RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 NUP155O75694 1391 aa17.07■□□□□ 0.32
C9orf85-201ENST00000334731 IQGAP1P46940 1657 aa17.07■□□□□ 0.32
C9orf85-201ENST00000334731 UNC13BO14795 1591 aa17.06■□□□□ 0.32
C9orf85-201ENST00000334731 TET3O43151 1660 aa17.04■□□□□ 0.32
C9orf85-201ENST00000334731 TOM1O60784 492 aa17.02■□□□□ 0.32
C9orf85-201ENST00000334731 KDM5AP29375 1690 aaKnown RBP17.01■□□□□ 0.31
C9orf85-201ENST00000334731 ADGRB3O60242 1522 aa17.01■□□□□ 0.31
C9orf85-201ENST00000334731 LRRC7Q96NW7 1537 aa17■□□□□ 0.31
C9orf85-201ENST00000334731 IQGAP3Q86VI3 1631 aa16.99■□□□□ 0.31
C9orf85-201ENST00000334731 PIP4K2BP78356 416 aa16.99■□□□□ 0.31
C9orf85-201ENST00000334731 SLC26A8Q96RN1 970 aa16.99■□□□□ 0.31
C9orf85-201ENST00000334731 CHGAP10645 457 aaKnown RBP16.98■□□□□ 0.31
C9orf85-201ENST00000334731 GCC2Q8IWJ2 1684 aa16.97■□□□□ 0.31
C9orf85-201ENST00000334731 NAIPQ13075 1403 aa16.97■□□□□ 0.31
C9orf85-201ENST00000334731 HDGFP51858 240 aaKnown RBP16.97■□□□□ 0.31
C9orf85-201ENST00000334731 E9PCH4 1651 aa16.97■□□□□ 0.31
C9orf85-201ENST00000334731 STRCP1A6NGW2 1772 aa16.97■□□□□ 0.31
C9orf85-201ENST00000334731 ZFYVE9O95405 1425 aa16.96■□□□□ 0.31
C9orf85-201ENST00000334731 KCNA6P17658 529 aa16.96■□□□□ 0.31
C9orf85-201ENST00000334731 BCANQ96GW7 911 aa16.96■□□□□ 0.31
C9orf85-201ENST00000334731 RIMS2Q9UQ26 1411 aa16.96■□□□□ 0.3
C9orf85-201ENST00000334731 PPP1R15AO75807 674 aaPredicted RBP16.94■□□□□ 0.3
C9orf85-201ENST00000334731 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.94■□□□□ 0.3
C9orf85-201ENST00000334731 TMEM131LA2VDJ0 1609 aa16.94■□□□□ 0.3
C9orf85-201ENST00000334731 PLEKHG1Q9ULL1 1385 aa16.93■□□□□ 0.3
C9orf85-201ENST00000334731 HSPA1LP34931 641 aa16.93■□□□□ 0.3
C9orf85-201ENST00000334731 NUTM2DQ5VT03 806 aaPredicted RBP16.92■□□□□ 0.3
C9orf85-201ENST00000334731 ALKQ9UM73 1620 aa16.92■□□□□ 0.3
C9orf85-201ENST00000334731 HFM1A2PYH4 1435 aa16.91■□□□□ 0.3
C9orf85-201ENST00000334731 DISP3Q9P2K9 1392 aa16.9■□□□□ 0.3
C9orf85-201ENST00000334731 PROSER2Q86WR7 435 aaPredicted RBP16.9■□□□□ 0.3
C9orf85-201ENST00000334731 TBX22Q9Y458 520 aa16.9■□□□□ 0.3
C9orf85-201ENST00000334731 TRIM52Q96A61 297 aa16.89■□□□□ 0.29
C9orf85-201ENST00000334731 TMEM94Q12767 1356 aa16.89■□□□□ 0.29
C9orf85-201ENST00000334731 RBM33Q96EV2 1170 aaKnown RBP16.88■□□□□ 0.29
C9orf85-201ENST00000334731 MYO5BQ9ULV0 1848 aa16.85■□□□□ 0.29
C9orf85-201ENST00000334731 ADAMTS13Q76LX8 1427 aa16.85■□□□□ 0.29
C9orf85-201ENST00000334731 ZNF326Q5BKZ1 582 aaKnown RBP16.84■□□□□ 0.29
C9orf85-201ENST00000334731 SLC4A1APQ9BWU0 796 aaKnown RBP16.84■□□□□ 0.29
C9orf85-201ENST00000334731 NWD1Q149M9 1564 aa16.82■□□□□ 0.28
C9orf85-201ENST00000334731 NKTRP30414 1462 aaKnown RBP16.82■□□□□ 0.28
C9orf85-201ENST00000334731 ILDR2Q71H61 639 aa16.81■□□□□ 0.28
C9orf85-201ENST00000334731 TRPM2O94759 1503 aa16.8■□□□□ 0.28
C9orf85-201ENST00000334731 PIK3R4Q99570 1358 aa16.8■□□□□ 0.28
C9orf85-201ENST00000334731 XIRP1Q702N8 1843 aaKnown RBP16.8■□□□□ 0.28
C9orf85-201ENST00000334731 SPHKAPQ2M3C7 1700 aa16.8■□□□□ 0.28
C9orf85-201ENST00000334731 U3KPZ7 1027 aaPredicted RBP16.79■□□□□ 0.28
C9orf85-201ENST00000334731 FAM135BQ49AJ0 1406 aa16.79■□□□□ 0.28
C9orf85-201ENST00000334731 AMOTL2Q9Y2J4 779 aa16.78■□□□□ 0.28
C9orf85-201ENST00000334731 CLTCL1P53675 1640 aa16.78■□□□□ 0.28
C9orf85-201ENST00000334731 MSH6P52701 1360 aa16.77■□□□□ 0.28
C9orf85-201ENST00000334731 DIP2AQ14689 1571 aa16.77■□□□□ 0.27
C9orf85-201ENST00000334731 PTPRUQ92729 1446 aa16.76■□□□□ 0.27
C9orf85-201ENST00000334731 NCOA3Q9Y6Q9 1424 aa16.76■□□□□ 0.27
C9orf85-201ENST00000334731 CHD2O14647 1828 aaKnown RBP16.75■□□□□ 0.27
C9orf85-201ENST00000334731 MPHOSPH9Q99550 1183 aa16.75■□□□□ 0.27
C9orf85-201ENST00000334731 SLAIN2Q9P270 581 aa16.75■□□□□ 0.27
C9orf85-201ENST00000334731 SETBP1Q9Y6X0 1596 aa16.73■□□□□ 0.27
C9orf85-201ENST00000334731 VGFO15240 615 aaPredicted RBP16.73■□□□□ 0.27
C9orf85-201ENST00000334731 C14orf37Q86TY3 774 aa16.73■□□□□ 0.27
C9orf85-201ENST00000334731 C19orf44Q9H6X5 657 aa16.73■□□□□ 0.27
C9orf85-201ENST00000334731 NEXMIFQ5QGS0 1516 aa16.73■□□□□ 0.27
C9orf85-201ENST00000334731 METP08581 1390 aa16.73■□□□□ 0.27
C9orf85-201ENST00000334731 RPGRIP1LQ68CZ1 1315 aa16.72■□□□□ 0.27
C9orf85-201ENST00000334731 SLC4A2P04920 1241 aa16.72■□□□□ 0.27
C9orf85-201ENST00000334731 ACIN1Q9UKV3 1341 aaKnown RBP16.7■□□□□ 0.26
C9orf85-201ENST00000334731 SETD5Q9C0A6 1442 aa16.7■□□□□ 0.26
C9orf85-201ENST00000334731 NRXN3Q9Y4C0 1643 aa16.7■□□□□ 0.26
C9orf85-201ENST00000334731 ATF3P18847 181 aa16.69■□□□□ 0.26
C9orf85-201ENST00000334731 CADPS2Q86UW7 1296 aa16.69■□□□□ 0.26
C9orf85-201ENST00000334731 MED1Q15648 1581 aaPredicted RBP16.68■□□□□ 0.26
C9orf85-201ENST00000334731 CCDC144AA2RUR9 1427 aa16.67■□□□□ 0.26
C9orf85-201ENST00000334731 KIF1BO60333 1816 aa16.66■□□□□ 0.26
C9orf85-201ENST00000334731 SOCS7O14512 581 aa16.66■□□□□ 0.26
C9orf85-201ENST00000334731 RGL3Q3MIN7 710 aa16.66■□□□□ 0.26
C9orf85-201ENST00000334731 ROBO1Q9Y6N7 1651 aa16.65■□□□□ 0.26
C9orf85-201ENST00000334731 RAB3GAP2Q9H2M9 1393 aa16.64■□□□□ 0.25
C9orf85-201ENST00000334731 SPATA31E1Q6ZUB1 1445 aa16.63■□□□□ 0.25
C9orf85-201ENST00000334731 XRN1Q8IZH2 1706 aaKnown RBP16.63■□□□□ 0.25
C9orf85-201ENST00000334731 ADGRF5Q8IZF2 1346 aa16.62■□□□□ 0.25
C9orf85-201ENST00000334731 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.61■□□□□ 0.25
C9orf85-201ENST00000334731 DCCP43146 1447 aa16.61■□□□□ 0.25
C9orf85-201ENST00000334731 BRINP3Q76B58 766 aa16.6■□□□□ 0.25
C9orf85-201ENST00000334731 ANKRD30BQ9BXX2 1392 aa16.59■□□□□ 0.25
C9orf85-201ENST00000334731 ROBO2Q9HCK4 1378 aa16.59■□□□□ 0.25
C9orf85-201ENST00000334731 HRCP23327 699 aa16.58■□□□□ 0.24
C9orf85-201ENST00000334731 RGS17Q9UGC6 210 aaPredicted RBP16.58■□□□□ 0.24
C9orf85-201ENST00000334731 ADGRL3Q9HAR2 1447 aa16.58■□□□□ 0.24
C9orf85-201ENST00000334731 PTCH1Q13635 1447 aa16.57■□□□□ 0.24
C9orf85-201ENST00000334731 JCADQ9P266 1359 aa16.57■□□□□ 0.24
C9orf85-201ENST00000334731 MST1RQ04912 1400 aa16.56■□□□□ 0.24
C9orf85-201ENST00000334731 PPLO60437 1756 aa16.56■□□□□ 0.24
C9orf85-201ENST00000334731 PRAG1Q86YV5 1406 aa16.55■□□□□ 0.24
C9orf85-201ENST00000334731 SETD1AO15047 1707 aaKnown RBP16.54■□□□□ 0.24
C9orf85-201ENST00000334731 PHLPP1O60346 1717 aa16.53■□□□□ 0.24
C9orf85-201ENST00000334731 TMEM132EQ6IEE7 984 aa16.53■□□□□ 0.24
C9orf85-201ENST00000334731 COL16A1Q07092 1604 aaPredicted RBP16.52■□□□□ 0.24
C9orf85-201ENST00000334731 AHDC1Q5TGY3 1603 aaPredicted RBP16.52■□□□□ 0.24
C9orf85-201ENST00000334731 STK26Q9P289 416 aa16.52■□□□□ 0.24
C9orf85-201ENST00000334731 PIK3C2GO75747 1445 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms