RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 HAP1P54257 671 aaPredicted RBP8.29□□□□□ -1.08
HMG20A-201ENST00000336216 ADAMTS8Q9UP79 889 aa8.29□□□□□ -1.08
HMG20A-201ENST00000336216 DENND4BO75064 1496 aaPredicted RBP8.29□□□□□ -1.08
HMG20A-201ENST00000336216 ABCC10Q5T3U5 1492 aa8.29□□□□□ -1.08
HMG20A-201ENST00000336216 USP35Q9P2H5 1018 aa8.28□□□□□ -1.08
HMG20A-201ENST00000336216 FRAT2O75474 233 aaPredicted RBP8.28□□□□□ -1.08
HMG20A-201ENST00000336216 HDGFL2Q7Z4V5 671 aaPredicted RBP8.28□□□□□ -1.08
HMG20A-201ENST00000336216 BACH2Q9BYV9 841 aa8.28□□□□□ -1.08
HMG20A-201ENST00000336216 KDM5BQ9UGL1 1544 aa8.28□□□□□ -1.08
HMG20A-201ENST00000336216 PNISRQ8TF01 805 aaKnown RBP8.28□□□□□ -1.08
HMG20A-201ENST00000336216 GGNBP2Q9H3C7 697 aa8.27□□□□□ -1.08
HMG20A-201ENST00000336216 CABP2Q9NPB3 220 aa8.27□□□□□ -1.08
HMG20A-201ENST00000336216 SLC12A5Q9H2X9 1139 aa8.27□□□□□ -1.09
HMG20A-201ENST00000336216 TAOK2Q9UL54 1235 aa8.27□□□□□ -1.09
HMG20A-201ENST00000336216 ITPRIPQ8IWB1 547 aa8.27□□□□□ -1.09
HMG20A-201ENST00000336216 COG6Q9Y2V7 657 aa8.27□□□□□ -1.09
HMG20A-201ENST00000336216 NCOA1Q15788 1441 aa8.27□□□□□ -1.09
HMG20A-201ENST00000336216 SHANK2Q9UPX8 1470 aa8.27□□□□□ -1.09
HMG20A-201ENST00000336216 WDR7Q9Y4E6 1490 aa8.27□□□□□ -1.09
HMG20A-201ENST00000336216 GCC2Q8IWJ2 1684 aa8.27□□□□□ -1.09
HMG20A-201ENST00000336216 PLCH2O75038 1416 aa8.26□□□□□ -1.09
HMG20A-201ENST00000336216 SMC4Q9NTJ3 1288 aa8.26□□□□□ -1.09
HMG20A-201ENST00000336216 SCAPERQ9BY12 1400 aa8.25□□□□□ -1.09
HMG20A-201ENST00000336216 BECN1Q14457 450 aa8.25□□□□□ -1.09
HMG20A-201ENST00000336216 CDC42BPAQ5VT25 1732 aa8.25□□□□□ -1.09
HMG20A-201ENST00000336216 KIAA1107Q9UPP5 1409 aa8.25□□□□□ -1.09
HMG20A-201ENST00000336216 ZCCHC11Q5TAX3 1644 aaKnown RBP8.25□□□□□ -1.09
HMG20A-201ENST00000336216 SMG6Q86US8 1419 aaKnown RBP8.24□□□□□ -1.09
HMG20A-201ENST00000336216 ADGRL2O95490 1459 aa8.24□□□□□ -1.09
HMG20A-201ENST00000336216 GLIPR1L2Q4G1C9 344 aa8.24□□□□□ -1.09
HMG20A-201ENST00000336216 VGFO15240 615 aaPredicted RBP8.24□□□□□ -1.09
HMG20A-201ENST00000336216 NGDNQ8NEJ9 315 aaKnown RBP8.24□□□□□ -1.09
HMG20A-201ENST00000336216 ASXL2Q76L83 1435 aa8.24□□□□□ -1.09
HMG20A-201ENST00000336216 TERF2IPQ9NYB0 399 aa8.24□□□□□ -1.09
HMG20A-201ENST00000336216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.23□□□□□ -1.09
HMG20A-201ENST00000336216 HMOX1P09601 288 aa8.23□□□□□ -1.09
HMG20A-201ENST00000336216 C20orf194Q5TEA3 1177 aa8.23□□□□□ -1.09
HMG20A-201ENST00000336216 PREX2Q70Z35 1606 aa8.23□□□□□ -1.09
HMG20A-201ENST00000336216 NCLP19338 710 aaKnown RBP8.23□□□□□ -1.09
HMG20A-201ENST00000336216 ARHGEF5Q12774 1597 aa8.23□□□□□ -1.09
HMG20A-201ENST00000336216 MYO5CQ9NQX4 1742 aa8.23□□□□□ -1.09
HMG20A-201ENST00000336216 ADGBQ8N7X0 1667 aa8.23□□□□□ -1.09
HMG20A-201ENST00000336216 MS4A1P11836 297 aa8.23□□□□□ -1.09
HMG20A-201ENST00000336216 NUTM2GQ5VZR2 741 aa8.23□□□□□ -1.09
HMG20A-201ENST00000336216 SLC4A10Q6U841 1118 aa8.23□□□□□ -1.09
HMG20A-201ENST00000336216 CENPJQ9HC77 1338 aaPredicted RBP8.22□□□□□ -1.09
HMG20A-201ENST00000336216 MTHFSP49914 203 aa8.22□□□□□ -1.09
HMG20A-201ENST00000336216 FAM161AQ3B820 660 aa8.22□□□□□ -1.09
HMG20A-201ENST00000336216 SYCP2Q9BX26 1530 aa8.22□□□□□ -1.09
HMG20A-201ENST00000336216 HDGFP51858 240 aaKnown RBP8.21□□□□□ -1.09
HMG20A-201ENST00000336216 NECTIN2Q92692 538 aa8.21□□□□□ -1.09
HMG20A-201ENST00000336216 TTC37Q6PGP7 1564 aa8.21□□□□□ -1.1
HMG20A-201ENST00000336216 RTF1Q92541 710 aaKnown RBP8.21□□□□□ -1.1
HMG20A-201ENST00000336216 EIF3AQ14152 1382 aaKnown RBP8.21□□□□□ -1.1
HMG20A-201ENST00000336216 FANCAO15360 1455 aa8.21□□□□□ -1.1
HMG20A-201ENST00000336216 PANK1Q8TE04 598 aa8.2□□□□□ -1.1
HMG20A-201ENST00000336216 ZNF330Q9Y3S2 320 aaPredicted RBP8.2□□□□□ -1.1
HMG20A-201ENST00000336216 PDE3BQ13370 1112 aa8.2□□□□□ -1.1
HMG20A-201ENST00000336216 CD109Q6YHK3 1445 aa8.2□□□□□ -1.1
HMG20A-201ENST00000336216 ANKRD30BQ9BXX2 1392 aa8.2□□□□□ -1.1
HMG20A-201ENST00000336216 TRIM44Q96DX7 344 aaPredicted RBP8.19□□□□□ -1.1
HMG20A-201ENST00000336216 ADGRL1O94910 1474 aa8.19□□□□□ -1.1
HMG20A-201ENST00000336216 CDC42BPBQ9Y5S2 1711 aa8.19□□□□□ -1.1
HMG20A-201ENST00000336216 MFAP1P55081 439 aaKnown RBP8.19□□□□□ -1.1
HMG20A-201ENST00000336216 VSIG10Q8N0Z9 540 aa8.19□□□□□ -1.1
HMG20A-201ENST00000336216 ARID3AQ99856 593 aa8.19□□□□□ -1.1
HMG20A-201ENST00000336216 FOXD4L1Q9NU39 408 aa8.19□□□□□ -1.1
HMG20A-201ENST00000336216 SAMD9LQ8IVG5 1584 aa8.19□□□□□ -1.1
HMG20A-201ENST00000336216 CGNL1Q0VF96 1302 aa8.19□□□□□ -1.1
HMG20A-201ENST00000336216 EVC2Q86UK5 1308 aa8.19□□□□□ -1.1
HMG20A-201ENST00000336216 PPP2R1AP30153 589 aa8.19□□□□□ -1.1
HMG20A-201ENST00000336216 AMPHP49418 695 aa8.19□□□□□ -1.1
HMG20A-201ENST00000336216 OS9Q13438 667 aaPredicted RBP8.19□□□□□ -1.1
HMG20A-201ENST00000336216 PNNQ9H307 717 aaKnown RBP8.19□□□□□ -1.1
HMG20A-201ENST00000336216 MBD5Q9P267 1494 aa8.19□□□□□ -1.1
HMG20A-201ENST00000336216 CROCC2H7BZ55 1655 aa8.18□□□□□ -1.1
HMG20A-201ENST00000336216 ARAP3Q8WWN8 1544 aa8.18□□□□□ -1.1
HMG20A-201ENST00000336216 BCAR3O75815 825 aa8.18□□□□□ -1.1
HMG20A-201ENST00000336216 CENPQQ7L2Z9 268 aaPredicted RBP8.18□□□□□ -1.1
HMG20A-201ENST00000336216 ZNF428Q96B54 188 aa8.18□□□□□ -1.1
HMG20A-201ENST00000336216 RIPK4P57078 832 aa8.18□□□□□ -1.1
HMG20A-201ENST00000336216 PZPP20742 1482 aa8.18□□□□□ -1.1
HMG20A-201ENST00000336216 TXNDC2Q86VQ3 553 aa8.18□□□□□ -1.1
HMG20A-201ENST00000336216 TCP11L2Q8N4U5 519 aa8.18□□□□□ -1.1
HMG20A-201ENST00000336216 PRAM1Q96QH2 718 aa8.18□□□□□ -1.1
HMG20A-201ENST00000336216 DUOX2Q9NRD8 1548 aa8.17□□□□□ -1.1
HMG20A-201ENST00000336216 EID1Q9Y6B2 187 aa8.17□□□□□ -1.1
HMG20A-201ENST00000336216 SLC26A8Q96RN1 970 aa8.17□□□□□ -1.1
HMG20A-201ENST00000336216 TSR2Q969E8 191 aaKnown RBP8.16□□□□□ -1.1
HMG20A-201ENST00000336216 RTEL1-TNFRSF6BF6WH68 1400 aa8.16□□□□□ -1.1
HMG20A-201ENST00000336216 CSB-PGBD3P0DP91 1061 aa8.16□□□□□ -1.1
HMG20A-201ENST00000336216 FBLN1P23142 703 aa8.16□□□□□ -1.1
HMG20A-201ENST00000336216 PMFBP1Q8TBY8 1022 aa8.16□□□□□ -1.1
HMG20A-201ENST00000336216 ANP32BQ92688 251 aaKnown RBP8.16□□□□□ -1.1
HMG20A-201ENST00000336216 RBM33Q96EV2 1170 aaKnown RBP8.16□□□□□ -1.1
HMG20A-201ENST00000336216 RSPH6AQ9H0K4 717 aa8.16□□□□□ -1.1
HMG20A-201ENST00000336216 RWDD1Q9H446 243 aaPredicted RBP8.16□□□□□ -1.1
HMG20A-201ENST00000336216 ERBINQ96RT1 1412 aa8.16□□□□□ -1.1
HMG20A-201ENST00000336216 IPO8O15397 1037 aaKnown RBP8.16□□□□□ -1.1
HMG20A-201ENST00000336216 HSP90AB1P08238 724 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms