RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 PAK3O75914 559 aaPredicted RBP15.64■□□□□ 0.09
HDAC6-201ENST00000334136 PROSER2Q86WR7 435 aaPredicted RBP15.64■□□□□ 0.09
HDAC6-201ENST00000334136 TNNT2P45379 298 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-201ENST00000334136 CC2D1BQ5T0F9 858 aaKnown RBP15.63■□□□□ 0.09
HDAC6-201ENST00000334136 TERF2IPQ9NYB0 399 aa15.62■□□□□ 0.09
HDAC6-201ENST00000334136 GLI2P10070 1586 aa15.61■□□□□ 0.09
HDAC6-201ENST00000334136 SOX12O15370 315 aa15.61■□□□□ 0.09
HDAC6-201ENST00000334136 WDR43Q15061 677 aaKnown RBP eCLIP15.61■□□□□ 0.09
HDAC6-201ENST00000334136 ADGBQ8N7X0 1667 aa15.61■□□□□ 0.09
HDAC6-201ENST00000334136 CFAP65Q6ZU64 1925 aaKnown RBP15.61■□□□□ 0.09
HDAC6-201ENST00000334136 ADGRF5Q8IZF2 1346 aa15.6■□□□□ 0.09
HDAC6-201ENST00000334136 B4GALNT3Q6L9W6 998 aa15.6■□□□□ 0.09
HDAC6-201ENST00000334136 RPRD2Q5VT52 1461 aaKnown RBP15.59■□□□□ 0.09
HDAC6-201ENST00000334136 CFAP53Q96M91 514 aa15.59■□□□□ 0.09
HDAC6-201ENST00000334136 PRAM1Q96QH2 718 aa15.59■□□□□ 0.09
HDAC6-201ENST00000334136 PZPP20742 1482 aa15.59■□□□□ 0.09
HDAC6-201ENST00000334136 ATF3P18847 181 aa15.58■□□□□ 0.08
HDAC6-201ENST00000334136 NOS1P29475 1434 aa15.57■□□□□ 0.08
HDAC6-201ENST00000334136 HSPA2P54652 639 aa15.57■□□□□ 0.08
HDAC6-201ENST00000334136 MORC1Q86VD1 984 aa15.57■□□□□ 0.08
HDAC6-201ENST00000334136 RTN4Q9NQC3 1192 aaKnown RBP15.56■□□□□ 0.08
HDAC6-201ENST00000334136 CANXP27824 592 aaKnown RBP15.53■□□□□ 0.08
HDAC6-201ENST00000334136 DMRT2Q9Y5R5 561 aa15.53■□□□□ 0.08
HDAC6-201ENST00000334136 MAST1Q9Y2H9 1570 aa15.53■□□□□ 0.08
HDAC6-201ENST00000334136 NPATQ14207 1427 aa15.53■□□□□ 0.08
HDAC6-201ENST00000334136 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.52■□□□□ 0.08
HDAC6-201ENST00000334136 ARXQ96QS3 562 aa15.52■□□□□ 0.08
HDAC6-201ENST00000334136 CABP2Q9NPB3 220 aa15.52■□□□□ 0.08
HDAC6-201ENST00000334136 GCC2Q8IWJ2 1684 aa15.51■□□□□ 0.07
HDAC6-201ENST00000334136 AMOTL2Q9Y2J4 779 aa15.51■□□□□ 0.07
HDAC6-201ENST00000334136 PANK3Q9H999 370 aa15.51■□□□□ 0.07
HDAC6-201ENST00000334136 RIMS2Q9UQ26 1411 aa15.51■□□□□ 0.07
HDAC6-201ENST00000334136 C14orf93Q9H972 538 aaKnown RBP15.5■□□□□ 0.07
HDAC6-201ENST00000334136 PPP4R2Q9NY27 417 aa15.5■□□□□ 0.07
HDAC6-201ENST00000334136 UHRF1BP1Q6BDS2 1440 aa15.5■□□□□ 0.07
HDAC6-201ENST00000334136 NUDCQ9Y266 331 aa15.5■□□□□ 0.07
HDAC6-201ENST00000334136 PLXNC1O60486 1568 aa15.49■□□□□ 0.07
HDAC6-201ENST00000334136 PSME1Q06323 249 aa15.49■□□□□ 0.07
HDAC6-201ENST00000334136 WAPLQ7Z5K2 1190 aa15.49■□□□□ 0.07
HDAC6-201ENST00000334136 COL17A1Q9UMD9 1497 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-201ENST00000334136 DEKP35659 375 aaKnown RBP15.48■□□□□ 0.07
HDAC6-201ENST00000334136 KTN1Q86UP2 1357 aaKnown RBP15.48■□□□□ 0.07
HDAC6-201ENST00000334136 NCKAP5LQ9HCH0 1330 aa15.47■□□□□ 0.07
HDAC6-201ENST00000334136 KDM5DQ9BY66 1539 aa15.46■□□□□ 0.07
HDAC6-201ENST00000334136 LAS1LQ9Y4W2 734 aaKnown RBP15.46■□□□□ 0.07
HDAC6-201ENST00000334136 NOP58Q9Y2X3 529 aaKnown RBP15.46■□□□□ 0.07
HDAC6-201ENST00000334136 U2SURPO15042 1029 aaKnown RBP15.46■□□□□ 0.06
HDAC6-201ENST00000334136 CDK19Q9BWU1 502 aa15.46■□□□□ 0.06
HDAC6-201ENST00000334136 ESCO1Q5FWF5 840 aa15.45■□□□□ 0.06
HDAC6-201ENST00000334136 RBM33Q96EV2 1170 aaKnown RBP15.45■□□□□ 0.06
HDAC6-201ENST00000334136 A0A0G2JS52 829 aa15.44■□□□□ 0.06
HDAC6-201ENST00000334136 KIF7Q2M1P5 1343 aa15.44■□□□□ 0.06
HDAC6-201ENST00000334136 MAP3K4Q9Y6R4 1608 aa15.43■□□□□ 0.06
HDAC6-201ENST00000334136 PMFBP1Q8TBY8 1022 aa15.43■□□□□ 0.06
HDAC6-201ENST00000334136 CGNL1Q0VF96 1302 aa15.42■□□□□ 0.06
HDAC6-201ENST00000334136 CCDC7Q96M83 1385 aa15.42■□□□□ 0.06
HDAC6-201ENST00000334136 RALBP1Q15311 655 aa15.41■□□□□ 0.06
HDAC6-201ENST00000334136 DIP2CQ9Y2E4 1556 aa15.41■□□□□ 0.06
HDAC6-201ENST00000334136 COG3Q96JB2 828 aa15.41■□□□□ 0.06
HDAC6-201ENST00000334136 ABCC3O15438 1527 aa15.41■□□□□ 0.06
HDAC6-201ENST00000334136 CCER2I3L3R5 266 aa15.4■□□□□ 0.06
HDAC6-201ENST00000334136 SLC12A5Q9H2X9 1139 aa15.4■□□□□ 0.06
HDAC6-201ENST00000334136 TBX22Q9Y458 520 aa15.39■□□□□ 0.05
HDAC6-201ENST00000334136 CABP1Q9NZU7 370 aa15.39■□□□□ 0.05
HDAC6-201ENST00000334136 TMEM2Q9UHN6 1383 aa15.39■□□□□ 0.05
HDAC6-201ENST00000334136 CROCC2H7BZ55 1655 aa15.39■□□□□ 0.05
HDAC6-201ENST00000334136 KDM5CP41229 1560 aa15.39■□□□□ 0.05
HDAC6-201ENST00000334136 CSB-PGBD3P0DP91 1061 aa15.39■□□□□ 0.05
HDAC6-201ENST00000334136 INO80Q9ULG1 1556 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-201ENST00000334136 AMPHP49418 695 aa15.38■□□□□ 0.05
HDAC6-201ENST00000334136 KIDINS220Q9ULH0 1771 aa15.38■□□□□ 0.05
HDAC6-201ENST00000334136 MAPK8IP3Q9UPT6 1336 aa15.38■□□□□ 0.05
HDAC6-201ENST00000334136 LTKP29376 864 aa15.38■□□□□ 0.05
HDAC6-201ENST00000334136 WASHC2AQ641Q2 1341 aa15.38■□□□□ 0.05
HDAC6-201ENST00000334136 CCDC61Q9Y6R9 512 aa15.37■□□□□ 0.05
HDAC6-201ENST00000334136 ERVK-7P63135 1459 aa15.37■□□□□ 0.05
HDAC6-201ENST00000334136 GPRASP1Q5JY77 1395 aa15.37■□□□□ 0.05
HDAC6-201ENST00000334136 NEUROD2Q15784 382 aa15.37■□□□□ 0.05
HDAC6-201ENST00000334136 NUDT16Q96DE0 195 aaKnown RBP15.37■□□□□ 0.05
HDAC6-201ENST00000334136 PRAG1Q86YV5 1406 aa15.36■□□□□ 0.05
HDAC6-201ENST00000334136 ABCA6Q8N139 1617 aa15.36■□□□□ 0.05
HDAC6-201ENST00000334136 ARHGAP31Q2M1Z3 1444 aa15.36■□□□□ 0.05
HDAC6-201ENST00000334136 SCAF11Q99590 1463 aaKnown RBP15.35■□□□□ 0.05
HDAC6-201ENST00000334136 NLRP6P59044 892 aa15.35■□□□□ 0.05
HDAC6-201ENST00000334136 ARHGEF40Q8TER5 1519 aa15.35■□□□□ 0.05
HDAC6-201ENST00000334136 NUTM2GQ5VZR2 741 aa15.34■□□□□ 0.05
HDAC6-201ENST00000334136 PRDM15P57071 1507 aaPredicted RBP15.34■□□□□ 0.05
HDAC6-201ENST00000334136 ATAD2Q6PL18 1390 aa15.34■□□□□ 0.05
HDAC6-201ENST00000334136 WASLO00401 505 aaPredicted RBP15.34■□□□□ 0.05
HDAC6-201ENST00000334136 PIP4K2BP78356 416 aa15.34■□□□□ 0.05
HDAC6-201ENST00000334136 ZNF692Q9BU19 519 aaPredicted RBP15.34■□□□□ 0.05
HDAC6-201ENST00000334136 GGNBP2Q9H3C7 697 aa15.34■□□□□ 0.05
HDAC6-201ENST00000334136 LTV1Q96GA3 475 aaPredicted RBP15.33■□□□□ 0.05
HDAC6-201ENST00000334136 PNNQ9H307 717 aaKnown RBP15.33■□□□□ 0.05
HDAC6-201ENST00000334136 U2AF1L5P0DN76 240 aaPredicted RBP15.33■□□□□ 0.04
HDAC6-201ENST00000334136 KCNA6P17658 529 aa15.33■□□□□ 0.04
HDAC6-201ENST00000334136 U2AF1Q01081 240 aaKnown RBP eCLIP15.33■□□□□ 0.04
HDAC6-201ENST00000334136 AGLP35573 1532 aa15.33■□□□□ 0.04
HDAC6-201ENST00000334136 TET3O43151 1660 aa15.33■□□□□ 0.04
HDAC6-201ENST00000334136 NLRP13Q86W25 1043 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms