RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 ARAP3Q8WWN8 1544 aa24.28■■□□□ 1.48
LYSMD4-201ENST00000332728 EIF2AK4Q9P2K8 1649 aaKnown RBP24.27■■□□□ 1.48
LYSMD4-201ENST00000332728 MROH1Q8NDA8 1641 aa24.27■■□□□ 1.48
LYSMD4-201ENST00000332728 SCAF11Q99590 1463 aaKnown RBP24.26■■□□□ 1.47
LYSMD4-201ENST00000332728 CEP152O94986 1710 aa24.26■■□□□ 1.47
LYSMD4-201ENST00000332728 TET3O43151 1660 aa24.26■■□□□ 1.47
LYSMD4-201ENST00000332728 AMER1Q5JTC6 1135 aaPredicted RBP24.26■■□□□ 1.47
LYSMD4-201ENST00000332728 FAM69CQ0P6D2 419 aa24.25■■□□□ 1.47
LYSMD4-201ENST00000332728 NPATQ14207 1427 aa24.24■■□□□ 1.47
LYSMD4-201ENST00000332728 WDR43Q15061 677 aaKnown RBP eCLIP24.24■■□□□ 1.47
LYSMD4-201ENST00000332728 EXOC6Q8TAG9 804 aa24.24■■□□□ 1.47
LYSMD4-201ENST00000332728 POGZQ7Z3K3 1410 aa24.24■■□□□ 1.47
LYSMD4-201ENST00000332728 SLC12A5Q9H2X9 1139 aa24.23■■□□□ 1.47
LYSMD4-201ENST00000332728 PPRC1Q5VV67 1664 aaKnown RBP24.23■■□□□ 1.47
LYSMD4-201ENST00000332728 CARD14Q9BXL6 1004 aa24.23■■□□□ 1.47
LYSMD4-201ENST00000332728 DEPDC5O75140 1603 aa24.23■■□□□ 1.47
LYSMD4-201ENST00000332728 RCAN3Q9UKA8 241 aa24.22■■□□□ 1.47
LYSMD4-201ENST00000332728 FBXO31Q5XUX0 539 aaPredicted RBP24.22■■□□□ 1.47
LYSMD4-201ENST00000332728 YEATS2Q9ULM3 1422 aa24.2■■□□□ 1.46
LYSMD4-201ENST00000332728 SKAP1Q86WV1 359 aa24.19■■□□□ 1.46
LYSMD4-201ENST00000332728 MROH2AA6NES4 1674 aa24.18■■□□□ 1.46
LYSMD4-201ENST00000332728 CDCA8Q53HL2 280 aa24.18■■□□□ 1.46
LYSMD4-201ENST00000332728 RNF17Q9BXT8 1623 aaKnown RBP24.18■■□□□ 1.46
LYSMD4-201ENST00000332728 IDI1Q13907 227 aa24.17■■□□□ 1.46
LYSMD4-201ENST00000332728 EFCAB6Q5THR3 1501 aa24.17■■□□□ 1.46
LYSMD4-201ENST00000332728 VWDEQ8N2E2 1590 aa24.17■■□□□ 1.46
LYSMD4-201ENST00000332728 RRP1P56182 461 aaKnown RBP24.16■■□□□ 1.46
LYSMD4-201ENST00000332728 NEUROD2Q15784 382 aa24.16■■□□□ 1.46
LYSMD4-201ENST00000332728 FRMPD1Q5SYB0 1578 aa24.16■■□□□ 1.46
LYSMD4-201ENST00000332728 EIF3AQ14152 1382 aaKnown RBP24.16■■□□□ 1.46
LYSMD4-201ENST00000332728 CENPJQ9HC77 1338 aaPredicted RBP24.16■■□□□ 1.46
LYSMD4-201ENST00000332728 ABCA6Q8N139 1617 aa24.14■■□□□ 1.46
LYSMD4-201ENST00000332728 CABP2Q9NPB3 220 aa24.13■■□□□ 1.45
LYSMD4-201ENST00000332728 IQGAP1P46940 1657 aa24.12■■□□□ 1.45
LYSMD4-201ENST00000332728 LAMC1P11047 1609 aa24.12■■□□□ 1.45
LYSMD4-201ENST00000332728 PLPPR3Q6T4P5 718 aa24.11■■□□□ 1.45
LYSMD4-201ENST00000332728 MSH5O43196 834 aa24.11■■□□□ 1.45
LYSMD4-201ENST00000332728 APAF1O14727 1248 aa24.1■■□□□ 1.45
LYSMD4-201ENST00000332728 C20orf194Q5TEA3 1177 aa24.1■■□□□ 1.45
LYSMD4-201ENST00000332728 KIF1BO60333 1816 aa24.1■■□□□ 1.45
LYSMD4-201ENST00000332728 ERVK-7P63135 1459 aa24.1■■□□□ 1.45
LYSMD4-201ENST00000332728 RRP7AQ9Y3A4 280 aaKnown RBP24.09■■□□□ 1.45
LYSMD4-201ENST00000332728 PLEKHH1Q9ULM0 1364 aa24.09■■□□□ 1.45
LYSMD4-201ENST00000332728 STAG3Q9UJ98 1225 aa24.09■■□□□ 1.45
LYSMD4-201ENST00000332728 MAP3K4Q9Y6R4 1608 aa24.08■■□□□ 1.45
LYSMD4-201ENST00000332728 ERICH6BQ5W0A0 696 aa24.08■■□□□ 1.45
LYSMD4-201ENST00000332728 C14orf93Q9H972 538 aaKnown RBP24.07■■□□□ 1.44
LYSMD4-201ENST00000332728 HECW2Q9P2P5 1572 aa24.07■■□□□ 1.44
LYSMD4-201ENST00000332728 SPINK5Q9NQ38 1064 aaPredicted RBP24.06■■□□□ 1.44
LYSMD4-201ENST00000332728 RNF123Q5XPI4 1314 aa24.06■■□□□ 1.44
LYSMD4-201ENST00000332728 MLH3Q9UHC1 1453 aa24.06■■□□□ 1.44
LYSMD4-201ENST00000332728 MINK1Q8N4C8 1332 aaPredicted RBP24.05■■□□□ 1.44
LYSMD4-201ENST00000332728 TSPOAP1O95153 1857 aa24.05■■□□□ 1.44
LYSMD4-201ENST00000332728 MORC1Q86VD1 984 aa24.04■■□□□ 1.44
LYSMD4-201ENST00000332728 DMRT2Q9Y5R5 561 aa24.04■■□□□ 1.44
LYSMD4-201ENST00000332728 STAC3Q96MF2 364 aa24.03■■□□□ 1.44
LYSMD4-201ENST00000332728 CRBNQ96SW2 442 aa24.03■■□□□ 1.44
LYSMD4-201ENST00000332728 ABCC3O15438 1527 aa24.03■■□□□ 1.44
LYSMD4-201ENST00000332728 ASXL1Q8IXJ9 1541 aa24.03■■□□□ 1.44
LYSMD4-201ENST00000332728 SRPK2P78362 688 aaKnown RBP24.02■■□□□ 1.43
LYSMD4-201ENST00000332728 NSD3Q9BZ95 1437 aa24.02■■□□□ 1.43
LYSMD4-201ENST00000332728 SIGLEC1Q9BZZ2 1709 aa23.99■■□□□ 1.43
LYSMD4-201ENST00000332728 VGFO15240 615 aaPredicted RBP23.98■■□□□ 1.43
LYSMD4-201ENST00000332728 MYOM2P54296 1465 aa23.98■■□□□ 1.43
LYSMD4-201ENST00000332728 BLMP54132 1417 aaPredicted RBP23.98■■□□□ 1.43
LYSMD4-201ENST00000332728 MYOM1P52179 1685 aa23.98■■□□□ 1.43
LYSMD4-201ENST00000332728 ADGRB3O60242 1522 aa23.97■■□□□ 1.43
LYSMD4-201ENST00000332728 PIK3C2GO75747 1445 aa23.97■■□□□ 1.43
LYSMD4-201ENST00000332728 PDE3BQ13370 1112 aa23.97■■□□□ 1.43
LYSMD4-201ENST00000332728 KDM5AP29375 1690 aaKnown RBP23.96■■□□□ 1.43
LYSMD4-201ENST00000332728 DIP2CQ9Y2E4 1556 aa23.95■■□□□ 1.43
LYSMD4-201ENST00000332728 NPM2Q86SE8 214 aaKnown RBP23.95■■□□□ 1.42
LYSMD4-201ENST00000332728 SYNMO15061 1565 aa23.95■■□□□ 1.42
LYSMD4-201ENST00000332728 FBLN1P23142 703 aa23.95■■□□□ 1.42
LYSMD4-201ENST00000332728 GOLGA2Q08379 1002 aa23.95■■□□□ 1.42
LYSMD4-201ENST00000332728 PRAM1Q96QH2 718 aa23.95■■□□□ 1.42
LYSMD4-201ENST00000332728 POGKQ9P215 609 aa23.95■■□□□ 1.42
LYSMD4-201ENST00000332728 DUSP27Q5VZP5 1158 aa23.94■■□□□ 1.42
LYSMD4-201ENST00000332728 GGNBP2Q9H3C7 697 aa23.94■■□□□ 1.42
LYSMD4-201ENST00000332728 MTHFSP49914 203 aa23.93■■□□□ 1.42
LYSMD4-201ENST00000332728 ANP32EQ9BTT0 268 aa23.93■■□□□ 1.42
LYSMD4-201ENST00000332728 LMTK2Q8IWU2 1503 aa23.92■■□□□ 1.42
LYSMD4-201ENST00000332728 NEO1Q92859 1461 aa23.92■■□□□ 1.42
LYSMD4-201ENST00000332728 BCAR3O75815 825 aa23.91■■□□□ 1.42
LYSMD4-201ENST00000332728 WAPLQ7Z5K2 1190 aa23.9■■□□□ 1.42
LYSMD4-201ENST00000332728 CFAP74Q9C0B2 1584 aa23.9■■□□□ 1.42
LYSMD4-201ENST00000332728 CAMSAP1Q5T5Y3 1602 aa23.89■■□□□ 1.42
LYSMD4-201ENST00000332728 IFT172Q9UG01 1749 aa23.88■■□□□ 1.41
LYSMD4-201ENST00000332728 ERICH6Q7L0X2 663 aa23.88■■□□□ 1.41
LYSMD4-201ENST00000332728 EVC2Q86UK5 1308 aa23.87■■□□□ 1.41
LYSMD4-201ENST00000332728 NRXN1Q9ULB1 1477 aa23.87■■□□□ 1.41
LYSMD4-201ENST00000332728 PPM1GO15355 546 aaPredicted RBP23.86■■□□□ 1.41
LYSMD4-201ENST00000332728 ZMYM4Q5VZL5 1548 aa23.86■■□□□ 1.41
LYSMD4-201ENST00000332728 BCL2L13Q9BXK5 485 aa23.86■■□□□ 1.41
LYSMD4-201ENST00000332728 PPLO60437 1756 aa23.85■■□□□ 1.41
LYSMD4-201ENST00000332728 RPGRIP1LQ68CZ1 1315 aa23.85■■□□□ 1.41
LYSMD4-201ENST00000332728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.85■■□□□ 1.41
LYSMD4-201ENST00000332728 ADGRB1O14514 1584 aa23.85■■□□□ 1.41
LYSMD4-201ENST00000332728 U2SURPO15042 1029 aaKnown RBP23.84■■□□□ 1.41
LYSMD4-201ENST00000332728 SLFN5Q08AF3 891 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms