RNA–Protein interactions for RNA: ENST00000334318.10

PTBP3-202, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP3, Length 7,990 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-202ENST00000334318 KTN1Q86UP2 1357 aaKnown RBP7.91□□□□□ -1.14
PTBP3-202ENST00000334318 RCAN3Q9UKA8 241 aa7.91□□□□□ -1.14
PTBP3-202ENST00000334318 CDK11BP21127 795 aaKnown RBP7.91□□□□□ -1.14
PTBP3-202ENST00000334318 MTMR7Q9Y216 660 aa7.91□□□□□ -1.14
PTBP3-202ENST00000334318 AMOTL2Q9Y2J4 779 aa7.91□□□□□ -1.14
PTBP3-202ENST00000334318 CFAP70Q5T0N1 1121 aa7.91□□□□□ -1.14
PTBP3-202ENST00000334318 SYNJ2O15056 1496 aa7.9□□□□□ -1.14
PTBP3-202ENST00000334318 RBM5P52756 815 aaKnown RBP eCLIP7.9□□□□□ -1.14
PTBP3-202ENST00000334318 DDX17Q92841 729 aaKnown RBP7.9□□□□□ -1.14
PTBP3-202ENST00000334318 MS4A1P11836 297 aa7.9□□□□□ -1.15
PTBP3-202ENST00000334318 NBPF8Q3BBV2 869 aa7.89□□□□□ -1.15
PTBP3-202ENST00000334318 NBPF14Q5TI25 921 aa7.89□□□□□ -1.15
PTBP3-202ENST00000334318 EVC2Q86UK5 1308 aa7.89□□□□□ -1.15
PTBP3-202ENST00000334318 RALBP1Q15311 655 aa7.89□□□□□ -1.15
PTBP3-202ENST00000334318 GPR162Q16538 588 aa7.89□□□□□ -1.15
PTBP3-202ENST00000334318 USHBP1Q8N6Y0 703 aa7.89□□□□□ -1.15
PTBP3-202ENST00000334318 KRI1Q8N9T8 703 aaKnown RBP7.89□□□□□ -1.15
PTBP3-202ENST00000334318 PNNQ9H307 717 aaKnown RBP7.89□□□□□ -1.15
PTBP3-202ENST00000334318 MPRIPQ6WCQ1 1025 aa7.89□□□□□ -1.15
PTBP3-202ENST00000334318 TOPBP1Q92547 1522 aa7.89□□□□□ -1.15
PTBP3-202ENST00000334318 CCDC144AA2RUR9 1427 aa7.88□□□□□ -1.15
PTBP3-202ENST00000334318 DEKP35659 375 aaKnown RBP7.88□□□□□ -1.15
PTBP3-202ENST00000334318 UACAQ9BZF9 1416 aa7.88□□□□□ -1.15
PTBP3-202ENST00000334318 TATP17735 454 aaPredicted RBP7.88□□□□□ -1.15
PTBP3-202ENST00000334318 KIF15Q9NS87 1388 aa7.88□□□□□ -1.15
PTBP3-202ENST00000334318 PTCD1O75127 700 aaKnown RBP7.88□□□□□ -1.15
PTBP3-202ENST00000334318 CASC1Q6TDU7 716 aa7.88□□□□□ -1.15
PTBP3-202ENST00000334318 CABP4P57796 275 aa7.87□□□□□ -1.15
PTBP3-202ENST00000334318 ZNF622Q969S3 477 aaKnown RBP eCLIP7.87□□□□□ -1.15
PTBP3-202ENST00000334318 KRT28Q7Z3Y7 464 aa7.87□□□□□ -1.15
PTBP3-202ENST00000334318 POLA1P09884 1462 aaPredicted RBP7.87□□□□□ -1.15
PTBP3-202ENST00000334318 CHMP4BQ9H444 224 aaKnown RBP7.87□□□□□ -1.15
PTBP3-202ENST00000334318 CCDC85AQ96PX6 553 aaPredicted RBP7.87□□□□□ -1.15
PTBP3-202ENST00000334318 NLRP13Q86W25 1043 aa7.86□□□□□ -1.15
PTBP3-202ENST00000334318 CHMP4BP1P59074 171 aa7.86□□□□□ -1.15
PTBP3-202ENST00000334318 FAM182BQ5T319 152 aa7.86□□□□□ -1.15
PTBP3-202ENST00000334318 CHMP4CQ96CF2 233 aa7.86□□□□□ -1.15
PTBP3-202ENST00000334318 MSH6P52701 1360 aa7.86□□□□□ -1.15
PTBP3-202ENST00000334318 EIF3AQ14152 1382 aaKnown RBP7.86□□□□□ -1.15
PTBP3-202ENST00000334318 HSP90AB1P08238 724 aaKnown RBP7.86□□□□□ -1.15
PTBP3-202ENST00000334318 PTMAP06454 111 aaKnown RBP7.85□□□□□ -1.15
PTBP3-202ENST00000334318 POLD1P28340 1107 aa7.85□□□□□ -1.15
PTBP3-202ENST00000334318 WWC1Q8IX03 1113 aa7.85□□□□□ -1.15
PTBP3-202ENST00000334318 AK7Q96M32 723 aa7.85□□□□□ -1.15
PTBP3-202ENST00000334318 TFCP2L1Q9NZI6 479 aa7.85□□□□□ -1.15
PTBP3-202ENST00000334318 SPRYD3Q8NCJ5 442 aa7.85□□□□□ -1.15
PTBP3-202ENST00000334318 CABP1Q9NZU7 370 aa7.85□□□□□ -1.15
PTBP3-202ENST00000334318 CDK19Q9BWU1 502 aa7.85□□□□□ -1.15
PTBP3-202ENST00000334318 PRKRIP1Q9H875 184 aaPredicted RBP7.85□□□□□ -1.15
PTBP3-202ENST00000334318 ST20-MTHFSA0A0A6YYL1 179 aa7.85□□□□□ -1.15
PTBP3-202ENST00000334318 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.85□□□□□ -1.15
PTBP3-202ENST00000334318 AKNAQ7Z591 1439 aa7.84□□□□□ -1.15
PTBP3-202ENST00000334318 EXOC5O00471 708 aa7.84□□□□□ -1.15
PTBP3-202ENST00000334318 CCDC27Q2M243 656 aa7.84□□□□□ -1.15
PTBP3-202ENST00000334318 NOL10Q9BSC4 688 aaKnown RBP7.84□□□□□ -1.15
PTBP3-202ENST00000334318 ZNF408Q9H9D4 720 aa7.84□□□□□ -1.15
PTBP3-202ENST00000334318 DHX16O60231 1041 aaKnown RBP7.84□□□□□ -1.16
PTBP3-202ENST00000334318 FAM98CQ17RN3 349 aaKnown RBP7.84□□□□□ -1.16
PTBP3-202ENST00000334318 CNKSR2Q8WXI2 1034 aa7.84□□□□□ -1.16
PTBP3-202ENST00000334318 CLUAP1Q96AJ1 413 aa7.83□□□□□ -1.16
PTBP3-202ENST00000334318 APBA3O96018 575 aa7.83□□□□□ -1.16
PTBP3-202ENST00000334318 HSCBQ8IWL3 235 aa7.83□□□□□ -1.16
PTBP3-202ENST00000334318 USP21Q9UK80 565 aa7.83□□□□□ -1.16
PTBP3-202ENST00000334318 RRS1Q15050 365 aaKnown RBP7.83□□□□□ -1.16
PTBP3-202ENST00000334318 MYL6BP14649 208 aa7.82□□□□□ -1.16
PTBP3-202ENST00000334318 PHF8Q9UPP1 1060 aa7.82□□□□□ -1.16
PTBP3-202ENST00000334318 ZRANB1Q9UGI0 708 aa7.82□□□□□ -1.16
PTBP3-202ENST00000334318 PANK3Q9H999 370 aa7.82□□□□□ -1.16
PTBP3-202ENST00000334318 PDE4CQ08493 712 aa7.82□□□□□ -1.16
PTBP3-202ENST00000334318 STK11IPQ8N1F8 1099 aa7.82□□□□□ -1.16
PTBP3-202ENST00000334318 ZPR1O75312 459 aa7.82□□□□□ -1.16
PTBP3-202ENST00000334318 RIC3Q7Z5B4 369 aa7.82□□□□□ -1.16
PTBP3-202ENST00000334318 NAP1L5Q96NT1 182 aaPredicted RBP7.81□□□□□ -1.16
PTBP3-202ENST00000334318 SLKQ9H2G2 1235 aaPredicted RBP7.81□□□□□ -1.16
PTBP3-202ENST00000334318 CENPJQ9HC77 1338 aaPredicted RBP7.81□□□□□ -1.16
PTBP3-202ENST00000334318 ITPRIPQ8IWB1 547 aa7.81□□□□□ -1.16
PTBP3-202ENST00000334318 PLB1Q6P1J6 1458 aa7.81□□□□□ -1.16
PTBP3-202ENST00000334318 PSDA5PKW4 1024 aaPredicted RBP7.81□□□□□ -1.16
PTBP3-202ENST00000334318 SPINK5Q9NQ38 1064 aaPredicted RBP7.81□□□□□ -1.16
PTBP3-202ENST00000334318 PLCB2Q00722 1185 aa7.81□□□□□ -1.16
PTBP3-202ENST00000334318 CADPS2Q86UW7 1296 aa7.81□□□□□ -1.16
PTBP3-202ENST00000334318 BCL2L13Q9BXK5 485 aa7.81□□□□□ -1.16
PTBP3-202ENST00000334318 CFTRP13569 1480 aa7.81□□□□□ -1.16
PTBP3-202ENST00000334318 IPO8O15397 1037 aaKnown RBP7.81□□□□□ -1.16
PTBP3-202ENST00000334318 CAPN15O75808 1086 aa7.81□□□□□ -1.16
PTBP3-202ENST00000334318 RBM26Q5T8P6 1007 aaKnown RBP7.81□□□□□ -1.16
PTBP3-202ENST00000334318 MSL1Q68DK7 614 aa7.81□□□□□ -1.16
PTBP3-202ENST00000334318 IPO9Q96P70 1041 aaKnown RBP7.81□□□□□ -1.16
PTBP3-202ENST00000334318 RWDD1Q9H446 243 aaPredicted RBP7.81□□□□□ -1.16
PTBP3-202ENST00000334318 ADGRL1O94910 1474 aa7.81□□□□□ -1.16
PTBP3-202ENST00000334318 QTRT2Q9H974 415 aaKnown RBP7.81□□□□□ -1.16
PTBP3-202ENST00000334318 RXRBP28702 533 aa7.8□□□□□ -1.16
PTBP3-202ENST00000334318 DNTTIP2Q5QJE6 756 aaKnown RBP7.8□□□□□ -1.16
PTBP3-202ENST00000334318 BAG6P46379 1132 aa7.8□□□□□ -1.16
PTBP3-202ENST00000334318 KIF6Q6ZMV9 814 aa7.8□□□□□ -1.16
PTBP3-202ENST00000334318 ASXL2Q76L83 1435 aa7.8□□□□□ -1.16
PTBP3-202ENST00000334318 ZNF530Q6P9A1 599 aaPredicted RBP7.8□□□□□ -1.16
PTBP3-202ENST00000334318 PRM3Q9NNZ6 103 aa7.8□□□□□ -1.16
PTBP3-202ENST00000334318 DENND4BO75064 1496 aaPredicted RBP7.79□□□□□ -1.16
PTBP3-202ENST00000334318 IKQ13123 557 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms