RNA–Protein interactions for RNA: ENST00000332687.10

RLIM-201, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLIM, Length 8,317 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-201ENST00000332687 PRM3Q9NNZ6 103 aa6.11□□□□□ -1.43
RLIM-201ENST00000332687 NCOA2Q15596 1464 aa6.11□□□□□ -1.43
RLIM-201ENST00000332687 TRIM29Q14134 588 aa6.11□□□□□ -1.43
RLIM-201ENST00000332687 GNL3LQ9NVN8 582 aaKnown RBP6.1□□□□□ -1.43
RLIM-201ENST00000332687 TRIM21P19474 475 aaKnown RBP6.1□□□□□ -1.43
RLIM-201ENST00000332687 GOLGA6L1Q8N7Z2 621 aa6.1□□□□□ -1.43
RLIM-201ENST00000332687 SUPT6HQ7KZ85 1726 aaKnown RBP6.1□□□□□ -1.43
RLIM-201ENST00000332687 TPM3P06753 285 aa6.1□□□□□ -1.43
RLIM-201ENST00000332687 KIF6Q6ZMV9 814 aa6.1□□□□□ -1.43
RLIM-201ENST00000332687 XBP1P17861 261 aa6.1□□□□□ -1.43
RLIM-201ENST00000332687 CCDC70Q6NSX1 233 aa6.1□□□□□ -1.43
RLIM-201ENST00000332687 API5Q9BZZ5 524 aaKnown RBP6.1□□□□□ -1.43
RLIM-201ENST00000332687 MAGI1Q96QZ7 1491 aaPredicted RBP6.1□□□□□ -1.43
RLIM-201ENST00000332687 VPS53Q5VIR6 699 aa6.1□□□□□ -1.43
RLIM-201ENST00000332687 ANKRD30BQ9BXX2 1392 aa6.1□□□□□ -1.43
RLIM-201ENST00000332687 EHBP1L1Q8N3D4 1523 aa6.09□□□□□ -1.43
RLIM-201ENST00000332687 GAS2L2Q8NHY3 880 aa6.09□□□□□ -1.43
RLIM-201ENST00000332687 EPRSP07814 1512 aaKnown RBP6.09□□□□□ -1.43
RLIM-201ENST00000332687 BRMS1Q9HCU9 246 aa6.09□□□□□ -1.43
RLIM-201ENST00000332687 C9orf78Q9NZ63 289 aaPredicted RBP6.09□□□□□ -1.43
RLIM-201ENST00000332687 PLEKHO1Q53GL0 409 aaPredicted RBP6.09□□□□□ -1.43
RLIM-201ENST00000332687 DRC7Q8IY82 874 aa6.09□□□□□ -1.43
RLIM-201ENST00000332687 SENP3Q9H4L4 574 aaPredicted RBP6.09□□□□□ -1.43
RLIM-201ENST00000332687 ERC2O15083 957 aa6.08□□□□□ -1.44
RLIM-201ENST00000332687 ITPRIPQ8IWB1 547 aa6.08□□□□□ -1.44
RLIM-201ENST00000332687 PROSER2Q86WR7 435 aaPredicted RBP6.08□□□□□ -1.44
RLIM-201ENST00000332687 HIP1O00291 1037 aa6.08□□□□□ -1.44
RLIM-201ENST00000332687 CENPJQ9HC77 1338 aaPredicted RBP6.08□□□□□ -1.44
RLIM-201ENST00000332687 ZKSCAN1P17029 563 aaPredicted RBP6.08□□□□□ -1.44
RLIM-201ENST00000332687 CFTRP13569 1480 aa6.07□□□□□ -1.44
RLIM-201ENST00000332687 TRIM6-TRIM34B2RNG4 842 aa6.07□□□□□ -1.44
RLIM-201ENST00000332687 E9PSI1 815 aa6.07□□□□□ -1.44
RLIM-201ENST00000332687 SF3A1Q15459 793 aaKnown RBP6.07□□□□□ -1.44
RLIM-201ENST00000332687 SAFBQ15424 915 aaKnown RBP eCLIP6.07□□□□□ -1.44
RLIM-201ENST00000332687 ZNF652Q9Y2D9 606 aa6.07□□□□□ -1.44
RLIM-201ENST00000332687 CASKIN1Q8WXD9 1431 aa6.07□□□□□ -1.44
RLIM-201ENST00000332687 TATP17735 454 aaPredicted RBP6.07□□□□□ -1.44
RLIM-201ENST00000332687 SART3Q15020 963 aaKnown RBP6.07□□□□□ -1.44
RLIM-201ENST00000332687 SPG7Q9UQ90 795 aa6.07□□□□□ -1.44
RLIM-201ENST00000332687 PRG4Q92954 1404 aaPredicted RBP6.07□□□□□ -1.44
RLIM-201ENST00000332687 IPO7O95373 1038 aaKnown RBP6.07□□□□□ -1.44
RLIM-201ENST00000332687 GNAI1P63096 354 aa6.07□□□□□ -1.44
RLIM-201ENST00000332687 REC8O95072 547 aa6.06□□□□□ -1.44
RLIM-201ENST00000332687 G3BP1Q13283 466 aaKnown RBP eCLIP6.06□□□□□ -1.44
RLIM-201ENST00000332687 TPD52L1Q16890 204 aaPredicted RBP6.06□□□□□ -1.44
RLIM-201ENST00000332687 DIAPH1O60610 1272 aaKnown RBP6.06□□□□□ -1.44
RLIM-201ENST00000332687 TOMM22Q9NS69 142 aa6.06□□□□□ -1.44
RLIM-201ENST00000332687 PDIA4P13667 645 aaKnown RBP6.06□□□□□ -1.44
RLIM-201ENST00000332687 MSNP26038 577 aaKnown RBP6.06□□□□□ -1.44
RLIM-201ENST00000332687 TBC1D2BQ9UPU7 963 aa6.06□□□□□ -1.44
RLIM-201ENST00000332687 MYBBP1AQ9BQG0 1328 aaKnown RBP6.06□□□□□ -1.44
RLIM-201ENST00000332687 DHX8Q14562 1220 aaKnown RBP6.06□□□□□ -1.44
RLIM-201ENST00000332687 C11orf95C9JLR9 678 aaPredicted RBP6.06□□□□□ -1.44
RLIM-201ENST00000332687 ERC1Q8IUD2 1116 aa6.06□□□□□ -1.44
RLIM-201ENST00000332687 FAM184AQ8NB25 1140 aa6.06□□□□□ -1.44
RLIM-201ENST00000332687 KCNH5Q8NCM2 988 aa6.06□□□□□ -1.44
RLIM-201ENST00000332687 NINLQ9Y2I6 1382 aa6.06□□□□□ -1.44
RLIM-201ENST00000332687 ZNF287Q9HBT7 754 aa6.06□□□□□ -1.44
RLIM-201ENST00000332687 AKNAQ7Z591 1439 aa6.06□□□□□ -1.44
RLIM-201ENST00000332687 TXNDC2Q86VQ3 553 aa6.05□□□□□ -1.44
RLIM-201ENST00000332687 RAB3GAP2Q9H2M9 1393 aa6.05□□□□□ -1.44
RLIM-201ENST00000332687 KIF14Q15058 1648 aa6.05□□□□□ -1.44
RLIM-201ENST00000332687 DHX37Q8IY37 1157 aaKnown RBP6.05□□□□□ -1.44
RLIM-201ENST00000332687 H3BQV1 296 aa6.05□□□□□ -1.44
RLIM-201ENST00000332687 DESP17661 470 aa6.05□□□□□ -1.44
RLIM-201ENST00000332687 IFFO2Q5TF58 517 aa6.05□□□□□ -1.44
RLIM-201ENST00000332687 DIAPH3Q9NSV4 1193 aa6.05□□□□□ -1.44
RLIM-201ENST00000332687 TRAK1Q9UPV9 953 aa6.05□□□□□ -1.44
RLIM-201ENST00000332687 CCDC141Q6ZP82 1450 aa6.05□□□□□ -1.44
RLIM-201ENST00000332687 CNTLNQ9NXG0 1405 aa6.05□□□□□ -1.44
RLIM-201ENST00000332687 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.04□□□□□ -1.44
RLIM-201ENST00000332687 SYTL4Q96C24 671 aaPredicted RBP6.04□□□□□ -1.44
RLIM-201ENST00000332687 LTV1Q96GA3 475 aaPredicted RBP6.04□□□□□ -1.44
RLIM-201ENST00000332687 RCAN3Q9UKA8 241 aa6.04□□□□□ -1.44
RLIM-201ENST00000332687 KAT6BQ8WYB5 2073 aa6.04□□□□□ -1.44
RLIM-201ENST00000332687 ZSCAN25Q6NSZ9 544 aa6.04□□□□□ -1.44
RLIM-201ENST00000332687 A0A0U1RQG5 324 aaPredicted RBP6.04□□□□□ -1.44
RLIM-201ENST00000332687 IFIT2P09913 472 aaKnown RBP6.04□□□□□ -1.44
RLIM-201ENST00000332687 DDX19BQ9UMR2 479 aa6.04□□□□□ -1.44
RLIM-201ENST00000332687 SNAPC4Q5SXM2 1469 aa6.04□□□□□ -1.44
RLIM-201ENST00000332687 PLB1Q6P1J6 1458 aa6.04□□□□□ -1.44
RLIM-201ENST00000332687 HSPA5P11021 654 aaKnown RBP6.04□□□□□ -1.44
RLIM-201ENST00000332687 PLCB2Q00722 1185 aa6.04□□□□□ -1.44
RLIM-201ENST00000332687 TMOD2Q9NZR1 351 aa6.04□□□□□ -1.44
RLIM-201ENST00000332687 MYO6Q9UM54 1294 aa6.04□□□□□ -1.44
RLIM-201ENST00000332687 SLC4A10Q6U841 1118 aa6.04□□□□□ -1.44
RLIM-201ENST00000332687 TXLNBQ8N3L3 684 aa6.04□□□□□ -1.44
RLIM-201ENST00000332687 ATAD2Q6PL18 1390 aa6.03□□□□□ -1.44
RLIM-201ENST00000332687 PIP4K2AP48426 406 aaPredicted RBP6.03□□□□□ -1.44
RLIM-201ENST00000332687 ZKSCAN2Q63HK3 967 aa6.03□□□□□ -1.44
RLIM-201ENST00000332687 SLF2Q8IX21 1173 aa6.03□□□□□ -1.44
RLIM-201ENST00000332687 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.03□□□□□ -1.44
RLIM-201ENST00000332687 ANKRD50Q9ULJ7 1429 aa6.03□□□□□ -1.44
RLIM-201ENST00000332687 IQGAP2Q13576 1575 aa6.03□□□□□ -1.44
RLIM-201ENST00000332687 CPLX1O14810 134 aa6.03□□□□□ -1.44
RLIM-201ENST00000332687 DHX16O60231 1041 aaKnown RBP6.03□□□□□ -1.44
RLIM-201ENST00000332687 RGS3P49796 1198 aa6.03□□□□□ -1.44
RLIM-201ENST00000332687 CDR1P51861 262 aa6.03□□□□□ -1.44
RLIM-201ENST00000332687 PPP4R3BQ5MIZ7 849 aa6.03□□□□□ -1.44
RLIM-201ENST00000332687 KIAA0586Q9BVV6 1533 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms