ 1.12
SYNM-202ENST00000336292 APAF1O14727 1248 aa22.03■■□□□ 1.12
SYNM-202ENST00000336292 CSPP1Q1MSJ5 1256 aa22.03■■□□□ 1.12
SYNM-202ENST00000336292 DNAJC2Q99543 621 aaKnown RBP22.03■■□□□ 1.12
SYNM-202ENST00000336292 FANCD2Q9BXW9 1451 aa22.02■■□□□ 1.12
SYNM-202ENST00000336292 LRRFIP1Q32MZ4 808 aaKnown RBP22.01■■□□□ 1.11
SYNM-202ENST00000336292 SLC26A8Q96RN1 970 aa22.01■■□□□ 1.11
SYNM-202ENST00000336292 CNNM1Q9NRU3 951 aa22.01■■□□□ 1.11
SYNM-202ENST00000336292 KIF3AQ9Y496 699 aa22.01■■□□□ 1.11
SYNM-202ENST00000336292 UACAQ9BZF9 1416 aa22■■□□□ 1.11
SYNM-202ENST00000336292 ZNF644Q9H582 1327 aaPredicted RBP22■■□□□ 1.11
SYNM-202ENST00000336292 GPRASP1Q5JY77 1395 aa22■■□□□ 1.11
SYNM-202ENST00000336292 ZSCAN29Q8IWY8 852 aaPredicted RBP22■■□□□ 1.11
SYNM-202ENST00000336292 CCDC85AQ96PX6 553 aaPredicted RBP22■■□□□ 1.11
SYNM-202ENST00000336292 NAP1L1P55209 391 aaKnown RBP22■■□□□ 1.11
SYNM-202ENST00000336292 ECM2O94769 699 aaPredicted RBP21.99■■□□□ 1.11
SYNM-202ENST00000336292 GOLGA6L1Q8N7Z2 621 aa21.99■■□□□ 1.11
SYNM-202ENST00000336292 VSIG10Q8N0Z9 540 aa21.99■■□□□ 1.11
SYNM-202ENST00000336292 RAPGEF2Q9Y4G8 1499 aa21.99■■□□□ 1.11
SYNM-202ENST00000336292 CABP4P57796 275 aa21.98■■□□□ 1.11
SYNM-202ENST00000336292 RSPH4AQ5TD94 716 aa21.98■■□□□ 1.11
SYNM-202ENST00000336292 ATP2B1P20020 1258 aa21.98■■□□□ 1.11
SYNM-202ENST00000336292 ODF2Q5BJF6 829 aa21.98■■□□□ 1.11
SYNM-202ENST00000336292 CT47A1Q5JQC4 288 aaPredicted RBP21.98■■□□□ 1.11
SYNM-202ENST00000336292 GOLGA6L19H0YKK7 550 aa21.97■■□□□ 1.11
SYNM-202ENST00000336292 CADPSQ9ULU8 1353 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms