RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 CCDC184Q52MB2 194 aa16.33■□□□□ 0.21
VSTM4-202ENST00000332853 ZKSCAN2Q63HK3 967 aa16.33■□□□□ 0.21
VSTM4-202ENST00000332853 KIAA1211Q6ZU35 1233 aa16.33■□□□□ 0.2
VSTM4-202ENST00000332853 DNTTIP2Q5QJE6 756 aaKnown RBP16.32■□□□□ 0.2
VSTM4-202ENST00000332853 NECTIN2Q92692 538 aa16.32■□□□□ 0.2
VSTM4-202ENST00000332853 RUNDC1Q96C34 613 aa16.31■□□□□ 0.2
VSTM4-202ENST00000332853 NOL8Q76FK4 1167 aaKnown RBP16.31■□□□□ 0.2
VSTM4-202ENST00000332853 ANKRD45Q5TZF3 282 aa16.31■□□□□ 0.2
VSTM4-202ENST00000332853 HMMRO75330 724 aa16.29■□□□□ 0.2
VSTM4-202ENST00000332853 CFAP44Q96MT7 982 aa16.29■□□□□ 0.2
VSTM4-202ENST00000332853 RAPGEF3O95398 923 aa16.29■□□□□ 0.2
VSTM4-202ENST00000332853 BRD4O60885 1362 aaPredicted RBP16.29■□□□□ 0.2
VSTM4-202ENST00000332853 PPP2R1AP30153 589 aa16.29■□□□□ 0.2
VSTM4-202ENST00000332853 NUTM2GQ5VZR2 741 aa16.29■□□□□ 0.2
VSTM4-202ENST00000332853 CCDC9Q9Y3X0 531 aaKnown RBP16.29■□□□□ 0.2
VSTM4-202ENST00000332853 CAMSAP2Q08AD1 1489 aa16.29■□□□□ 0.2
VSTM4-202ENST00000332853 MTHFSP49914 203 aa16.28■□□□□ 0.2
VSTM4-202ENST00000332853 ZNF608Q9ULD9 1512 aaPredicted RBP16.28■□□□□ 0.2
VSTM4-202ENST00000332853 TULP1O00294 542 aaPredicted RBP16.27■□□□□ 0.2
VSTM4-202ENST00000332853 GOLGA6L4A6NEF3 574 aa16.27■□□□□ 0.2
VSTM4-202ENST00000332853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.27■□□□□ 0.2
VSTM4-202ENST00000332853 FAM161AQ3B820 660 aa16.27■□□□□ 0.19
VSTM4-202ENST00000332853 STAC3Q96MF2 364 aa16.26■□□□□ 0.19
VSTM4-202ENST00000332853 NAP1L5Q96NT1 182 aaPredicted RBP16.26■□□□□ 0.19
VSTM4-202ENST00000332853 GRIN2AQ12879 1464 aa16.26■□□□□ 0.19
VSTM4-202ENST00000332853 EIF2S2P20042 333 aaKnown RBP16.26■□□□□ 0.19
VSTM4-202ENST00000332853 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.26■□□□□ 0.19
VSTM4-202ENST00000332853 PANK1Q8TE04 598 aa16.26■□□□□ 0.19
VSTM4-202ENST00000332853 MAGI1Q96QZ7 1491 aaPredicted RBP16.25■□□□□ 0.19
VSTM4-202ENST00000332853 ABCC5O15440 1437 aa16.25■□□□□ 0.19
VSTM4-202ENST00000332853 SLC12A5Q9H2X9 1139 aa16.25■□□□□ 0.19
VSTM4-202ENST00000332853 PLEKHH2Q8IVE3 1493 aa16.25■□□□□ 0.19
VSTM4-202ENST00000332853 PRAM1Q96QH2 718 aa16.25■□□□□ 0.19
VSTM4-202ENST00000332853 DZIP1LQ8IYY4 767 aaKnown RBP16.23■□□□□ 0.19
VSTM4-202ENST00000332853 NGEFQ8N5V2 710 aa16.23■□□□□ 0.19
VSTM4-202ENST00000332853 PSME1Q06323 249 aa16.23■□□□□ 0.19
VSTM4-202ENST00000332853 C1orf141Q5JVX7 400 aa16.23■□□□□ 0.19
VSTM4-202ENST00000332853 GBP4Q96PP9 640 aa16.23■□□□□ 0.19
VSTM4-202ENST00000332853 C11orf95C9JLR9 678 aaPredicted RBP16.22■□□□□ 0.19
VSTM4-202ENST00000332853 ROCK1Q13464 1354 aa16.22■□□□□ 0.19
VSTM4-202ENST00000332853 AKNAQ7Z591 1439 aa16.22■□□□□ 0.19
VSTM4-202ENST00000332853 RILPL2Q969X0 211 aa16.22■□□□□ 0.19
VSTM4-202ENST00000332853 GORABQ5T7V8 394 aa16.22■□□□□ 0.19
VSTM4-202ENST00000332853 ERBINQ96RT1 1412 aa16.21■□□□□ 0.19
VSTM4-202ENST00000332853 FOXD4L5Q5VV16 416 aaPredicted RBP16.21■□□□□ 0.19
VSTM4-202ENST00000332853 FOXD4L4Q8WXT5 416 aaPredicted RBP16.21■□□□□ 0.19
VSTM4-202ENST00000332853 TAF7LQ5H9L4 462 aa16.21■□□□□ 0.19
VSTM4-202ENST00000332853 GPATCH3Q96I76 525 aa16.21■□□□□ 0.18
VSTM4-202ENST00000332853 L1TD1Q5T7N2 865 aaKnown RBP16.2■□□□□ 0.18
VSTM4-202ENST00000332853 TXNDC2Q86VQ3 553 aa16.2■□□□□ 0.18
VSTM4-202ENST00000332853 KIF14Q15058 1648 aa16.2■□□□□ 0.18
VSTM4-202ENST00000332853 TEFQ10587 303 aa16.2■□□□□ 0.18
VSTM4-202ENST00000332853 TCP11L2Q8N4U5 519 aa16.2■□□□□ 0.18
VSTM4-202ENST00000332853 DDX19BQ9UMR2 479 aa16.19■□□□□ 0.18
VSTM4-202ENST00000332853 MAP3K1Q13233 1512 aa16.19■□□□□ 0.18
VSTM4-202ENST00000332853 GLIPR1L2Q4G1C9 344 aa16.19■□□□□ 0.18
VSTM4-202ENST00000332853 CHMP4AQ9BY43 222 aa16.19■□□□□ 0.18
VSTM4-202ENST00000332853 CCDC141Q6ZP82 1450 aa16.19■□□□□ 0.18
VSTM4-202ENST00000332853 THOC2Q8NI27 1593 aaKnown RBP16.18■□□□□ 0.18
VSTM4-202ENST00000332853 ANKRD30BQ9BXX2 1392 aa16.18■□□□□ 0.18
VSTM4-202ENST00000332853 PNISRQ8TF01 805 aaKnown RBP16.18■□□□□ 0.18
VSTM4-202ENST00000332853 CDK11BP21127 795 aaKnown RBP16.17■□□□□ 0.18
VSTM4-202ENST00000332853 CDK19Q9BWU1 502 aa16.16■□□□□ 0.18
VSTM4-202ENST00000332853 TSPYL4Q9UJ04 414 aa16.16■□□□□ 0.18
VSTM4-202ENST00000332853 HSP90B1P14625 803 aaKnown RBP16.15■□□□□ 0.18
VSTM4-202ENST00000332853 GNL2Q13823 731 aaKnown RBP16.15■□□□□ 0.18
VSTM4-202ENST00000332853 CABP1Q9NZU7 370 aa16.15■□□□□ 0.18
VSTM4-202ENST00000332853 EVA1CP58658 441 aa16.15■□□□□ 0.18
VSTM4-202ENST00000332853 FKBP5Q13451 457 aaPredicted RBP16.14■□□□□ 0.17
VSTM4-202ENST00000332853 ISY1Q9ULR0 285 aaKnown RBP16.14■□□□□ 0.17
VSTM4-202ENST00000332853 BCAR3O75815 825 aa16.13■□□□□ 0.17
VSTM4-202ENST00000332853 GNAI1P63096 354 aa16.13■□□□□ 0.17
VSTM4-202ENST00000332853 TSR2Q969E8 191 aaKnown RBP16.13■□□□□ 0.17
VSTM4-202ENST00000332853 LNPKQ9C0E8 428 aa16.13■□□□□ 0.17
VSTM4-202ENST00000332853 PRKAR2BP31323 418 aa16.13■□□□□ 0.17
VSTM4-202ENST00000332853 NLRP6P59044 892 aa16.13■□□□□ 0.17
VSTM4-202ENST00000332853 DRC7Q8IY82 874 aa16.13■□□□□ 0.17
VSTM4-202ENST00000332853 HDAC5Q9UQL6 1122 aa16.12■□□□□ 0.17
VSTM4-202ENST00000332853 MSNP26038 577 aaKnown RBP16.11■□□□□ 0.17
VSTM4-202ENST00000332853 API5Q9BZZ5 524 aaKnown RBP16.11■□□□□ 0.17
VSTM4-202ENST00000332853 ST18O60284 1047 aa16.11■□□□□ 0.17
VSTM4-202ENST00000332853 EXOSC9Q06265 439 aaKnown RBP16.11■□□□□ 0.17
VSTM4-202ENST00000332853 FOXD4L6Q3SYB3 417 aaPredicted RBP16.11■□□□□ 0.17
VSTM4-202ENST00000332853 FOXD4L3Q6VB84 417 aaPredicted RBP16.11■□□□□ 0.17
VSTM4-202ENST00000332853 C9orf78Q9NZ63 289 aaPredicted RBP16.11■□□□□ 0.17
VSTM4-202ENST00000332853 TTC5Q8N0Z6 440 aa16.1■□□□□ 0.17
VSTM4-202ENST00000332853 NCOA1Q15788 1441 aa16.1■□□□□ 0.17
VSTM4-202ENST00000332853 KIF16BQ96L93 1317 aa16.09■□□□□ 0.17
VSTM4-202ENST00000332853 FANCIQ9NVI1 1328 aa16.09■□□□□ 0.17
VSTM4-202ENST00000332853 PTPRKQ15262 1439 aa16.09■□□□□ 0.17
VSTM4-202ENST00000332853 ABTB2Q8N961 1025 aa16.09■□□□□ 0.17
VSTM4-202ENST00000332853 GOLGA6L3A6NEY3 463 aa16.08■□□□□ 0.17
VSTM4-202ENST00000332853 GOLGA6L6A8MZA4 724 aa16.08■□□□□ 0.16
VSTM4-202ENST00000332853 CTTNBP2Q8WZ74 1663 aa16.07■□□□□ 0.16
VSTM4-202ENST00000332853 ESCO1Q5FWF5 840 aa16.07■□□□□ 0.16
VSTM4-202ENST00000332853 C1orf115Q9H7X2 142 aa16.07■□□□□ 0.16
VSTM4-202ENST00000332853 PTMSP20962 102 aa16.07■□□□□ 0.16
VSTM4-202ENST00000332853 SLC26A8Q96RN1 970 aa16.06■□□□□ 0.16
VSTM4-202ENST00000332853 SLC52A1Q9NWF4 448 aa16.06■□□□□ 0.16
VSTM4-202ENST00000332853 AIMP1Q12904 312 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms